NOAA Teacher at Sea Kate Trimlett Aboard R/V Fulmar July 23–29, 2013
Mission: ACCESS (Applied California Current Ecosystem Studies) to monitor ecosystem health in the national marine sanctuaries off the central and northern California
Surface Water Temperature: 58.3 Degrees Fahrenheit
Air Temperature: 55.4 Degrees Fahrenheit
Relative Humidity: 90%
Barometric Pressure: 30.05 in
Science and Technology Log:
ACCESS is a project that contributes to a regional characterization and monitoring of the physical and biological components of the pelagic ecosystem of Cordell Bank, Gulf of the Farallones, and northern Monterey Bay National Marine Sanctuaries. During our cruise we are collecting data in these sanctuaries. Over the last three days I have observed and helped the ACCESS scientists collect physical, chemical, and biological properties of the water, plankton, marine mammals, and sea birds. Each of these are measured by a different ACCESS team of researchers in a different area of the research vessel, R/V Fulmar.
Plankton and water are collected and measured on the back deck of the ship. The water is measured in a few ways. First, a CTD (conductivity, temperature, and depth) and Niskin are lowered into the water between 35- 200 meters depending on the location on the line and depth of the water. The CTD measures the conductivity to calculate salinity, temperature, and relative depth within the water column. The Niskin collects a water sample at the same location as the CTD. These water samples are to tested for pH to measure the acidity of the water. Finally, Dru Devlin and I are collecting a surface water sample for nutrients and a phytoplankton samples for the California Department of Public Health, as part of an early warning program for harmful algal blooms that can impact the shellfish we eat.
This CTD measures conductivity (salinity), temperature, and depth.
There are four different plankton collections. The first collection is with a small hoop net (0.5 meter diameter) used to sample very small plankton, from where foraminifera will be separated later in the lab. Foraminifera shell morphology and the oxygen isotopes of the shell are examined to investigate past and present climates and impacts of acidity on shell formation. Next, a larger hoop net (1 meter diameter) collects samples of plankton in the upper 50 m of the water, which will be used to investigate the abundance, species, reproductive patterns, and locations. When the research vessel was close to the end of the line and the continental shelf, the Tucker Trawl was released to collect three samples of plankton near the bottom. When we processed these samples the majority of the organisms were krill. Finally, Dru Devlin and I collected plankton samples 30 feet below the surface to send to the California Department of Health Services because they are interested in the presence and abundance of species that produce toxins.
Tucker trawl collects krill at depth.
On the top deck, the ACCESS observers watch for marine mammals and sea birds and call them out to the data recorder to log the sightings into a waterproof computer. This data will be used to relate the spatial patterns of bird and mammal distribution with oceanographic patterns and to understand the seasonal changes in the pelagic ecosystem.
These are the ACCESS observers looking for marine mammals and sea birds.
Personal Log:
My favorite sighting so far was the leatherback sea turtle. Seven years ago and last summer I took a group of Berkeley High School students to Costa Rica to participate in a sea turtle conservation project with Ecology Project International. On these trips we saw a female leatherback laying her eggs and a hatchling making its way to the ocean. It was great to see the next stage of development when the leatherback popped its head out of the water several hundred miles from their breeding grounds.
Dru Devlin’s amazing picture of the Leatherback Sea Turtle.
Did you know?
Humpback Whales have bad breath? Yesterday we got to smell it first hand when two humpback whales decided to circle our boat and were close enough for us to smell their breath. It’s like rotting fish and sour milk mixed together.
NOAA Teacher at Sea Log:Deborah Moraga NOAA Ship: Fulmar Cruise Dates: July 20‐28, 2010
Mission: ACCESS (Applied California Current Ecosystem Studies) Geographical area of cruise: Cordell Bank, Gulf of the Farallones and Monterey Bay National Marine Sanctuaries Date: June 21, 2010
The R/V Fulmar
Overview
The R/V Fulmar sets out from the dock early each morning. This ACCESS cruise has 5 members of the scientific team and myself (the NOAA Teacher at Sea.) There are two crew members for a total 8 people onboard.
The three central California National Marine Sanctuaries and the ports where the R/V Fulmar docksApplied California Current Ecosystem StudiesNational Marine Sanctuaries
ACCESS is an acronym for Applied California Current Ecosystem Studies. This is a partnership between PRBO Conservation Science, Cordell Bank National Marine Sanctuary and the Gulf of the Farallones National Marine Sanctuary. These groups of conservation scientists are working together to better understand the impacts that different organisms have on the marine ecosystem off the coast of central California.
