Emily Whalen: Trawling in Cape Cod Bay, April 29, 2015

NOAA Teacher at Sea
Emily Whalen
Aboard NOAA Ship Henry B. Bigelow
April 27 – May 10, 2015

Mission: Spring Bottom Trawl Survey, Leg IV
Geographical Area of Cruise: Gulf of Maine

Date: April 29, 2015

Weather Data:
GPS location:  42○51.770’N, 070○43.695’W
Sky condition:  Cloudy
Wind: 10 kts NNW
Wave height: 1-2 feet
Water temperature:  6.2○ C
Air temperature:  8.1○ C

Science and Technology Log:

On board the Henry B. Bigelow we are working to complete the fourth and final leg of the spring bottom trawl survey. Since 1948, NOAA has sent ships along the east coast from Cape Hatteras to the Scotian Shelf to catch, identify, measure and collect the fish and invertebrates from the sea floor. Scientists and fishermen use this data to assess the health of the ocean and make management decisions about fish stocks.

What do you recognize on this chart?  Do you know where Derry, NH is on the map?
This is the area that we will be trawling. Each blue circle represents one of the sites that we will sample. We are covering a LOT of ground! Image courtesy of NOAA.

Today I am going to give you a rundown of the small role that I play in this process. I am on the noon to midnight watch with a crew of six other scientists, which means that we are responsible for processing everything caught in the giant trawl net on board during those hours. During the first three legs of the survey, the Bigelow has sampled over 300 sites. We are working to finish the survey by completing the remaining sites, which are scattered throughout Cape Cod Bay and the Gulf of Maine.  The data collected on this trip will be added to data from similar trips that NOAA has taken each spring for almost 60 years.  These huge sets of data allow scientists to track species that are dwindling, recovering, thriving or shifting habitats.

The CTD ready to deploy.
The CTD ready to deploy.

At each sampling station, the ship first drops a man-sized piece of equipment called a CTD to the sea floor. The CTD measures conductivity, temperature and depth, hence its name.  Using the conductivity measurement, the CTD software also calculates salinity, which is the amount of dissolved salt in the water.  It also has light sensors that are used to measure how much light is penetrating through the water.

While the CTD is in the water,  the deck crew prepares the trawl net and streams it from the back of the ship.  The net is towed by a set of hydraulic winches that are controlled by a sophisticated autotrawl system.  The system senses the tension on each trawl warp and will pay out or reel in cable to ensure that the net is fishing properly.

Once deployed, the net sinks to the bottom and the ship tows it for twenty minutes, which is a little more than one nautical mile. The mouth of the net is rectangular so that it can open up wide and catch the most fish.  The bottom edge of the mouth has something called a rockhopper sweep on it, which is made of a series of heavy disks that roll along the rocky bottom instead of getting hung up or tangled.  The top edge of the net has floats along it to hold it wide open.   There are sensors positioned throughout the net that send data back to the ship about the shape of the net’s mouth, the water temperature on the bottom, the amount of contact with the bottom, the speed of water through the net and the direction that the water is flowing through the net.  It is important that each tow is standardized like this so that the fish populations in the sample areas aren’t misrepresented by the catch.   For example, if the net was twisted or didn’t open properly, the catch might be very small, even in an area that is teaming with fish.

Do you think this is what trawl nets looked like in 1948?
This is what the net looks like when it is coming back on board. The deck hands are guiding the trawl warps onto the big black spools. The whole process is powered by two hydraulic winches.

After twenty minutes, the net is hauled back onto the boat using heavy-duty winches.  The science crew changes into brightly colored foul weather gear and heads to the wet lab, where we wait to see what we’ve caught in the net. The watch chief turns the music up and everyone goes to their station along a conveyor belt the transports the fish from outside on the deck to inside the lab. We sort the catch by species into baskets and buckets, working at a slow, comfortable pace when the catch is small, or at a rapid fire, breakneck speed when the catch is large.

