Ragupathy Kannan: From Arkansas to the Atlantic, August 1, 2019

NOAA Teacher at Sea

Ragupathy Kannan

Aboard NOAA Ship Gordon Gunter

August 14 – 30, 2019


Mission: Summer Ecosystem Monitoring

Geographic Area of Cruise: Northeast Atlantic Ocean

Date: August 1, 2019

Weather Data from the Bridge

I’ll update this when I get on board.


Greetings from land-locked Arkansas!

I am thrilled at the chance to embark on an adventure of a lifetime. In the latter half of August, I will be aboard NOAA Ship Gordon Gunter assisting scientists on a Summer Ecosystem Monitoring Survey of the Northeast U.S. Continental Shelf Ecosystem.  I am particularly excited about surveying for marine mammals and sea turtles, although a lot of our work will involve monitoring spatial distribution of plankton.  I cannot wait to learn novel techniques and measurements that I can later incorporate into my classes at the University of Arkansas—Fort Smith. 

While aboard NOAA Ship Gordon Gunter I will blog about my experiences.  My students will follow my blogs and hopefully learn a lot from them.  I hope to make my blog postings fun and informative at the same time.  I will cater to a broad audience, from biology majors and non-majors (college students), to even some school children who are keen on following me and exploring potential science careers.  So don’t be offended if I define basic terms or explain concepts you may have learned decades ago!    

Science and Technology log

I will be embarking on an Ecosystem Monitoring mission.  As my ecology students should know, the term ecosystem refers to a community of organisms along with their physical (or abiotic) environment.  And a community is a group of organisms living and interacting in an area.  To monitor the Northeast U.S. Continental Shelf ecosystem, we will take extensive data on various components, both biotic (biological) and abiotic (physical).  Such measurements are important because they alert us of possible changes in our environment and what that could mean to our well being and that of other life forms.  In effect, we keep a finger on the pulse of our planet.

What is continental shelf?  It’s the relatively shallow (generally up to about 100m or 330 feet depth) area of seabed around land.  Much of this was exposed during glacial periods when water was locked up as ice. This zone teems with life because of its shallow nature, which allows light to penetrate and photosynthesis to occur.  It is therefore vital for the fisheries industry in which many coastal human communities depend on for livelihood.

The Project Instructions document we were all sent (by the Chief Scientist, Dr. Harvey Walsh) indicates that the principal objective of the survey is to assess the “hydrographic, planktonic, and pelagic components” of the ecosystem.  Hydrography (Ancient Greek–hydor, “water” and graphō, “to write”) is a branch of the applied sciences that deals with measurements and descriptions of the physical features of water, like ocean currents and temperature.  Plankton (Greek—errant or wanderer) are organisms, both plants and animals, in the water that drift in the currents (most of them are microscopic).  Pelagic (Greek—of the sea) means oceanic, or belonging to the open seas.

I will be part of an elite multi-disciplinary team, meaning, we will have experts from various disciplines of science. We will be measuring the distribution of water currents and water properties, plankton, sea turtles, sea birds, and marine mammals.  Much of my career I have focused on ecology and behavior of vertebrates, especially birds.  The chance to learn hands-on and in-depth on aspects like water chemistry and plankton biology challenges and excites me.  It gets me out of my comfort zone and has the potential to make me a better-rounded biologist.  After all, I regularly teach the impacts of global warming and ocean acidification on coral reef organisms.  Can there be a better way to hone my teaching skills than actually do these studies hands-on, in the company of world’s leading experts, in a state-of-the-art research ship?

Since much of the survey focuses on measuring plankton distribution and abundance, it begs the question: 

Why are plankton important?

plankton
The wonderfully diverse, beautiful plankton. From planktonchronicles.org

Well, consider this.  Phytoplankton, the plant-like photosynthetic drifters, produce half of all oxygen on earth.  That’s about the same as ALL oxygen produced by land plants!  So that alone should convince you why they are vital. 

But there is more.  Their productivity (meaning, photosynthetic activity that converts sun’s energy into fuel) forms the energetic foundation of the food pyramid, and most of life in sea depends on it. 

So, you take away plankton, and much of oceanic life will collapse.  No fish, no whales, no sea turtles, no sea birds.  Ultimately it will affect all life on earth, including humans. 

