Jillian Worssam, July 5, 2008

NOAA Teacher at Sea
Jillian Worssam
Onboard U.S. Coast Guard Vessel Healy
July 1 – 30, 2008

Mission: Bering Sea Ecosystem Survey
Geographic Region: Bering Sea, Alaska
Date: July 5, 2008

02becce
A pre-drill brief, to discuss props, expectations and safety issues that the trainers might see. If a real casualty happens during a drill, the ETT would let the individuals who are training take control unless there were difficulties in responding to the casualty. Remember a casualty in this respect does not infer human.

At dinner last night I was invited to meet BECCE, and after a moments confusion I realized I had not been invited to meet a person, but to observe a readiness drill.  BECCE stands for Basic Engineering Casualty Control Exercise and I was on my way to watch as the experienced crew aboard the U.S. Coast Guard Cutter HEALY maintains their skills, and passes that knowledge on to new cadets (students from the CG Academy in New London, CT who are here for a month during their summer break) and enlisted personnel. There is an expression in the engineering department, “Slow it down or shut it down,” and that is what BECCE is all about.  Once a crew member on watch finds a problem it is their responsibility to report it to engineering and then take appropriate action, thus BECCE a drill.

The steps to take when there is a problem or alarm in Engineering are simple: investigate the alarm, take initial action to control the casualty, stabilize the plant and report status to the bridge.
Jet fuel has ruptured, pipe spraying leak...the circle indicates people have started to work on the leak. This Brian Liebrecht part of the ETT
Jet fuel has ruptured, pipe spraying leak…the circle indicates people have started to work on the leak. This Brian Liebrecht part of the ETT

This procedure might sound simple, but if 250 gallons of lube oil is rushing from a punctured pipe individuals can easily get flustered.  That is why BECCEs are such a great idea!  Drill, practice and make sure all personnel are prepared for the advent of anything, and you then have a smoother running vessel.

On a side note, as I learn more about the roles and responsibilities aboard a U.S. Coast Guard Vessel I am constantly stumped by acronyms.  The EOW is in charge of the “plant” during this drill and is being evaluated on his responses to the various “casualties”.

LCDR Petrusa (The officer in charge of all engineering on the ship) is observing and watching protocol, with the results of this drill falling on his shoulders.  Simultaneously MKC Brogan evaluates the EOWs during their drill sets.  How about CWO3 Lyons who is in charge of all machinery technicians, both main propulsion and auxiliary divisions? Do you see what I mean, lots of acronyms, and it gets confusing.   Everyone has collateral duties, and don’t even think you can figure out what an OSG is????  I also learned that there are nicknames as well, you could be a twidget (electronics technicians), or a snipe (who are mechanics), sparky (electricians), all of which are vital positions on the boat.  There is a lot of humor as well with the use of slang, for instance I wonder if anyone knows the difference between a Clean EM and a Dirty EM?
This is a fuel oil leak that has not been engaged...the team is discussing the situation.
This is a fuel oil leak that has not been engaged…the team is discussing the situation.

Expression of the Day: “A Clean Slate” Before we had the technology of the 21st century, and there were no onboard computers, or GPS, vital information such as course and distance were written on slates.  At the end of each watch this information was copied into the ship’s log.  The slate was then…”wiped clean.”

Chief Machinery technician Doug Lambert is addressing the casualty during his BECCE drill, while Chief Machinery Technician John O'Brogan observes and evaluates, as a member of EET team.
Chief Machinery technician Doug Lambert is addressing the casualty during his BECCE drill, while Chief Machinery Technician John O’Brogan observes and evaluates, as a member of EET team.

FOR MY STUDENTS: Can you think of any other nautical expressions we now use in everyday language?