If you guessed 'sponges', then you are correct!
This is the conveyor belt that transports the catch from the deck into the wetlab. The crew works to sort things into buckets. Do you know what these chunky yellow blobs that we caught this time are?

After that, the species and weight of each container is recorded into the Fisheries Scientific Computing System (FSCS), which is an amazing software system that allows our team of seven people to collect an enormous amount of data very quickly. Then we work in teams of two to process each fish at work stations using a barcode scanner, magnetic lengthing board, digital scale, fillet knives, tweezers, two touch screen monitors, a freshwater hose, scannable stickers, envelopes, baggies, jars and finally a conveyor belt that leads to a chute that returns the catch back to the ocean.  To picture what this looks like, imagine a grocery store checkout line crossed with an arcade crossed with a water park crossed with an operating room.  Add in some music playing from an ipod and it’s a pretty raucous scene!

The data that we collect for each fish varies.  At a bare minimum, we will measure the length of the fish, which is electronically transmitted into FSCS.  For some fish, we also record the weight, sex and stage of maturity.  This also often includes taking tissue samples and packaging them up so that they can be studied back at the lab.  Fortunately, for each fish, the FSCS screen automatically prompts us about which measurements need to be taken and samples need to be kept.  For some fish, we cut out and label a small piece of gonad or some scales.  We collect the otoliths, or ear bones from many fish.

It does not look this neat and tidy when we are working!
These are the work stations in the wet lab. The cutters stand on the left processing the fish, and the recorders stand on the right.These bones can be used to determine the age of each fish because they are made of rings of calcium carbonate that accumulate over time.

Most of the samples will got back to the Northeast Fisheries Science Center where they will be processed by NOAA scientists.  Some of them will go to other scientists from universities and other labs who have requested special sampling from the Bigelow.  It’s like we are working on a dozen different research projects all at once!

 

 

 

Something to Think About:

Below are two pictures that I took from the flying bridge as we departed from the Coast Guard Station in Boston. They were taken just moments apart from each other. Why do you think that the area in the first picture has been built up with beautiful skyscrapers while the area in the second picture is filled with shipping containers and industry? Which area do you think is more important to the city? Post your thoughts in the comment section below.

Rows of shipping containers. What do you think is inside them?
Downtown Boston.  Just a mile from the shipping containers.  Why do you think this area is so different from the previous picture?
Downtown Boston. Just a mile from the shipping containers. Why do you think this area is so different from the previous picture?

 

 

 

 

 

 

 

 

 

Personal Log

Believe it or not, I actually feel very relaxed on board the Bigelow!  The food is excellent, my stateroom is comfortable and all I have to do is follow the instructions of the crew and the FSCS.  The internet is fast enough to occasionally check my email, but not fast enough to stream music or obsessively read articles I find on Twitter.  The gentle rocking of the boat is relaxing, and there is a constant supply of coffee and yogurt.  I have already read one whole book (Paper Towns by John Greene) and later tonight I will go to the onboard library and choose another.  That said, I do miss my family and my dog and I’m sure that in a few days I will start to miss my students too!

If the description above doesn’t make you want to consider volunteering on a NOAA cruise, maybe the radical outfits will.  On the left, you can see me trying on my Mustang Suit, which is designed to keep me safe in the unlikely event that the ship sinks.  On the right, you can see me in my stylish yellow foul weather pants.  They look even better when they are covered in sparkling fish scales!

Seriously, they keep me totally dry!
Banana Yellow Pants: SO 2015! Photo taken by fellow volunteer Megan Plourde.
Seriously, do I look awesome, or what?
This is a Mustang Suit. If you owned one of these, where would you most like to wear it? Photo taken by IT Specialist Heidi Marotta.

That’s it for now!  What topics would you like to hear more about?  If you post your questions in the comment section below, I will try to answer them in my next blog post.

