NOAA Teacher at Sea
Valerie Bogan
Aboard NOAA ship Oregon II
June 7 – 20, 2012
Mission: Southeast Fisheries Science Center Summer Groundfish (SEAMAP) Survey
Geographical area of cruise: Gulf of Mexico
Date: Tuesday June 12, 2012
Weather Data from the Bridge: Sea temperature 28 degrees celsius, Air temperature 26.4 degrees celsius, building seas.
Science and Technology Log
Today I want to discuss the neuston net. This is a very large net made out of finely woven mesh which is deployed (shoved off the side of the boat) in order to catch plankton. There are three types of plankton: phytoplankton (plants and algae), zooplankton (animals), and ichytoplankton (baby fish). The neuston net rides along the surface of the water for ten minutes scooping up any organisms which are near the surface. After the ten minutes are up, the deck crew uses a crane to pull the net out of the water and bring it up to the point where someone can wash it down with a hose. This is necessary because not all of the plankton ends up in the cod end (the place where the collection jar is located) so we have to use a hose to get all of the loose stuff washed into the end of the net. After the net is washed down, the cod end is carefully removed, placed in a bucket and taken to the stern (back) of the ship where it is processed.
This is how the neuston net is moved from the ship into the water. From left to right Jeff, Marshall, and Chris are safely deploying the net.
To process the sample you must first empty the contents of the cod end into a filter which will allow the water to run out but will keep the sample. Then you transfer (move) the sample from the filter into a glass sample jar. Sometimes the sample smoothly slides into the jar and other times you have to wash down the filter with some ethanol. Once all of the sample is in the jar it is topped off with ethanol, a tag is placed inside the jar, and another tag is put on top of the jar. This sample is stored on the boat and taken back to the NOAA lab where it will be cataloged.
In this picture I am filtering out the water from the neuston sample so it can be placed in a sample jar.(Picture by Francis)
Personal Log
Today is our fifth day at sea and I’m feeling fairly comfortable with my duties on the ship. I was assigned to the night watch which runs from midnight till noon the next day. I’ll admit I didn’t make it the entire time the first day. We got done early and despite my intentions to stay up until my shift, I would have ended I falling asleep. The second night was better. I was beyond exhausted at the end, but I did manage to make it through the entire shift. At this point my mind and body have adjusted to the shift and I can easily drift to sleep at 3 pm and get up at 11:15 pm. Students, this is a great example of what it means to be responsible. If I was given the choice, do you think I would have chosen these crazy hours or to work twelve hours straight? No of course not but I really wanted to come on this expedition and this work assignment is part of the trip. So I’m doing the same thing I would expect you to do in a situation like this: accept it and get the work done.
Now I don’t want you to think that the trip is just about hard work. It’s also about seeing new places and getting to know some interesting people. I started out this trip in Pascagoula Mississippi, a city and state I never planned on visiting before this assignment. However, the people there were so helpful and friendly that I would gladly go back to see more of this region. All of you from the Kokomo area know that the major employers are automobile companies. Well, Pascagoula also has a major industry: ship building. So despite the distance between Kokomo and Pascagoula–about 900 miles–each town depends on an industry for their survival and both towns are incredibly proud of their contribution to society.
The major industry in Pascagoula is ship building.
I have been introducing you to parts of the ship, and today I’m going to tell you about the bridge. Now this is not the type of bridge that crosses a river, but rather the command center of the ship. The crew on the bridge is responsible for the safety of all personal on board and for the ship itself. There is a vast array of technology on the bridge which the crew uses to plot our course, check the weather, and to do hundreds of other things which are necessary for the ship to function.
This is the chart the bridge crew uses to plot our course.
NOAA Teacher at Sea Carmen Andrews Aboard R/V Savannah July 6 – 18, 2012
Carmen Andrews
Hello!
Happy Summer Solstice Day! I am Carmen Andrews. I work as a science specialist at Six to Six Interdistrict Magnet School in Bridgeport, CT. I have just finished my 5th year at this school. I create science curriculum for grades pre-K through 8. I also teach many classes to help teachers improve their understanding of science concepts and inquiry methods.
Six to Six Interdistrict Magnet School, Bridgeport, CT
Our school has a unique academic program that incorporates partnerships with the Maritime Aquarium in Norwalk, CT and the Eli Whitney Museum in Hamden, CT. Our students visit many other places, including the Yale Peabody Museum and Yale Leitner Family Planetarium and Observatory in New Haven. We also allow our students to remotely operate the Gold Apple Valley Radio Telescope in California. My favorite places to teach classes are the unspoiled outdoor sites in Connecticut where we take our students for field studies.