Immersion suit for safety
They do this so that policy makers (government groups) have the most accurate data to help them make informed decisions on how the productive waters off the coast can be a resource for us and still protect the wildlife. You can read a more in depth explanation at http://www.accessoceans.org
Flying Bridge
The R/V Fulmar is a 67 foot Marine Grade Aluminum catamaran (a multi hulled vessel.) This vessel can travel 400 miles before refueling and can reach 27 knots (30 miles per hour) with a cruising speed of 22 knots (25.3 miles per hour.) Although that may sound slow compared to the cars we drive… you have to take into account that there can be 10 foot waves to go over out on the ocean.
The Fulmar’s homeport (where the boat ties up to dock most of the time) is in Monterey Bay, CA. For this cruise we will come into port (dock) in Bodega Bay, Sausalito, and Half Moon Bay. Each morning the crew wakes up an hour before the time we start out for the day. They check the oil and look over the engines, start the engines, disconnect the shore power and get the boat ready to sail out for a ten hour day.
Today (July 23, 2010) we left at 0700 (7:00 a.m.) out of Bodega Bay. Bodega Bay is on the coast of Sonoma county, California. It is from Bodega Bay that we will travel offshore to the “lines” that we will be surveying. Today we will survey lines one and two.
Then after the day’s work is done, we will sail into port, tie up to the dock and have dinner. The scientists and crew members sleep on the boat in the berths (bunks) that are located in the hulls of the boat.
Surveys
“Okay, take a survey of the types of pets your classmates have at home. Then create a graph.” How many times have math teachers assigned that assignment and expected that students knew how to survey? Today I received firsthand knowledge of how a survey takes place.
Marine scientist scanning for wildlife
Up on the flying bridge (about 5.5 meters from the surface of the ocean) scientists are surveying birds and marine mammals. There is a protocol that each follows. Here, the protocol is basically a list of agreed upon rules on how to count the marine life seen on the ocean. One researcher inputs the data into a waterproof laptop…imagine chilling at the pool and being able to surf the web! There are other researchers sitting alongside and calling out the types of birds and marine mammals they see. The researchers surveying the birds and mammals use not only their eyes but also binoculars.
Krill collected by the Trucker Trawl
After the researcher spots and identifies the birds or mammals, they call out their findings to the recording scientist in a code like fashion, doing this allows for the data to be inputted faster. The team can travel miles without Krill collected by the Trucker Trawl Researcher recording observations on the flying bridge Pacific White Sided dolphins bow riding seeing any organisms or there may be so many that the scientist at the laptop has a tough time keeping up. In this case the surveying scientist may have to write down their findings and report them when there is a break in the action.
Imagine that you are driving down the highway with your family. You have been asked to count the number humans, cows, horses, goats, dogs, cats, cars or trash on your trip. How would you make sure that your family members didn’t double count and still record all that you see? This is where protocols (instruction/rules) come in. So, let us say that you are behind the driver, and your brother or sister is in the backseat next to the window. There is also a family member in the passenger seat up front (yeah they called ‘shot gun’ before you did.) This is much like the seating arrangement on the flying bridge of the R/V Fulmar.
Researcher recording observations on the flying bridge
So how could you split up the road and area around the road so that you do not count something twice? You could split the area that you see into two parts. Take your left arm and stick it straight out the window. Have your sister/brother stick their right arm out their side window. If we drew an arc from your arm to your sibling’s arm it would be 180 degrees. Of the 180 degree arc, you are responsible for counting everything from your arm to the middle of the windshield. So, you are responsible for 90 degrees and your sibling has the other 90 degrees from the middle of the windshield to their arm.
Pacific White Sided dolphins bow riding
Once you start counting you need to record the data you are collecting. Can you write and count at the same time? Not very well, so we need someone to record the data. There are actually a lot of points of data that you need to enter.
You need to tell the recorder…
• Cue: How did you see the item you are counting?
• Method: Were you searching by eye or using a pair of binoculars?
• Bearing: The angle that the item is from the car as related to the front of the car.
• Reticle: How far the item was from your car when you first observed it (you would use your binoculars for this measurement).
• Which side of the car are you on and who is dong the observing?