Mary Murrian: My First Days in Dutch Harbor, July 6, 2014

NOAA Teacher at Sea 

Mary Murrian

Aboard NOAA Ship Oscar Dyson

July 4 – 22, 2014

Mission: Annual Walleye Pollock Survey

Geographical Area of Cruise: Bering Sea North of Dutch Harbor

Date: Sunday, July 6th, 2014

Weather Data from the Bridge:

Wind Speed: 6 kts

Air Temperature: 8.6 degrees Celsius

Weather conditions: Hazy

Barometric Pressure: 1009.9

Latitude: 5923.6198  N

Longitude: 17030.6395  W

 

Science and Technology Log

Part One of the Survey Trawl: Getting Ready to Fish

This is a picture of a pollock from our first trawl.
This is a picture of a pollock from our first trawl.

Today is my second day aboard the Oscar Dyson.  We are anxiously waiting for the echosounder (more information on echosounder follows) to send us a visual indication that a large abundance of fish is ready to be caught.  The point of the survey is to measure the abundance of Walleye Pollock throughout specific regions in the Bering Sea and manage the fisheries that harvest these fish for commercial use to process and sell across the world.  The Walleye Pollock are one of the largest populations of fish.  It is important to manage their populations due to over-fishing could cause a substantial decrease the species.  This would be detrimental to our ecosystem.  The food web [interconnecting food chains; i.e. Sun, plants or producers (algae), primary consumers, animals that eat plants (zooplankton), secondary consumers, animals that eat other animals (pollock), and decomposers, plants or animals that break down dead matter (bacteria)] could be altered and would cause a negative effect on other producers and consumers that depend on the pollock for food or maintain their population.

The main food source for young pollock is copepods, a very small marine animal (it looks like a grain of rice with handle bars).  They also eat zooplankton (animals in the plankton), crustaceans, and other bottom dwelling sea life.  On the weird side of the species, adult pollock are known to eat smaller pollock.  That’s right, they eat each other, otherwise known as cannibalism.  Pollock is one of the main food sources for young fur seal pups and other marine life in Alaskan waters.  Without the pollock, the food web would be greatly altered and not in a positive way.

How do we track the pollock?

Pollock
Pollock

Tracking begins in the acoustics lab.  Acoustics is the branch of science concerned with the properties of sound.  The acoustics lab on board the Oscar Dyson, is the main work room where scientists can monitor life in the ocean using an echosounder which measures how many fish there are with sound to track the walleye pollock’s location in the ocean.  They also use the ships’s GPS (Global Positioning System), a navigation system, to track the location of the NOAA vessel and trawl path.

Echo Sounder
Sonar Screen

What is sonar and how does it work? 

Sonar (sound ranging & navigation;  it’s a product of World War II) allows scientists to “see” things in the ocean using sound by measuring the amount of sound bouncing off of objects in the water.  On this survey, sonar images are displayed as colors on several computer monitors, which are used to see when fish are present and their abundance.  Strong echoes show up as red, and weak echoes are shown as white.  The greater the amount of sound reported by the sonar as red signals, the greater the amount of fish.

Echo Sonar Screen Showing the patterns of echos from the ocean.
Echo Sonar Screen Showing the patterns of echos from the ocean.

How does it work?  There is a piece of equipment attached to the bottom of the ship called the echosounder.  It sends pings (sound pulses) to the bottom of the ocean and measures how much sound bounces back to track possible fish locations.   The echo from the ocean floor shows up as a very strong red signal.   When echoes appear before the sound hits the ocean floor, this represents the ping colliding with an object in the water such as a fish.

The scientists monitor the echosounder signal so they can convey to the ships’s bridge and commanding officer to release the nets so that they can identify the animals reflecting the sound.  The net catches anything in its path such as jellyfish, star fish, crabs, snails, clams, and a variety of other fish species. Years of experience allows the NOAA scientists the ability to distinguish between the colors represented on the computer monitor and determine which markings represent pollock versus krill or other sea life.  We also measure the echoes at different frequencies and can tell whether we have located fish such as pollock, or smaller aquatic life (zooplankton). The red color shown on the sonar screen is also an indicator of pollock, which form dense schools.  The greater amount of red color shown on the sonar monitor, the better opportunity to we have to catch a larger sample of pollock.