4th Graders on a Marsh Field StudyKindergarteners Investigating Marine Invertebrates6th Graders Counting Intertidal Organisms Using a Quadrat
I love research!
One of my passions as an educator is creating opportunities for students to investigate real world problems using science inquiry. This year my 6th and 7th graders took on a big environmental research project. They were asked to research bioremediation and to develop a creative solution to a major problem in their community — toxic oil spills. The work was funded by a NSTA/Toyota Tapestry Grant award, which enabled us to find out about blue and gray oyster mushrooms’ ability to metabolize oil spills in soil. Our project is called Going Green in Brownfields: A New Diet for Mushrooms. You can see our blog here: mushroomdiet.info
A 7th Grader Massing Blue Oyster Mushrooms Grown in Motor Oil
My Teacher at Sea Adventure
TheNOAA Teacher at Sea program was created to provide teachers with experiences in science research. We share our knowledge with our school communities using blogs, teaching and writing articles when we return from our Teacher at Sea assignment. I am very excited to learn about the work of NOAA in monitoring fisheries in U.S. coastal waters. I am eager to share this scientific research with students. I also want to expose students to the variety of maritime and marine science careers that they can consider pursuing in later life.
I will be departing on the R/V Savannah in about 2 weeks to participate in a reef fish survey. The next time I write, I will most likely be somewhere near Skidaway Island, GA. My target audience for my blogs while I am at sea, are students, colleagues and friends of all ages. Please feel free to post your comments and questions about this important science research.
NOAA Teacher at Sea Lesley Urasky Aboard the NOAA ship Pisces June 16 – June 29, 2012
Mission: SEAMAP Caribbean Reef Fish Survey Geographical area of cruise: St. Croix, U.S. Virgin Islands Date: June 18, 2012
Location: Latitude: 17.6568
Longitude: -64.9281
Weather Data from the Bridge:
Air Temperature: 28.5°C (83.3°F)
Wind Speed: 17.1 knots (19.7 mph), Beaufort scale: 5
Wind Direction: from SE
Relative Humidity: 75%
Barometric Pressure: 1,014.80 mb
Surface Water Temperature:28.97 °C (84.1°F)
Science and Technology Log
Alright, so I’ve promised to talk about the fish. Throughout the science portions of the cruise, the scientists have not been catching the anticipated quantities of fish. There are several lines of thought as to why: maybe the region has experienced overfishing; possibly the sampling sites are too shallow and deeper water fish may be more likely to bite; or they might not like the bait (North Atlantic mackerel) since it is not an endemic species/prey they would normally eat.
So far, the night shift has caught more fish than the day shift that I’m on. Today, we have caught five and a half fish. The half fish was exactly that – we retrieved only the head and it looked like the rest of the body had been consumed by a barracuda! These fish were in the grouper family and the snapper family.
Coney (Cephalopholis fulvus)Blackfin snapper (Lutjanus buccanella). This little guy was wily enough to sneak into the camera array and steal some squid out of the bait bag! The contents of his stomach – cut up squid – can be seen to the left between the forceps and his head.
Once the fish have been caught, there are several measurements that must be made. To begin, the fish is weighed to the nearest thousandth (three decimal places) of a kilogram. In order to make sure the weight of the fish is accurate, the scale must be periodically calibrated.
Then there are several length measurements that are made: standard length (SL), total length (TL) and depending on the type of fish, fork length (FL). To make these measurements, the fish is laid so that it facing toward the left and placed on a fish board. The board is simply a long plank with a tape measure running down the center. It insures that the fish is laid out flat and allows for consistent measurement.
Standard length does not measure the caudal fin, or tail. It is measured from the tip of the fish’s head and stops at the end of the last vertebra; in other words, if the fish is laying on its side, and you were to lift the tail up slightly, a crease will form at the base of the backbone. This is where the standard length measurement would end. Total length is just as it sounds – it is a measurement of the entire length (straight line) of the fish. Fork length is only measured if the type of fish caught has a forked tail. If it does, the measurement begins at the fish’s snout and ends at the v-notch in the tail.
How to measure the three types of lengths: standard, fork, and total. (Source: Australian Government: Department of Sustainability, Environment, Water, Population, and Communities)Red hind (Epinephelus guttatus) on the fish board being measured for standard length. Ariane’s thumb is on the crease marking the end of its backbone.