The disturbing news is, plankton are in trouble.  Phytoplankton have declined 40% since the 1950s.  Since the beginning of the industrial age, they have dwindled about 1% a year.  There seems a connection between warming waters and this decline.  In the North Atlantic, the melting of Greenland ice has changed the physics and chemistry of ocean waters.  This has resulted in a decline in ocean circulation and its upwelling of nutrients that the phytoplankton depend on. 

So as you read this and take breaths of air, contemplate this: that oxygen you just took in probably came from phytoplankton.  That’s why we need to start with measuring them to monitor our planet’s health.  Our future depends on their well-being!

So I will be blogging quite a bit on these minuscule creatures—what kinds there are out there, how they appear, how to measure their abundance, and so on.  Stay tuned.

Personal Log

For nearly 40 years, I have been mainly a terrestrial ecologist.  I love taking people outdoors and making them into naturalists and field biologists.  My forays into the oceanic realm have been limited.  I once went on a sea birding cruise, which I described in this article.

birding in Trinidad
Here I am leading a birding outing in Trinidad

Earlier, in my college days, I did a number of “turtle walks” – 10 km walks along the beach in my hometown of Chennai, India, to collect Olive Ridley Seaturtle eggs and relocating them to a protected hatchery.  Since 2009, I have taught a tropical biology course in Trinidad, West Indies, where I take the class to a remote beach to observe massive Leatherback Seaturtles nest. A letter of mine on this appeared in the September 2009 issue of National Geographic (below).

National Geographic Note
National Geographic Note by Ragupathy Kannan

Kannan and sea turtle
Here I am with my tropical biology class and a nesting Leatherback Sea Turtle in Trinidad–note the translucent spot on top of head, believed to let light in and help them navigate

So, my exposure to the other 70% of the earth’s surface, the ocean, has been rather limited.  I hope that this NOAA program helps in my quest to fill that void.

My home for two weeks – NOAA Ship Gordon Gunter

NOAA Ship Gordon Gunter
NOAA Ship Gordon Gunter. From http://www.omao.gov.

This is an ultramodern oceanographic research vessel whose main mission is to study marine mammals and other living resources.   “Bigeye” 25 x 150 binoculars are used by scientists to scan for marine mammals.  This includes a scale to enable distance measurement. A hydrophone array is towed to hear and record marine mammal sounds 24 hours a day. 

She was once USNS Relentless, designed to assist the US Navy in collecting underwater acoustical data in support of Cold War anti-submarine warfare operations. After the end of the Cold War, she was transferred to NOAA. In 2010, NOAA used this ship to define the subsurface plume near the BP Deepwater Horizon site. 

I am honored to be assigned to this vessel. I hope you will join me and enjoy and learn from my adventure out in the seas in this amazing ship.

Martha Loizeaux: Sea You Soon, August 30, 2018


Michelle Greene: Meet the Beakers, July 26, 2018

NOAA Teacher at Sea

Michelle Greene

Aboard NOAA Ship Gordon Gunter

July 19 – August 3, 2018

 

Mission: Cetacean Survey

Geographic Area: Northeast U.S. Atlantic Coast

Date: July 26, 2018

 

Latitude: 40° 0.989″ N

Longitude: 67° 30.285″ W

Sea Surface Temperature: 22.1° C (71.8° F)

Sailing Speed: 4.65 knots

 

Science and Technology Log

Premier marine ecologist Dr. Robert Pitman is a member of our cruise.  He works at the NOAA Fisheries at the Southwest Fisheries Science Center in the Marine Mammal and Turtle Division.  He has traveled the world in search of cetaceans, turtles, flying fish, and seabirds.  Currently he is doing extensive work with killer whales.  Dr. Pitman has viewed almost all of the 80 plus species of whales known to man; however, seeing some of the Mesoplodon beaked whales in person has been elusive… until now.  Dr. Pitman gave an excellent presentation on the different species of beaked whales that we might to see in the North Atlantic Ocean.

Blainville’s Beaked Whale (Mesoplodon densirostris)

Blainville's Beaked Whale
Blainville’s Beaked Whale

The Blainville’s beaked whale was first identified by Frenchman Henri de Blainville in 1817 from a piece of a jaw.  The average length of a Blainville’s beaked whale is 4.4 meters.  The most prominent feature of the whale is a high arching jaw. Blainville’s beaked whales have scars from raking which heal white.  Males are very aggressive and proud.  Dr. Pitman stated, “They want a pair of horns but only have a pair of teeth.”  They leave deep scars with their pairs of teeth, because they will savagely charge each other.  Sometimes barnacles will settle on their teeth.  The head of a Blainville’s beaked whale is flat to expose the teeth.