The Science Team Wonderful group of people.

Once we have located the pollock and the net is ready, it is time to fish.  It is not as easy as you think, although the deck hands and surveyors make it look simple.  In order to survey the pollock, we have to trawl the ocean.  Depending on the sonar location of the pollock, the trawl can gather fish from the bottom of floor, middle level and/or surface of the ocean covering preplanned locations or coordinates. Note: Not all the fish caught are pollock.

The preplanned survey path is called transect lines with head due north for a certain distance. When the path turns at a 90 degree angle west (called cross-transect lines) and turns around another 90 degree angle heading back south again.  This is repeated numerous times over the course of each leg in order to cover a greater area of the ocean floor.  In my case we are navigating the Bering Sea.  My voyage, on the Oscar Dyson is actually the second leg of the survey, in which, scientists are trawling for walleye pollock.  There are a total of three legs planned covering a distance of approximately 6,200nmi (nautical miles, that is).

Trawling is where we release a large net into the sea located on the stern (the back of the boat).  Trawling is similar to herding sheep.  The fish swim into the net as the boat continues to move forward, eventually moving to the smaller end of the net.  Once the sonar screen (located on a computer monitor) shows that we have collected a large enough sample of pollock, the deck hands reel the net back on board the boat.

 

The crew are beginning to release the trawl net.
The crew are beginning to release the trawl net.
This is the stern of the boat where the trawl net gets released into the ocean.
This is the stern of the boat where the trawl net gets released into the ocean.

We have caught the fish, now what?  Stay tuned for my exciting experience in the wet lab handling the pollock and other marine wild life.  It is most certainly an opportunity of a lifetime.

Personal Log

What an adventure!

I was lucky enough to spend a day exploring Dutch Harbor, Alaska before departing on the pollock survey across the Bering Sea. It took me three plane rides, several short lay-overs and and a car ride to get here, a total of 16 hours. There is a four hour time difference between Dutch Harbor and Dover, Delaware. It takes some getting used to, but definitely worth it. The sun sets shortly after 12:00 midnight and appears again around 5:00 in the morning. Going to sleep when it’s still daylight can be tricky. Thank goodness I have a curtain surrounding my bed. Speaking of the bed, it is extremely comfortable. It is one of those soft pillow top beds. Getting in and out of the top bunk can be challenging. I haven’t fallen yet.

My bed is the top bunk.
My bed is the top bunk.

During my tour through the small town of Dutch Harbor, I have encountered very friendly residents and fishermen from around the world.  I was fortunate to see the U.S. Coast Guard ship Healy docked at the harbor. What a beautiful vessel.  Dutch Harbor has one full grocery store (Safeway) just like we have in Delaware, with the exception of some of the local Alaska food products like Alaska BBQ potato chips. They have a merchant store that sells a variety of items ranging from food, souvenirs, clothing, and hardware. They have three local restaurants and a mom and pop fast food establishment. One of the restaurants is located in the only local Inn the Aleutian hotel, which also includes a gift shop. Dutch Harbor is home to several major fisheries. Dutch Harbor is rich in history and is home to the native Aleutian tribe. I took a tour of their local museum. It was filled with the history and journey of the Aleutian people. While driving through town, I got a chance to see their elementary and high school. They both looked relatively new. Dutch Harbor is also home to our nation’s first Russian Orthodox Church. Alaska is our 50th state and was purchased from Russia in 1867.

Me and the Oscar Dyson
Mary Murian in front of the Oscar Dyson
A very funny photo of me in my survival suit.
A very funny photo of me in my survival suit.