Once the physical measurements are made, the otoliths must be extracted and the fish sexed. You’re probably anxious to learn if you selected the right answer on the previous post’s poll – “What do you think an otolith is?” An otolith can be thought of as a fish’s “ear bone”. It is actually a structure composed of calcium carbonate and located within the inner ear. All vertebrates (organisms with backbones) have similar structures. They function as gravity, balance, movement, and directional indicators. Their presence helps a fish sense changes in horizontal motion and acceleration.
In order to extract the otoliths, the fish must be killed. Once the fish has been killed, the brain case is exposed and peeled back. The otoliths are in little slits located in the underside of the brain. It takes a delicate touch to remove them with a pair of forceps (tweezers) because they can easily break or slip beyond the “point of no return” (drop into the brain cavity where they cannot be extracted).
Otoliths are important scientifically because they can tell many important things about a fish’s life. Their age and growth throughout the first year of life can be determined. Otoliths record this information just like tree ring record summer/winter cycles. More complex measurements can be used to determine the date of hatch, once there are a collected series of measurements, spawning times can be calculated.
A cross-section of an otolith under a microscope. The rings are used to determine age and other life events. Source: Otolith Research Laboratory, Bedford Institute of Oceanography, Dartmouth, Nova Scotia, Canada.
Because they are composed of calcium carbonate (CaCO3), the oxygen component of the chemical compound can be used to measure stable oxygen isotopes; this is useful for reconstructing temperatures of the waters the fish has lived in. Scientists are also able to look at other trace elements and isotopes to determine various environmental factors.
Extracted otoliths. Often they are around 1 cm long, although the larger the fish, the slightly larger the otolith.
The final step we take in measurement/data collection is determining the sex and maturity of the fish. To do this, the fish is slit open just as if you were going to clean the fish to filet and eat it. The air bladder must be deflated if it isn’t already and the intestines moved out of the way. Then we begin to search for the gonads (ovaries and testes). Once the gonads are found, we know if it is female or male and the next step is to determine its stage or maturity. This is quite a process, especially since groupers can be hermaphroditic. The maturity can be classified with a series of codes:
U = undetermined
1 = immature virgin (gonads are barely visible)
2 = resting (empty gonads – in between reproductive events)
3 = enlarging/developing (eggs/sperm are beginning to be produced)
4 = running ripe (gonads are full of eggs/sperm and are ready to spawn)
5 = spent (spawning has already occurred)
Ovaries of a coney (grouper family). These are the pair of flesh colored tubular structures running down the center of the fish.
Personal Log
Today is my birthday, and I can’t think of a better place to spend it! What a treat to be having such an adventure in the Caribbean! This morning, we were on our first bandit reel survey of the day, and the captain came on over the radio system, announced my birthday and sang Happy Birthday to me. Unbeknownst to me, my husband, Dave, had emailed the CO of the Pisces asking him to wish me a happy birthday.
We’ve had a very successful day (compared to the past two days) and have caught many more fish – 5 1/2 to be exact. The most exciting part was that I caught two fish on my bandit reel! They were a red hind and blackfin snapper (see the photos above). What a great birthday present!
Father’s Day surf and turf dinnerMy birthday fish! The blackfin snapper is on the left and the red hind on the right.I even got a birthday kiss from the red hind!
Last night (6/17) for Father’s Day, we had an amazing dinner: filet mignon, lobster, asparagus, sweet plantains, and sweet potato pie for dessert! Since it was my birthday the following day (6/18), and one of the scientists doesn’t like lobster, I had two tails! What a treat!
Our best catch of the day came on the last bandit reel cast. Joey Salisbury (one of the scientists) caught 5 fish: 4 blackfin snapper and 1 almaco jack; while Ariane Frappier (another scientist) caught 3 – 2 blackfin and 1 almaco jack. This happened right before dinner, so we developed a pretty good assembly line system to work them up in time to eat.
Dinner was a nice Chinese meal, but between the ship beginning to travel to the South coast of St. Thomas and working on the computer, I began to feel a touch seasick (not the best feeling after a large meal!). I took a couple of meclazine (motion sickness medication) and still felt unwell (most likely because you’re supposed to take it before the motion begins). My roommate, Kelly Schill, the Operations Officer, made me go to bed (I’m in the top bunk – yikes!), gave me a plastic bag (just in case!), and some saltine crackers. After 10 hours of sleep, I felt much, much better!