• Behavior: What was the organism doing when you spotted it? Was it traveling, feeding or milling (just hanging out)?
Deploying the CTD
You also have to determine the age and sex of the organism. You need to record the species of the organism and how many you observed.
Now that is all for the species above the ground… what would you do for the animals below the road surface? On the R/V Fulmar they collect species from below the surface of the ocean and data about the water. They do this several different ways…
Bringing in the Hoop Net
1. CTD: Conductivity, Temperature, and Depth. This is a tool that records the physical properties of the ocean. It records…
a. Salinity (amount of salt in the water)
b. Temperature (how hot or cold the water is)
c. Depth (how far the instrument travels below the surface)
d. How much chlorophyll is in the water
e. Turbidity (how murky or clear the water is)
f. How much oxygen is in the water
Deploying the Tucker Trawl
2. Hoop Net: Looks like a very heavy hula hoop. Except this hoop has a cone shaped cylinder made of fine mesh attached to it. At the apex of the cone, a small PVC container, called a cod end, is attached. Zooplankton (tiny swimming animals) and some phytoplankton (tiny marine plants) are funneled into the cod end of the net as it is towed behind the boat. When the net comes back to the boat, the researchers take off the cod end and use this sample of organisms.
Collecting data from the CTD
3. Tucker Trawl: Is like three hoop nets attached together. The cool thing about this big net is that the scientists can close each net at different depths. As Map of the transect lines Retrieving the Hoop Net Phytoplankton Net the net is towed behind the boat they “close” each net to capture zooplankton at different depths. The tucker trawl is used primarily to collect krill
Map of the transect lines
Transects
Have you ever lost something in your room? Perhaps it was your homework? The bus is coming and you have to find your binder. So you start tearing your room apart. By the time the bus is five minutes away… you room looks like a disaster and you can’t remember where exactly you have looked and yet, still no binder.
Imagine a group of scientists 30 miles offshore, doing that same type of “looking” for organisms, with the captain piloting (driving) the boat any which way. Just like your binder that was missed when you were looking for it, number and location of organisms in parts of the ocean would be missing from the data set.
Retrieving the Hoop Net
So if you wanted a systematic way to look for your homework that is lost in your room, you would imagine a grid. You would have lines running from one wall to another. These lines would be parallel to each other. You would walk along the line looking for you binder. When you came to the end of the line (at your wall) you would then start on another line. By walking back and forth in your room in this systematic way, you will not miss any part of your room.
Phytoplankton Net
You have just traveled along a transect line. A transect is a path you travel and as you do you are counting and recording data. On the R/V Fulmar, scientists are counting birds, marine mammals, and collecting krill. By counting how many and what kinds of organisms are along the transect line, scientists will be able to calculate the density of organisms in a given area. There are several different types on lines that we survey. There are the near shore transects…which extend 12 kilometers from the shore (that is as long as running back a forth a football field 131 times). Offshore lines are 50 to 60 kilometers from the coast. Imagine how many football fields that would be!
Bow of R/V Fulmar
Density… Take your right hand and put it in your right front pocket of your pants and pull out all the coins you have in your pocket. Looking down at your hand you count 10 dimes. Now do the same for your left hand. You found you have two dimes. The “area” those coins were located is equal… meaning your pockets are the same size. The density of coins in your pockets is greater in your right pocket because there are more coins per square inch than in your left pocket.
Humpback Whale
The researchers on the ACCESS cruise use the data they have collected out in the field (in this case the field is the three central California National Marine Sanctuaries) to calculate the density of the organisms they are researching. They are counting and recording the number of organisms and their location so they can create graphs and maps that show the distribution of those organisms in the waters off the coast.
Taking a surface water sample
Why do they need this information? The data starts to paint a picture of the health of the ecosystem in this part of the world. With that information, they can make suggestions as to how resources are used and how to protect the waters off the California coast. By using data that has been collected over many years, suggestions can be made on how the ocean can still be utilized (used) today while insuring that future generations of humans, marine mammals, birds and krill have the same opportunities.