One of the coolest parts of my tour was walking around the area known as the “spit”. The “spit” is located directly behind the airport. I’m told it is called the “spit” because the land and water are spitting distance in length and width. We walked along the shoreline and discovered hundreds of small snails gathered around the rocks. We also found hermit crabs, starfish, sea anemones, jellyfish, and red algae. We saw red colored water, which is a bloom or a population explosion of tiny algae that get so thick that they change the color of the water.

One of numerous amazing views in Dutch Harbor
One of numerous amazing views in Dutch Harbor
tas 2014 day 1 and perboarding july 2-4th 089
Starfish

Another animal in abundance in Dutch Harbor is the bald eagle. There is practically one on every light post or tall structure. Often the bald eagles are perched in small groups. Watch out: if you walk too close to a nesting mother, she will come after you. They are massive, regal animals. I never get tired of watching them.

We had to watch our step, the snails were everywhere along the shoreline of the Spit.
We had to watch our step, the snails were everywhere along the shoreline of the Spit.
A bald eagle hoping to find some lunch.
A bald eagle hoping to find some lunch.
Russian Orthodox Church in Dutch Harbor, AK
Russian Orthodox Church in Dutch Harbor, AK

Did You Know?

Did you know that Alaska’s United States Coast Guard vessel has the ability to break through sea ice? 

This is especially helpful if you want to study northern areas, which are often ice covered, in the winter, and to assist a smaller boat if it gets trapped in the ice.

U.S. Coast Guard Ship Healy docked at the Spit.
U.S. Coast Guard Ship Healy docked at the Spit.

Did you know that scientists set time to Greenwich Mean Time (GMT) which is the time in a place in England?

This reduces confusion (e.g. related to daylight savings, time zones) when the measurements are analyzed.

Key Vocabulary:

Carnivore

Primary Consumer

Secondary Consumer

Nautical Miles

Trawling

Stern

Acoustics

Decomposers

Echosounder

Meet the Scientist:

Alex De Biologist
Alex De Robertis Chief Scientist

Leg II Chief Scientist Dr. Alex De Robertis

Title: NOAA Research Fishery Biologist (10 years)

Education:  UCLA Biology Undergraduate Degree

Scripps Institute Oceanography San Diego, CA PhD.

Newport, Oregon Post Doctorate work

Living Quarters:

Born in Argentina and moved to England when one-year old.

Lived in Switzerland and moved to Los Angeles,CA at the age of 13.

Currently lives in Seattle, Washington, and he has two kids aged one and five.

Job Responsibilities:

Responsible for acoustic trawl surveying at Alaska Fisheries Science Center

Was able to help with the Gulf of Mexico oil spill clean-up using the same echo sonar used on trawl surveys.

What is cool about his work:

He enjoys his work, especially the chance to travel to different geographic locations and meet new people.  “You never know what you are going to encounter; there is always a surprise or curve ball, when that occurs you adjust and just go with it”.

In the near future, he would love to see or be part of the design for an autonomous ocean robot that will simplify the surveying process.

He has been interested in oceans and biology since a small boy.  He remembers seeing two divers emerge from the sea and was amazed it was possible.

Kainoa Higgins: Preparing to Set Sail! June 15, 2014

NOAA Teacher at Sea

Kainoa Higgins

(Almost) Aboard the R/V Ocean Starr

June 18 – July 3, 2014

Mission: Juvenile Rockfish Survey

Geographical Area of Cruise: Pacific Coast

Date: June 15, 2014

Personal Log

Aloha from the great Pacific Northwest!  My name is Kainoa Higgins and although I was born and raised on the island of O’ahu, Hawai’i, I have spent the last 10 years calling Tacoma, Washington home.  I am incredibly excited to have been selected as a 2014 NOAA Teacher at Sea and can’t wait to climb aboard the R/V Ocean Starr in a matter of hours!  I will be participating in two legs of research during my two and half weeks on ship.