I had some time in between running bandit reels, baiting the hooks, and entering data into the computers,to interview a member of the science team that joined us at the last-minute from St. Croix. Roy Pemberton, Jr. is the Director of Fish and Wildlife for the Department of Planning and Natural Resources of the U.S. Virgin Islands. The following is a snippet of our conversation:
LU: What are your job duties as the Director of Fish and Wildlife?
RP: I manage fisheries/wildlife resources and try to educate the population on how to better manage these resources to preserve them for future generations of the U.S. Virgin Islands.
LU: When did you first become interested in oceanography?
RP: I’m not really an oceanographer, but more of a marine scientist and wildlife biologist. I got interested in this around 5-6 years old when I learned to swim and then snorkel for the first time. I really enjoyed observing the marine environment and my interest prompted me to want to see and learn more about it.
LU: It’s such a broad field, how did you narrow your focus down to what you’re currently doing?
RP: I took a marine science class in high school and I enjoyed it tremendously. It made me seek it out as a career by pursuing a degree in Marine Science at Hampton University.
LU: If you were to go into another area of ocean research, what would it be?
RP: Oceanography – Marine Spatial Planning
Roy Pemberton holding a recently caught coney.
LU: What is the biggest challenge in your job?
RP: It is a challenge to manage fisheries and wildlife resources with respect to the socioeconomic and cultural nuances of the people.
LU: What do you think is the biggest issue of contention in your field, and how do you imagine it will resolve?
RP: Fisheries and coral reef management. We need to have enough time to see if the federal management efforts work to ensure healthier ecosystems for future generations.
LU: What are some effects of climate change that you’ve witnessed in the reef systems of the U.S. Virgin Islands?
RP: Temperatures have become warmer and the prevalence of disease among corals has increased.
LU: In what areas of Marine Science do you foresee a lot of a career paths and job opportunities?
RP: Fisheries management, ecosystem management, coral reef diseases, and the study of coral reef restoration.
LU: Is there an area of Marine Science that you think is currently being overlooked, and why?
RP: Marine Science management that takes into account cultural and economic issues.
LU: What are some ideas a layperson could take from your work?
RP: One tries to balance resource protection and management with the cultural and heritage needs of the population in the territory of the U.S. Virgin Islands.
LU: If a high school student wanted to go into the fish/wildlife division of planning and natural resources, what kinds of courses would you recommend they take?
RP: Biology, Marine Science, History, Botany, and Math
LU: Do you recommend students interested in your field pursue original research as high school students or undergraduate students? If so, what kind?
RP: I would suggest they study a variety of life sciences so they can see what they want to pursue. Then they can do an internship in a particular life science they find interesting to determine if they would like to pursue it as a career.
Too many interesting people on the ship and so little time! I’m going to interview scientists as we continue on to San Juan, Puerto Rico. Once they leave, I’m continuing on to Mayport, Florida with the ship. During this time, I’ll explore other careers with NOAA.
NOAA Teacher at Sea Alexandra Keenan (Almost) Onboard NOAA Ship Henry B. Bigelow June 18 – June 29
Mission: Cetacean biology Geographical Area of Cruise: Gulf of Maine Date: June 16, 2012
Personal Log
Saludos! My name is Alexandra Keenan, and I teach Astronomy and Physics at Rio Grande City High School. Rio Grande City is a rural town located at the arid edge of the Rio Grande Valley. Because of our unique position on the Texas-Mexico border, our community is characterized by a rich melding of language and culture. Life in a border town is not always easy, but my talented and dedicated colleagues at RGC High School passionately advocate for our students, and our outstanding students gracefully rise to and surmount the many challenges presented to them.
Me in downtown Rio Grande City. Our historic buildings are evocative of the old “Wild West.”Taquerias dot the highway running through our town– evidence of the binational character of the community.
I applied to the NOAA Teacher at Sea program because making careers in science seem real and attainable to students is a priority in my classroom. NOAA, the National Oceanic and Atmospheric Administration, provides a wonderful opportunity for teachers to have an interdisciplinary research experience aboard one of their research or survey ships. I believe that through this extraordinary opportunity, I can make our units in scientific inquiry and sound come alive while increasing students’ interest in and enthusiasm for protecting our ocean planet. I will also be able to provide my students firsthand knowledge on careers at NOAA. I hope to show my students that there is a big, beautiful world out there worth protecting and that they too can have an adventure.