Cuvier’s Beaked Whale (Ziphius cavirostris)

Cuvier's Beaked Whale
Cuvier’s Beaked Whale

The Cuvier’s beaked whale was first identified by Frenchman Georges Cuvier from a skull in 1823.  The skull had a large cavern in the head which was the reason for the name cavirostris (cavi means hollow or cavernous in Latin).  Cuvier’s beaked whales also go by the name of goose beaked whale.  The whale can grow to a length of seven meters.  Cuvier’s beaked whales have the most variable coloration.  Some Cuvier’s will be grey in color while others may be reddish brown in color.  They have white sloping melons.

Gervais’ Beaked Whale (Mesoplodon europaeus)

Gervais' Beaked Whale
Gervais’ Beaked Whale

The Gervais’ beaked whale was first identified by Frenchman Paul Gervais in 1855.  The average size of a Gervais’ beaked whale is 4.8 meters.  The prominent feature of the Gervais’ beaked whale is the vertical striping along its back along with a dark band just behind the melon.  A white circular spot is located just below the melon.  The dorsal fin is dark.  The male Gervais’ beaked whale has one set of teeth located about one-third of the way back from the tip of the beak.  Males turn dark and lose their striping with age.  Males also rake each other; however, scars from the encounters re-pigment a darker color.

Sowerby’s Beaked Whale (Mesoplodon bidens)

Sowerby's Beaked Whale
Sowerby’s Beaked Whale

The Sowerby’s beaked whale was first identified by Englishman James Sowerby in 2804.  The average size of a Sowerby’s beaked whale is 5.5 meters.  They are one of the few whales that have a long beak.  Males have one pair of teeth that are located about two-thirds of the way back from the tip of the beak (or rostrum).  Males have make scratch marks along their backs; however, since the teeth are positioned so far back, scratch marks are from just one tooth and not a pair which would create parallel tracks.  Scientists believe the scarring is due to male competition.  The dorsal fin is located approximately two-thirds of the way along the back.  These whales are not very aggressive and more than one male will be seen in a group.  These animals do not usually travel alone unless it is a male.

True’s Beaked Whale (Mesoplodon mirus)

True's Two
True’s Beaked Whale Photographed on Our Cruise

True's Beaked Whales
True’s Beaked Whales

The True’s beaked whale is the dominant subject of study of this cruise.  The True’s beaked whale was first identified by American Frederick True in 1913.  Due to his excitement over his discovery of the marine mammal, he named it mirus, which means wonderful in Latin.  A True’s beaked whale can grow to be about 5.4 meters.  The identifying features of a True’s beaked whale include: a dark band behind the melon, a large light spot behind the dark band, a pale melon, two tiny flippers, dorsal fin that is small and triangular,  and for males two tiny teeth at the front of the rostrum.  These whales will have paired parallel scarring because their teeth are so close together.

 

Personal Log

First and foremost, I am in awe every day at the different things I see in nature on this cruise.  I have seen so many birds that I cannot remember one from the other… not to mention the dolphins.  I did not know there were so many kinds of dolphins.  I watched the television series “Flipper” when I was a little girl, and now I can say I have seen a bottlenose dolphin in person.  I think the scientists get almost as excited as I do about seeing an animal even though they have probably seen them hundreds, if not thousands, of times.  Nature is always amazing no matter how many times you see it.

During Dr. Pitman’s presentation, I was captivated by the way he spoke about the whales like they were his best friends he had known forever.  I found out why.  He has spent most of his life studying them.  Dr. Pitman is an amazing resource for me on this cruise.  Being a marine mammal observer newbie, Dr. Pitman took the time to answer all of my questions about whales.  I really value the conversations I have had with a famous whale lover.

The weather has not been ideal for marine mammal observation for several days.  If the swell is too high, it makes it hard to see the animals, because they can breach in the waves where we cannot see them.  The fog also makes it difficult to see the animals, and it is not safe on the flying bridge if it is raining.  During times of foul weather, the scientists are busily working on projects except for the seabirder.  The seabirder sees several birds during foul weather.  The chief scientist, Dr. Danielle Cholewiak, has assembled an international crew of scientists who are as passionate as she is about beaked whales.