During the first leg, I will be assisting scientists with conducting a Juvenile Rockfish Survey as they examine groundfish populations off the coast of the Western Seaboard of the North America.  Though I have been attempting to get caught up to speed, I currently only understand the program at a general level.  There are many species of rockfish, all of which are commercially valuable, and keeping track of their populations and distributions is essential for conscious management.  Having spoken with my Chief Scientist for this leg, Ric Brodeur, on several occasions leading up to my departure, I understand that my job will entail any, some or all of the following: mammal/bird observational surveys and plankton analysis by day followed by sorting of trawled collections analysis of the catch in the wet lab by night.  I’ll be able to share more as the adventure unfolds.

In the second leg, I will connect with Laurie Weitkamp who will take over as chief scientist with a fresh research team and research focus.  In a recent e-mail Laurie explained that this leg will be “experimental”.  In short, we will be trying a variety of modifications to a marine mammal excluder device to see how it fishes and influences the catch.  I’m not sure, exactly, how the MMED is used, but I would be willing to take a guess at it’s purpose.  I imagine it has something to do with an attempt to maintain commercial fishing operations without the interruption of marine mammals (dolphins, porpoises, seals, whales, etc.) in close proximity.  Through some sort of “deflection”, its goal would also be reduce unintentional by-catch.  Once again, I’ll know more concretely a bit further down the road.  According to Laurie, in addition to help work up the catch, I will be helping with “marine mammal watch” before and during fishing.  Since we will use a surface trawl during the day, it is possible that we could catch a marine mammal (e.g., seals and dolphins). To minimize this risk, I will help serve as a lookout  before we set and when the trawl is out, and are required to immediately stop fishing if any are spotted nearby.  I look forward to spending some time on the bow scanning the horizon for marine mammals.

Plankton
One of my favorite pics of marine diatoms (phytoplankton) from the Puget Sound. Taken with iphone camera though microscope eyepiece.

A bit more about myself and the school I represent.  I grew up loving the ocean.  Much of my life as a child was spend in or around it.  Whether snorkeling, surfing or fishing my brother and I were raised to respect and appreciate all that the ocean had to offer.  After all, my name, Kainoa, means “free as the sea”.  There is a saying in the islands, Malama ‘aina, Malama i ke kai, meaning ‘to care for the land and care for the ocean’.  After graduating from Punahou School  in Honolulu, Hawaii I headed for the great Northwest to attend the University of Puget Sound.  I participated in Athletics, Lu’au, Senior Theatre Festival and even Greek Life.  I studied Biology and spent a semester abroad in Christchurch, New Zealand.  Even though I took Marine Biology in one of the most amazing diverse systems in the world, my favorite class had to be “The Diversity of Algae”.  It opened my eyes up to the beauty and importance of micro life for the first time.  This led to my passion for – and borderline obsession with – plankton.

After earning a Master’s in the Arts of Teaching from UPS, I began my career at the Tacoma School of the Arts teaching entry level biology.  After my second year, I was asked to join our recently founded sister school, the Tacoma Science and Math Institute (SAMI) located in Point Defiance Park on the North Tacoma peninsula.  SAMI  is built around a particular vision: we believe that students make the most of their learning when they take ownership of their education—when students intentionally choose to take on the challenge real learning entails. We further believe that this ownership most naturally develops within a learning community, encouraged by others who share that commitment.  We theme our curriculum around the math and science and emphasis the integration of disciplines and staff collaboration all the while perpetuating the pillars on which the schools were founded: community, empathy, thinking and balance.  SAMI has allowed me to pursue my passion for marine science.  We are a two minute walk to the waterfront which makes the learning opportunities for myself as students invaluable.  Between this field resource and collaborations with the University of Washington in the High School program and the University’s School of Oceanography I am in a position to offer my students a world-class learning experience.

I think it is important that teachers are always looking for opportunities to improve their practice and better educate themselves in ways that will better prepare their students for the world ahead of them.  The Teacher at Sea opportunity is an incredible way to engage myself as a life-long learner and will help me to better engage and inspire my students.  I look forward to designing and offering lessons derived from real-time science and experiences.  I am very grateful for this opportunity and can’t wait to share it with you.