LCDR Petrusa as EO overseas operation of the BECCE exercises. On the computer you see a representation of main diesel generator set number one. Along with all live telemetry (pressure, temp, and speed) represented so that the EOW can at any time see what is going on with the engines.
LCDR Petrusa as EO overseas operation of the BECCE exercises. On the computer you see a representation of main diesel generator set number one. Along with all live telemetry represented so that the EOW can at any time see what is going on with the engines.
Recent academy graduate Lisa Myatt is the newest member of the engineering team. A rarity as a female engineer, Lisa probably represents the less than 10% of the HEALY crew as a woman in the engineering department.
Recent academy graduate Lisa Myatt is the newest member of the engineering team. A rarity as a female engineer, Lisa probably represents the less than 10% of the HEALY crew as a woman in the engineering department.
Petty Officer Hans proof-reads this journal entry to make sure that the information I have given on engineering is correct.
Petty Officer Hans proof-reads this journal entry to make sure that the information I have given on engineering is correct.

Jillian Worssam, July 4, 2008

NOAA Teacher at Sea
Jillian Worssam
Onboard U.S. Coast Guard Vessel Healy
July 1 – 30, 2008

Mission: Bering Sea Ecosystem Survey
Geographic Region: Bering Sea, Alaska
Date: July 4, 2008

Science Log

Today will be my first day as part of the MOCNESS team, so I though you should meet these amazing scientists.

From left to right: Alexei, Nicola, Elizabeth, and Ron, ready to deploy the MOCNESS.
From left to right: Alexei, Nicola, Elizabeth, and Ron, ready to deploy the MOCNESS.

Nicola studies the early life stages of fish and how they are effected by environmental changes, and how these changes affect their ecology.  Nicola works out of the University of Alaska Fairbanks in Juneau. Alexei studies zooplankton ecology with an emphasis on krill (euphausiids).  Alexei also works for the University of Alaska Fairbanks in Seward. Ron is a biochemist who works for NOAA, Auke Bay Lab in Juneau.  Ron studies fish lipid and fatty acid signatures, and looks at the energy stored in a fish’s body.  Ron also blows up fish, but that I will save for a later journal. Elizabeth is a PhD Graduate student for the University of Alaska Fairbanks, where she works with Nicola studying ichthyoplankton, and also looking at drift patterns with data on abundance and distribution of sample populations.

Nicola is blowing air into the flow meter making sure it is working correctly.
Nicola is blowing air into the flow meter making sure it is working correctly.

Before I forget, I guess you should know what “MOCNESS” stands for: Multiple Opening Closing Net Environmental Sampling System.  Quite simply a name for a wonderfully complicated piece of machinery.  The MOCNESS actually can take multiple samples of ichthyoplankton (small fish and different types of plankton) at multiple depths while on the same tow, or station.  There is a nine net capacity so theoretically the team can collect nine different samples at one station.

The scientists stand by as the Healy MST crew uses a wench to raise the MOCNESS prior to releasing it to fish behind the ship.
The scientists stand by as the Healy MST crew uses a wench to raise the MOCNESS prior to releasing it to fish behind the ship.

On a last personal note, I have been handling salt water today, so my hands have the most interesting consistency, dry like finely tanned leather.  I have a feeling that this will be the norm for the next month, and though it is not uncomfortable, it is interesting.

Quote of the Day: I only went out for a walk, and finally concluded to stay out until sundown; for going out, I found, was really going in. -John Muir

FOR MY STUDENTS: Why do you thin it is important to understand more about different types of plankton, where they live, how they travel, and how many there are?

Jillian Worssam, July 3, 2008

NOAA Teacher at Sea
Jillian Worssam
Onboard U.S. Coast Guard Vessel Healy
July 1 – 30, 2008

Mission: Bering Sea Ecosystem Survey
Geographic Region: Bering Sea, Alaska
Date: July 3, 2008

Science Log

We are underway, a tug helped our vessel move away from the dock and we are now heading towards station number one.

Local tug used to get the Healy from the dock.
Local tug used to get the Healy from the dock.

Before we get to our first sampling point, which will be a CTD deployment and Mocness, I would like to give you a little background on some of the science that will be accomplished over the next 30 days.  At first I was told there would be approximately seven concurrent scientific data sampling experiments being conducted, well that estimate is off by a bit,  The scientists on board are studying:

Physical Oceanography and water circulation Hydrography Carbon productivity Nitrogen uptake and cycling Particle flux Iron Analysis Euphausiid and microzooplankton Euphausiid rate measurements Organic tracers and trophic transfer Ichthyoplankton Microzooplankton grazing Benthic biogeochemical fluxes Bird distribution and abundance Marine mammal observation: right whale observer Bio-optical and phyto plankton variations Water column bio-optics and phytoplankton  characteristics.