During the foul weather when people are not working on other projects, the galley is place to be.  The scientists have taught me how to play a card game called Peanut.  It is a wild version of a multiplayer solitaire.  I am usually pretty good at catching on how to play card games, so learning another game was fun.  It gets fast and furious, and you cannot be faint of heart.  The first person to 100 wins, but the person with the lowest score which can be negative also gets to be the winner of the lowest score.  Sometimes even a NOAA Corps officer will join in on the excitement.  All kinds of fun happens on board the Gordon Gunter!

One of the best experiences I have had so far on this cruise is talking with the crew.  They are from all over the country and take their work very seriously.  As different NOAA Corps officers on board get promoted, they may not stay with the Gordon Gunter and may move to other ships.  Most of the crew, however, sticks with the Gordon Gunter.  I thought when we went on the cruise that we were basically going on a “fishing” trip to watch whales and dolphins and no machinery would be on board.  Oh how I was wrong!  There are several pieces of heavy machinery on board including a crane and a wench.  The boatswain is in charge of the anchors, rigging, and other maintenance including the heavy machinery.  Boatswain is not a term I was familiar with before this cruise.  The word is pronounced like “Bosun” not “Boat Swain.”  Boatswain Taylor is the first one I see in the mornings and last one I see at night.  He works tremendously hard to make sure the “work” of the ship is done.

 

Did You Know?

The Smithsonian National Museum of Natural History Marine Mammal Program created a beaked whale identification guide.  Check out the website: http://vertebrates.si.edu/mammals/beaked_whales/pages/main_menu.htm

Animals Seen

  1. Audubon’s Shearwater Bird (Puffinus iherminieri)
  2. Barn Swallow Bird (Hirundo rustica)
  3. Blue Shark (Prionace glauca)
  4. Brown Booby Bird (Sula leucogaster)
  5. Brown-headed Cowbird (Molothrus ater)
  6. Common Dolphin (Delphinus delphis)
  7. Cory’s Shearwater Bird (Calonectris diomedea borealis)
  8. Cuvier’s Beaked Whale (Ziphius cavirostris)
  9. Fin Whale (Balaenoptera physalus)
  10. Great Shearwater Bird (Puffinus gravis)
  11. Leach’s Storm Petrel Bird (Oceanodroma leucorhoa)
  12. Parasitic Jaeger Bird (Stercorarius parasiticus)
  13. Pilot Whale (Globicephala)
  14. Pomarine Jaeger Bird (Stercorarius pomarinus)
  15. Portuguese Man O’war (Physalia physalis)
  16. Pygmy Sperm Whale (Kogia breviceps)
  17. Red-billed Tropicbird (Phaethon aethereus)
  18. Risso’s Dolphin (Grampus griseus)
  19. Spotted Dolphin (Stenella frontalis)
  20. South Polar Skua Bird (Catharacta maccormicki)
  21. Sowerby’s Beaked Whale (Mesoplodon bidens)
  22. Sperm Whale (Physeter macrocephalus)
  23. Striped Dolphin (Stenella coeruleoalba)
  24. True’s Beaked Whale (Mesoplodon mirus)
  25. White-faced Storm Petrel Bird (Pelagodroma marina)
  26. Wilson’s Storm Petrel Bird (Oceanites oceanicus)

Vocabulary

  1. Barnacles (balanus glandula) – sticky crustaceans related to crabs and lobsters that permanently stick themselves to surfaces
  2. Blowhole – similar to “nostrils” in humans which sits on top of the head to make it easier for cetaceans to breath without breaking their swimming motion.
  3. Dorsal fin – a fin made of connective tissue that sits on the back of a whale believed to be used for balance, making turns in the water, and regulating body temperature
  4. Fluke – a whale’s tail is comprised of two lobes made of tough connective tissue called flukes which help it move through the water
  5. Melon – an oil-filled sac on the top of a beaked whale’s head that is connected it vocal chords.  The melon helps the whale to make clicks which help it to find food.
  6. Rostrum – snout or beak of a whale
  7. Winch – a machine that has cable that winds around a drum to lift or drag things

 

Photograph References

“Beaked Whale Sets New Mammalian Diving Record.” The Guardian. 27 March 2014. https://www.theguardian.com/science/2014/mar/27/beaked-whale-new-mammalian-dive-record

“Blainville’s Beaked Whale (Mesoplodon denisrostris).” NOAA Fisheries: Species Directory.  https://www.fisheries.noaa.gov/species/blainvilles-beaked-whale

“Gervais’ Beaked Whale (Mesoplodon europaeus).” NOAA Fisheries: Species Directory. https://www.fisheries.noaa.gov/species/gervais-beaked-whale

“Sowerby’s Beaked Whale (Mesoplodon bidens).” Ocean Treasures Memorial Library: The Legacy Continues.   http://otlibrary.com/sowerbys-beaked-whale/

Photographs of True’s beaked whales taken by Salvatore Cerchio.  Images collected under MMPA Research permit number 21371.