The adventure begins on June 18th when the NOAA ship Henry B. Bigelow departs from Newport, RI. I’ll be on the vessel as a member of the scientific research party. We will be monitoring populations of the school-bus-sized North Atlantic right whale by:
using photo-identification techniques
obtaining biopsies from live whales (wow!)
catching zooplankton
recovering specials buoys that have been monitoring the whales’ acoustic behavior (the sounds they make)
Aerial view of North Atlantic right whale swimming with calf. (photo: NOAA)
Why would we do all of this? Because North Atlantic Right Whales are among the most endangered whales in the world. Historically, they were heavily hunted during the whaling era. Now, they are endangered by shipping vessels and commercial fishing equipment. The data we gather and analyze will help governing bodies make management decisions to protect these majestic animals.
NOAA ship Henry B. Bigelow (photo: NOAA)
The next time you hear from me, it’ll be from the waters of the Gulf of Maine!
NOAA Teacher at Sea
Valerie Bogan
Aboard NOAA ship Oregon II
June 7 – 20, 2012
Mission: Southeast Fisheries Science Center Summer Groundfish (SEAMAP) Survey
Geographical area of cruise: Gulf of Mexico
Date: Sunday June 17, 2012
Weather Data from the bridge: Sea temperature 28 degrees celsius, Air temperature 26.4 degrees celsius, calm seas.
Science and Technology Log
The last piece of equipment I’m going to discuss is the trawl net. This is a very large net which is towed along the bottom for thirty minutes collecting all of the fish and invertebrates in its path. At the end of the time allotment a crane is used to pull the net off of the bottom and ropes are pulled to bring it on deck. The bottom of the bag is tied very tightly to keep it from coming open during the run and also to keep the dolphins from pulling it open so they can steal the catch. I have often seen dolphins swimming alongside the ship. I always thought it was just because they were friendly, but I learned today that it is because they want to get our fish. Once the bag is on deck the bottom is untied and the creatures are released into baskets so the total weight of the catch can be measured. Once the catch has been weighed it is taken into the wet lab and sorted by species. Each species is then weighed and measured so the health of the population can be determined.
The catch from the trawl must be processed and the data inputed into the computer.
Alonzo Hamilton is the watch leader for my shift and has been a NOAA employee for the last thirty years. He studied science in college and currently holds an Associate arts in science degree, a bachelor of science degree in biology, and a master of science degree in biology. His role at NOAA is chief scientist for the deep water survey and chemical hygiene officer for the Pascagoula lab. He enjoys his job but sees places for improvement. For example he wishes that NOAA would implement a whole ecosystem management plan instead of the current plan of managing one species at a time. The part of his job he enjoys the most is when he talks to a group of people about his work and witnesses the light of understanding pass across their faces. He finds that so rewarding because his real joy comes from sharing his knowledge with other people and leading them to a love of the natural world. When asked what his advice for a middle school student would be he replied, “Figure out what you love to do and find a way to get paid for it. You don’t have to make a lot of money to be successful, just pick something you love and make enough so you can support yourself.”
Alonzo verifying the trawl data.
I recently spent some time talking to LT Sarah Harris about her position in the NOAA Corps. This part of NOAA is responsible for supplying each ship with a bridge crew whose officers are charged with protecting the ship and all crew members. Lt. Harris graduated with a Bachelor of Science degree in Marine Science and after a couple of years looking for the right position she decided to look into joining the NOAA Corps. Luckily for her, one of their requirements is that applicants have to have a college degree in science or engineering, so with her marine science degree she was set. She was accepted to the program and set off for the three-month officer training course which is held at the United States Merchant Marine Academy (USMMA) in Kings Point, New York. During the training the recruits learn maritime and nautical skills, shipboard operations and management, small boat handling, marine navigation, ship handling, seamanship and related subjects. Toward the end of training each student is given a list of possible placements and allowed to choose their top three assignments. The NOAA officials then look through the choices and assign each student based on need and student choice. Sarah was really lucky because she received her first choice which was a ship that sailed out of Hawaii. In the NOAA Corps your sea assignment lasts between two and two and a half years. After that first assignment you are given a land assignment which lasts for three years. During land assignments you are expected to help with administrative duties and training. After the land assignment you are given another sea assignment and the cycle continues.
LT Sarah Harris, the operations officer of the Oregon II.
Personal Log
Today is Father’s Day so I would like to take a moment to wish my dad a happy Father’s Day. While it is necessary for these scientific cruises to take the scientists and crew out to sea for weeks on end it is difficult for them to be away from the people they love. So if you are at home and your dad is nearby let him know how much he means to you.
Here I am holding a large crab we got from the trawl net.