Alexie and team working on deployment of the Mocness.
Alexie and team working on deployment of the Mocness.

Phew, I am out of breath, and to be honest hope to by the end of the cruise to know more about each and every one of these scientific studies, how to pronounce their names, and explain their importance to this amazing ecosystem called the Bering Sea!

Stop in tomorrow to learn more about quantitative zooplankton studies with Alexei Pinchuk.  We will use the Mocness collect samples and well, I can’t tell it all today, there needs to be some surprises for tomorrow.

Here is today's photo challenge, what is this item, and what do you think it is used for?
Here is today’s photo challenge, what is this item, and what do you think it is used for?

Quote of the Day: On the path that leads to nowhere I have sometimes found my soul.  Corrine Roosevelt Robins

FOR MY STUDENTS: How long do you think you can go without sleep and still function effectively?

Scott Donnelly, April 20, 2008

NOAA Teacher at Sea
Scott Donnelly
Onboard NOAA Ship McArthur II
April 20-27, 2008

Mission: Assembly of Science Team and Movement of Science Gear/Equipment
Geographical Area: Coos Bay to Astoria, Oregon
Date: April 20, 2008

NOAA TAS Scott Donnelly (green helmet) and fellow science team member Bob Sleeth collecting zooplankton
NOAA TAS Scott Donnelly (green helmet) and fellow science team member Bob Sleeth collecting zooplankton

Science and Technology Log 

The start of the cruise has been delayed one day due to the rough, unpredictable, and potentially dangerous waters where the mighty eastward flowing Columbia River and its massive volume of freshwater collides head on with the cold, salty water of the vast Pacific Ocean. Where this water slugfest happens, sands bars shift repeatedly this way and that way as the pushing and shoving between the massive volumes of sea and freshwater continues without interruption. At low tide the sand bars are easily seen; they are numerous and of great area and irregular in shape.

On account of the delay, most of the day was spent making sure instruments worked properly and non-instrument equipment was organized to maximize efficiency. Perhaps though more importantly, the delay gave the eleven science team members— most of them complete strangers to one another—extra time to get to know one another. This is important because all of us will be shipboard for eight days confined to quaint sleeping quarters, working, eating, relaxing, playing, and interacting with each other. There’s no escaping once the ship moves away from the dock and goes out to sea. It also gave science team members time to get to know the ship’s crew, who themselves play a key role in the overall success of the mission.

Science team meeting in the dry lab aboard NOAA ship McARTHUR II
Science team meeting in the dry lab aboard NOAA ship McARTHUR II

Communication is a two-way street. From the science team perspective we have to communicate with each other and also with the crew in order to be productive and minimize mistakes. Ocean science truly is an interdisciplinary endeavor that relies on the talents and work ethic of the people involved. This brings me to my next topic. Science is a uniquely human pursuit; good science relies on people. Modern scientific inquiry is all about assembling the best minds and talent possible into a highly productive team. It’s not just about brains though. Personalities and people skills matter too. In fact, they matter a lot. They can make or break a scientific mission. All it takes is an individual with a 60-grit sandpaper personality to upset the ebb and flow of human group dynamics.

Ocean science is all about teamwork!  

In a few hours I’ll see how such dynamics work out on this cruise with this assemblage of people, the youngest being an undergraduate science major and the oldest a retired Silicon Valley engineer. Four of the eleven science team members (myself included) have never been at sea. We don’t know what to expect or, for that matter, think about with respect to what lies ahead this next full week.

After lunch we met as a group with the NOAA Corps officers and reviewed the ship’s rules and regulations. We then had a science team meeting whereby the cruise’s Chief Scientist, Dr. Steven Rumrill, gave a brief overview of the cruise’s scientific mission, discussed shipboard operations, the cruise’s plans and objectives, and the itinerary and the logistics associated with sample collection and data acquisition.