NOAA Teacher at Sea
Stephen Anderson Onboard NOAA Ship Miller Freeman June 28 July 12, 2009
The CTD Instruments
Mission: Hake Survey Geographic Region: California Date: June 29, 2009
We anchored in Monterey Bay. After putting the anchor down there were several tests that had to be made. The first was to send in SCUBA divers to check our propeller. The second test was to check on the transducers for our sonar. The third was to put over the side the CTD (conductivity, temperature, and density instruments). This instrument is useful not only to tell the composition of the water, but also to determine currents. Included in this set of instruments is an automatic camera that will catch video of the small animals (micro-organisms) at various depths (what the fish eat). The fourth test was to send three balls of different sizes and materials to hang under the boat using what we in Michigan would call salmon downriggers. Dr. Chu, our chief scientist, and Stan Tomich, our engineer, can control these miniature cranes to raise and lower these balls. They can then calibrate (set the readings on the sonar sensors) to make sure they have the correct depth for the fish they will be able to see with the sonar. The sonar array in this boat is accurate to within one centimeter. Later tonight we will weigh anchor to go further south to begin our chase after hake.
Divers over the side to check the propeller and sonar.
For those of you who don’t know hake. This is a cod type of fish that is very important to the fish industry on the west coast of the US and Canada. If you’ve had a fish stick, you’ve probably had hake.
We were visited today by some very interesting animals: several species of jelly fish, several sea lions, a few dolphins, and a mola mola fish which is sometimes called a sun fish.
A Mola Mola, or Sun Fish. This guy was probably 6 feet in length.
NOAA Teacher at Sea
Alex Eilers
Onboard NOAA Ship David Starr Jordan August 21 – September 5, 2008
Teacher at Sea Alex Eilers releasing an XBT
Mission: Leatherback Sea Turtle Research Geographical area of cruise: California Date: September 1, 2008
Science Log
The second week has been absolutely fabulous as we found a leatherback – in fact we found three!!! This week has been all about the turtle: from identifying the biotic and abiotic conditions that define leatherback turtle habitat and foraging grounds, to tracking and tagging – we’ve done it all.
• Abiotic oceanographic data provided by scientific instruments such as XBTs (expendable bathythermographs), CTD (conductivity, temperature and depth), and water samples containing nutrient data to characterize the abiotic foraging habitats of the leatherback turtle.
Alex working with the CTD device
• Net tow samples characterized the biotic conditions such as the jellyfish species prevalent in the turtle diet: moon jellies, sea nettles, and egg yolk jellies.
Alex Eilers measuring a moon jellyEgg yolk jelly with pipefish and larval rex soleTracking the turtles via handheld antennaAerial surveillanceTagging a big leatherback
NOAA Teacher at Sea
Alex Eilers
Onboard NOAA Ship David Starr Jordan August 21 – September 5, 2008
Mission: Leatherback Sea Turtle Research Geographical area of cruise: California Date: August 31, 2008
Alex putting glow sticks on branch line.
August 29 – Longline fishing for swordfish
Today’s major objective was to catch swordfish for tagging using a fishing method called longlining. Longline fishing uses one main line held just below the water’s surface with several buoys. Attached to the main line are several smaller branch lines with hooks and bait. The branch lines extent 42 feet or 7 fathoms into the ocean.
Preparing to launch the longline is quite a sight and it requires a number of individuals, each working in unison. There is a person who baits the hooks on the branch line then hooks it to the main line, another person attaches a glow stick (used to attract the swordfish), and a third person attaches the buoy to the main line. There are also a number of people working behind the scenes sorting lines and working the winch. After all the branch lines are hooked to the main line, the line soaks in the water for several hours – in hopes that a swordfish will take the bait.
Crew setting gear
Reeling in the line took about two hours because the line was 4 miles long and held over 200 hooks. I thought this was an extremely long line but was told that commercial fishing vessels use between 40 to 60 miles of line with thousands of branch lines. Wow!
Unfortunately, we were unable to tag any swordfish but hope to try again on Labor Day. What an incredible experience today has been.
August 30 and 31 – Rock’n and Roll’n
Whoa, Whoa… is about all you heard me say over the past two days. We’re going through a rough patch today – high winds and swells up to 5 or 7 meters – between 15 and 20 feet. We sure were glad the scientific equipment was secured during the first few days – because everything that wasn’t tied down went flying – including chairs, drinks and the crew. The closest thing I could come to describing this experience would be like riding a non-stop Disney ride. The inclinometer reading (an instrument that is use to detect the degrees a boat rolls) recorded a maximum tilt of about 36 degrees. To put thing into perspective, I am now typing with one hand and holding the table with the other. Unfortunately, many of the science projects were cancelled due to high seas. We hope to be in the calmer waters of Monterey Bay area tomorrow.