See you soon,

Kainoa

 

SAMI Students
SAMI Students reflecting on a trip to Dungeness Spit, WA.
Pups
The men of the house in my absence
Sandys
A relationship founded on respect

 

Amie Ell: Fireworks, Fish, and Flukes, July 6, 2013

NOAA Teacher at Sea
Amie Ell
Aboard NOAA Ship Oscar Dyson (NOAA Ship Tracker)
June 30 – July 21, 2013

Mission: Alaska Walleye Pollock Survey
Geographical Area: Gulf of Alaska
Date: July 6th, 2013

Location Data from the Bridge:
Latitude: 55.29.300 N
Longitude: 156.25.200 W
Ship speed:   10.7 kn

Weather Data from the Bridge:
Air temperature: 8.6 degrees Centigrade
Surface water temperature: 8.6 degrees Centigrade
Wind speed:  14 kn
Wind direction: 210 degrees
Barometric pressure: 1008.5 mb

Science and Technology Log:

The Oscar Dyson is equipped with several labs to accommodate the researchers on board.  In this blog post I will describe to you what is happening in the wet/fish lab.  This is where I have experienced quite a bit of hands-on data collection.

Pollock being separated on the conveyor belt.
Pollock being separated on the conveyor belt.
Basket full of pollock.
Basket full of pollock.

After a trawl, the crew dumps the load of  fish into a bin.  Inside the lab we can raise or lower this bin to control the amount of fish coming onto a conveyor belt.  Once the fish are on the belt the scientists decide how they will be separated.   We separate the pollock according to age into baskets.  They are categorized by size; under 20 cm (age 1), under 30 cm (age 2), and any larger than 30 cm

OLYMPUS DIGITAL CAMERA
A lumpsucker
A basket full of small squid
A basket full of small squid

At this time we also pull out any other sea creatures that are not pollock.  So far we have pulled up quite a few jelly fish, la lumpsucker, shrimp, squid, eulachon, and capelin.  These are also weighed, measured, and in some cases frozen per request of scientists not currently on board.

Larger squid.
Larger squid.

After organizing the pollock into appropriate age groups, we then measure and record their weight in bulk.  Scientists are using a scale attached to a touch screen computer with a program called CLAMS to record this information.  The pollock are then dumped into a stainless steel bin where their sex will be determined.  In order to do this the fish must be cut open to look for “boy parts, or girl parts”.   After the pollock are separated into female and male bins we begin to measure their length.

This is the tool used for measuring length of the fish.
This is the tool used for measuring length of the fish.

The tool used to measure length is called the Ichthystick.  This tool is connected to the CLAMS computer system.  The fish is placed on the Ichthystick and a pointer with a magnet in it is placed at the tail end of the fish.  There are three different types of length measurement that can be done: fork length, standard length, and total length.  When the magnetic pointer touches the Ichthystick it senses that length and sends the information to the CLAMS computer system.

OLYMPUS DIGITAL CAMERA
Northern shrimp

One of these bins of fish is placed aside for individual weighing, length measurements, and removal of otoliths.  You may recall that I mentioned otoliths in the last blog post.  These ear bones are sent to a lab and analyzed to determine the age of each of these individually measured fish.  The Alaska Fisheries Science Center has created a demonstration program where you can try to determine the age of different types of fish by looking at their otoliths. Click here to try it yourself! (I will add hyperlink to: http://www.afsc.noaa.gov/refm/age/interactive.htm)

Personal Log:

Ben and Brian in fire gear  with flares.
Ben and Brian in fire gear with flares.

One afternoon while waiting for the fishermen to bring up the trawl net, I watched a group of porpoises swimming behind the ship.  Another day I was able to see whales from up on the bridge.  These were pretty far out and required binoculars to see any detail.  I observed many spouts, saw one breach, and some flukes as well.