In summary, the science team will measure a number of salient water quality parameters (see my log April 19, 2008) and collect samples of marine invertebrates (boneless organisms) along the Oregon Continental Shelf (OCS) at varying depths and distances from the coast over the period of 20-27 April 2008. This time of year was chosen because it precedes the development of an upwelling/hypoxia event that is anticipated to develop later in the summer of 2008. (The oceanographic terms upwelling and hypoxia will be discussed later in this log.) Water and biological sampling will continue non-stop for 24hrs per day, every day of the cruise except the last day when preparations are made for eventual docking.

Each work shift is four hours in length and is followed by an eight hour rest & relaxation (R&R) period. My assigned shift mate is Bob Sleeth and the team leader Ali Helms, a research cruise veteran who works full-time under Chief Scientist Steve Rumrill at South Slough National Estuarine Research Reserve (SSNERR). Ali will work the CTD controls in the dry lab while Bob and I will collect water samples from the CTD Niskin bottles and also zooplankton and phytoplankton using specially designed nets deployed starboard (right side of ship) to various depths and eventually retrieved after a certain length of time. Our daily shift schedule is from 0100 to 0500 (1am to 5am) and 1300 to 1700 (1pm to 5pm) with an eight hour R&R period in between each shift. Once started operations will continue on a 24-hour basis without interruption unless for inclement weather or seas.

The map to the right shows the major geographical regions where sampling will occur along the continental shelf of Oregon between Astoria (46O10’N, 123O50’W) and Cape Blanco (42O51’N, 124O41’W). At each sampling site biological (phytoplankton and zooplankton) samples will be collected at varying depths using special collection nets of varying mesh and design.

The operating area for this cruise is the nearshore region of the Oregon Continental Shelf (OCS), between Astoria (Cape Falcon 45o46’N, 124o40’W) and Cape Blanco (42o51’N, 124o41’W) at sites or stations ranging from 3 to 55 miles off the coast. Multiple sampling stations are scheduled along the Newport Hydrographic (NH) Line (maroon line), the Umpqua Estuary Line (green line), the Coos Bay Line (blue line), and the Coquille Estuary Line (orange line). The number of sampling stations is indicated by the number adjacent each colored line. Sampling also will take place at multiple sites (26 total) south of the Columbia River-Pacific Ocean interface and north of the NH Line as indicated by the purple circle on the map at right. Weather permitting, in total there are 59 sites where chemical and biological characterization of the water column will be carried out.

Previously I mentioned the oceanographic terms upwelling. So what is upwelling? A short definition is that upwelling is a vertical water circulation pattern in which deep, cold and typically nutrient- rich seawater moves upward to the ocean surface. Upwelling occurs in a number of places around the world on the western side of continents. It is caused either by strong, consistent winds blowing parallel to the shore as is the case on the Oregon coast in the summer months, or by deep, cold ocean currents smashing into the continental landmass and having no where to go but up as is the case in the southern hemisphere off southern Chile (South America) and Namibia (southwestern Africa). During summer in the northeastern Pacific, a clockwise rotating, high-pressure air system is positioned off the Washington-Oregon coast. Strong northerly winds blow south parallel to the Washington-Oregon coasts pushing the surface water towards the equator. At the southernmost region of the high pressure air system the water is pushed out to sea, away from the Oregon coast. As the surface water is pushed south toward the equator, deep, cold water from below upwells and thereby replaces the warmer, less dense surface water displaced to the south by winds of the high-pressure air system.

Hypoxia describes seawater that is low in dissolved oxygen gas (DO). Generally, the accepted concentration value for waters deemed hypoxic is less than (<) 1.5mg O2/L seawater. Marine organisms vary in their oxygen demand. The more active and larger swimming marine organisms such as tuna and mackerel typically require more oxygen per body weight in order to generate the metabolic activity necessary to supply their dense muscles with the requisite energy to slice through the water oftentimes counter to the current. So an active fish that moves into hypoxic waters decreases its chance of survival.