There is quite a bit of downtime for me on the ship while I am waiting in between trawls.  I get to read a lot and watch movies in my free time.  I have had the opportunity to talk with different members of the crew and learn about their roles a bit.  The chief engineer gave me a tour of the engine rooms (more about this with pictures in a future post.)

The 4th of July fireworks show on the Oscar Dyson was like no others I have ever experienced.  Two of our crew, Ben & Brian, dressed in official fire gear shot expired flares off the ship into the sea.  America themed music was played over the PA system.  I have attached a video of our fireworks display.  Happy Independence Day everyone!

Stacey Jambura: Not Your Average Fish Tail Tale July 16, 2012

Stacey Jambura
July 6 – 17, 2012
.
Geographical Area of Cruise: Gulf of Mexico
(You can view the NOAA ShipTracker here: http://shiptracker.noaa.gov/shiptracker.html)
Date: July 16, 2012
.
Weather Details from Bridge: (at 15:45 GMT)
Air Temperature: 28.8 ◦C
Water Temperature: 28.80 ◦C
Relative Humidity: 70 %
Wind Speed: 8.56 kts
Barometric Pressure: 1,017.68 mb

.

Science and Technology Log

The Trawling Net

Trawling Net
Trawling Net

The trawling net is used to collect groundfish samples. It is deployed from the stern of the ship and towed for 30 minutes. The net is towed back in and brought onboard to be emptied. During this process it is important that everyone at the stern of the ship is wearing a hard hat and a personal flotation device in the unlikely event that something goes wrong. Once the net is lifted over the side of the ship and brought on deck, it is untied and emptied into large baskets.

Hauling the trawling net back onboard.
Hauling the trawling net back onboard.

The baskets are weighed before they are brought inside and emptied onto a large conveyor belt. The fish are spread out on the belt so they are easier to sort. The fish are sorted into individual baskets by species. Once all of the fish are sorted, we count them and find their total weight. We then work through each basket and measure, weigh, and identify the sex of each specimen. Once we are done measuring the fish, some are bagged, labeled and frozen for scientists to examine back at their labs. The rest of the fish are thrown back into the ocean.

Emptying the trawling net into baskets
Alex & Reggie emptying the net into baskets.

We found many different species of vertebrates and invertebrates (fish with a spine, and those without a spine). Here are some of the fish we found:

Vertebrates

Invertebrates

It is important to document the length and weight of each fish collected in a trawl. We used special measuring boards and scales to collect this data. There are two boards, each is connected to one computer. When we measure the fish, we use a magnetic wand. When it touches the board, it sends a signal to the computer which records the length of the fish. Fish are measure at one of three lengths: fork length, standard length, and total length. Once the fish are measured, they are placed on a scale to be weighed. The scale is also connected to the computer and records the weight of the fish.

Scale
Scale
Boards
Measuring Boards
Fork length is measured from the inside of the tail of the fish.
Fork length is measured from the inside of the tail of the fish.
Standard length is measure from the base of the tail of the fish.
Standard length is measure from the base of the tail of the fish.
Total length is measured from the tip of tail of the fish.
Total length is measured from the tip of tail of the fish.

Personal Log

Day 12 – July 16th

Today is my last day at sea before we dock in Pascagoula,Mississippi. It has been quite a journey and I can’t believe it is already over. Though the work was hard and hot (and many times smelly), it was an amazing experience and I hope to one day have the opportunity to experience it again! I have met many wonderful people and hope to keep in touch with them! I have learned so much about our oceans and the life within them. I hope that my blogs have given you a glimpse into what life onboard the Oregon II is like and I hope that you have learned something about the work that takes place on the open seas.

Map of our Survey
Map of our Survey

Although this is my last day on the Oregon II, keep an eye out for one final blog. There will be interviews with the crew of the Oregon II, what their job is, why they chose this line of work, the steps they took to become a crew member of the Oregon II, and words of advice for students everywhere!