Oregon coast
Oregon coast

Personal Log 

As expected I didn’t sleep well last night, the first night on the ship. It wasn’t because of the ship’s movement either. It hardly moved as the Columbia River was calm with the wind blowing weakly. It’s a given that more often than not I sleep poorly in a new environment whether it’s a hotel, my in-laws home, or camping. Even if dead tired at best I’ll catnap for 1.5 hour intervals at the most, if lucky.

I was assigned to share living-sleeping quarters with three other science team members. The cabin contained two bunk bed units (top and bottom) separated by a wall, two small desks in the corners, ample storage space below each lower bunk bed and all along three of the four walls of the room, a (very) small lavatory with a hot/cold water shower and toilet, and a sink with hot/cold water to freshen up in the morning or before bed. In spite of the room’s relatively small size (~12ft x ~12ft), the storage capacity was more than enough to accommodate the personal gear of four people for simple, Spartan living. Every square inch of wall space was utilized for storage or some other useful, practical function. Basically, no space was wasted. Wall hooks were everywhere to hang jackets. Each bed had its own reading light, a full-length curtain for privacy (relatively speaking), and a side bumper so that when the ship rolled one didn’t roll out of bed onto the floor. Overall, it was a good example of efficient use of space for simple, practical, but productive living.

The mission delay provided more time for me to talk to and get to know members of science team, particularly my assigned shift mate Bob Sleeth, a retired Silicon Valley electronics engineer. After a hearty breakfast we spent Sunday morning exploring the quiet Astoria waterfront. Bob and a friend sailed in a 35 foot yacht from San Diego to French Polynesia in the South Pacific, spending a year sailing to and from the small islands that constitute the vast archipelago of beautiful islands including Bora Bora and Tahiti.

Cargo ship arriving at Astoria port
Cargo ship arriving at Astoria port

After lunch I spent a considerable amount of time studying the wrestling match between the ebb and flow of the high and low tides of the Columbia River. Salt water vs. fresh water. Bob gave me a few pointers on how wave structure gives a clue about the subtle changes in wind direction and speed at the water’s surface. This led to a lengthy conversation about how the nameless but intrepid mariners of ancient times, the Vikings, and those of the Age of Maritime Discovery of the European Renaissance (Ferdinand Magellan, Christopher Columbus, James Cook and many more) used their observational powers to chart the vast oceans without the aid of longitudinal coordinates. For example, the appearance of a certain bird over water, marine organism, or the change in surface water color or texture possibly meant that land or an island, yet unseen over the curvature of the earth’s surface, lay just below the horizon.

Throughout the day a number of cargo ships loaded with goods made their way slowly into port. That led to a discussion about how a seemingly small decrease in water volume translates into cargo ships having to shed weight else they run aground. Early tomorrow morning we start the mission and head out to the intimidating, deep waters of the Pacific Ocean. 

Beth Lancaster, April 13, 2008

NOAA Teacher at Sea
Beth Lancaster
Onboard NOAA Ship McArthur II
April 6 – 14, 2008

Mission: Examine the spatial and temporal relationships between zooplankton, top predators, and oceanographic processes
Geographical area of cruise: Cordell Bank Nat’l Marine Sanctuary & Farallones Escarpment, CA
Date: April 13, 2008

reported surface sea water temperatures for the California coast from satellite data.  The region of sampling is indicated by the box.
Reported surface sea water temps for the CA coast from satellite data. The region of sampling is indicated by the box.

Weather Data from the Bridge 

April 11, 2008 
Wind – Northwest 4-17 knots
Swell Waves – 3-8 Feet
Surface Sea Water Temperature – 9.3-11.9oC

April 12, 2008 
Wind – Light Swell Waves –1 to less than 1 foot
Surface Sea Water Temp – 9.2-12.5oC

Science & Technology Log April 13, 2008 

At the onset of this cruise, ocean winds and swells kept scientists on alert for the next rock of the boat or wave crashing over the side, and into the fantail work area. These winds play an important role in delivering nutrient rich cold waters to the Cordell Bank and the Gulf of Farallones marine areas – this process is referred to as upwelling.  Conditions on Thursday April 11 marked a noticeable change in the weather for this research cruise.  Winds hit a low of 4 knots and swells of three feet were reported from the bridge for the majority of the day.  On April 12 it was hard to believe that we were conducting research out on the ocean.  Conditions were magnificent.  Winds were light and swells were less than one foot.  This change in conditions is termed a period of “relaxation.” 

The term relaxation refers to a period when winds decrease, allowing for conditions that promote a boost in primary productivity.  These conditions include decreased turbulence and the presence of sun and nutrients. The nutrients are readily available from the upwelling and phytoplankton are retained in the well-lit surface waters due to the decrease in wind mixing and the resulting stratification (layering) of the surface waters – thus, providing the optimal conditions for photosynthesis to take place.  Figure one shows surface water temperatures from April 12, 2008.  There was a visible change over the course of the research cruise in surface temperatures with the decrease in winds and swells indicating conditions suitable for primary productivity.

Left to Right: Beth Lancaster, Rachel Fontana (Grad Student, UC Davis), and Caymin Ackerman (Lab Assistant, PRBO) enjoy the sun and calm waters while waiting for a sample to return off the McARTHUR II.
Left to Right: Beth Lancaster, Rachel Fontana (Grad Student, UC Davis), and Caymin Ackerman (Lab Assistant, PRBO) enjoy the sun and calm waters while waiting for a sample to return off the McARTHUR II.

Continuous samples of plankton were taken during the day-time throughout the course of the research cruise. My observations suggest that samples collected early in the trip revealed little macroscopic (visible to the eye) plankton, while samples collected later in the trip during the relaxation event are more diverse and robust. Samples will be examined following the research cruise to draw conclusions based upon quantitative data. Night-time operations included targeted sampling for krill to look at species composition, overall abundance, age and sex.  Krill feed on phytoplankton, and will at times appear green after feeding. The optimal conditions for phytoplankton growth during a period of relaxation will result in a feast for krill that migrate up the water column at night to feed. A large portion of many resident and migratory bird and mammal diets consists of krill, indicating their importance to this marine ecosystem.

Weather conditions over the last few days also provided great visibility for mammal and bird observers. Nevertheless, there were still very few sightings of birds and mammals during this time period.  One sighting of importance was of a short-tailed albatross, an endangered species that is an infrequent visitor to the California Current ecosystem.  The short-tailed albatross population is estimated at 2000, and is currently recovering from feather harvesting in the late nineteenth century and loss of breeding grounds to a natural disaster.  For more information on the short-tailed albatross visit here.

Putting it all together….. 

All of the sampling done over the course of this cruise will allow scientists to look at the dynamics of the food chain during the early springtime.  This is just a small piece of a larger puzzle. The same sampling protocol has been utilized at different times of year in the same research area since the projects beginning in 2004.  This will allow researchers to look at the entire ecosystem, its health, and the interdependence of species to drive management decisions.

Laysan Albatross.
Laysan Albatross.

Personal Log 

As the trip comes to an end I’m grateful to both the scientists and crew members onboard the McARTHUR II. I now have a better understanding of physical oceanography, and the Cordell Bank and Farallones Escarpment ecosystem which I am looking forward to sharing with students for years to come. The McArthur crew has been kind enough to answer every one of my many questions, made me feel welcome, and given me an idea of what life is like at sea. Thank you! This was truly an experience I will remember and look forward to sharing with others.

Animals Seen April 11, 2008 

Cassin’s Auklet (36), Black-legged Kittiwake (1), Western Gull (61), Herring Gull (1), Red-necked Phalarope (8), Sooty Shearwater (12), Northern Fulmar (6), Steller sea-lion (35), California Gull (6), Rhinoceros Auklet (9), Black-footed Albatross (6), and Bonaparte’s Gull (1).

Animals Seen April 12, 2008 

Black-footed Albatross (11), Northern Fulmar (6), Western Gull (48), California Gull (5), Cassin’s Auklet (25), Common Loon (2), Common Murre (58), Bonaparte’s Gull (4), Sooty Shearwater (8), Dall’s Porpoise (6), Red-necked Phalarope (26), Pink-footed Shearwater (3), California Sea Lion (2),  Rhinoceros Auklet (10), Humpback Whale (1), Harbor Seal (1), and Glaucous-winged Gull (2).