 

Martha Loizeaux: Cool Science Tools and Drifter Buoy! August 26, 2018


Martha Loizeaux: Salp Confidence, August 24, 2018

NOAA Teacher at Sea

Martha Loizeaux

Aboard NOAA Ship Gordon Gunter

August 22-31, 2018

 

Mission: Summer Ecosystem Monitoring Survey

Geographic Area of Cruise: Northeast Atlantic Ocean

Date: August 24, 2018

 

Weather Data from the Bridge

Latitude: 40.15 N

Longitude: 68.71 W

Wind direction: NE

Wind speed: 14 knots

Water temperature: 23.8 degrees C

Air pressure: 1023 millibars

Air temperature: 24.2 degrees C

Water depth: 165 meters

 

Science and Technology Log

What an exciting first full day out at sea!  I have been so grateful that our science team has allowed me to be completely hands-on and take responsibility for some of the science happening on the ship.  In addition to checking the Imaging Flow Cytobot (IFCB) periodically, I am very much involved in the data collection at each of our stations.

There are specific stations along our course where scientists need to collect data.  The crew announces when we are close to the station.  At that time, along with another volunteer on watch, I don my foul weather gear to head out to the deck.  We get pretty splashed as we are working with the equipment so the gear is a good idea.  We help the crew as they lower “bongo nets” into the water using a cable and pulley system.  Can you guess why they are called bongo nets?  These nets have a very fine mesh that helps collect, you guessed it, PLANKTON!

bongos on deck
bongo nets waiting on the deck to be deployed

bongos in water
The bongo net and the “baby” bongo net being deployed.

We also help raise the bongo nets after several minutes dragging them through the water.  We rinse all of the plankton down to the bottom of the net and then open up the end of the net to allow all of the plankton into a sieve where we will collect it.  I have been surprised by the amount of jelly-like animals that have shown up in the nets!

Then it’s time to use special liquids (ethanol or formalin) and water to wash the plankton into collection jars. These chemicals will preserve the plankton so scientists can study it back in the lab!

It has been so much fun working with this equipment, asking the scientists questions about the plankton, and being a part of it all.

Harvey, our chief scientist, explained to me that many scientists can use the plankton samples for all different studies.  Some of the samples can be used to study larval fish (baby fish) otoliths, the tiny ear bones that can verify the identification of larval hake using genetics.  Knowing this, scientists can do research to determine where the larval fish were born!  What a great example of the beginning of a scientific

Hake larvae
Some examples of larval hake. Photo courtesy of Harvey Walsh

experiment!:

Question – Where are most larval red hake fish born in the Northeast Atlantic Ocean?

Research – Scientists might research currents in the area, wind patterns, and other things that would push plankton from place to place.  They also would research what other scientists have already learned about larval red hake.

Hypothesis – Most larval red hake fish are born in the Southern New England and Georges Bank regions in the northeast US shelf.

Didn’t I tell you plankton were amazing?

At some of the stations, we also lower Niskin bottles and CTD instruments into the water to collect a lot more data!  More on that to come!

Martha and bongos
Here I am getting ready to deploy the bongo nets.

rinsing nets
Jessica and I rinsing the bongo nets.

plankton on sieve
Plankton looks tiny when we filter it into a sieve.

plankton samples
Our plankton samples after being rinsed into the jars.

 

NOAA Corps Corner

Today I spoke with Lola Ajilore, Officer with NOAA Corps, and asked her a few questions about her important work.  A pod of humpback whales off the bow stole the show! Here’s what we got in before the exciting interruption…

Me – Tell me more about your roles on the ship.

Lola – I am the Navigation Officer, Medical Officer, Environmental Officer, Ship Store Officer, and Morale Officer.  As you can see, we all have multiple roles on the ship.  As Navigation Officer, for example, I plot charts, track directions, and coordinate with the Operations Officer and Commanding Officer on track lines and routes that are requested by the scientists.

Me – Where do you do most of your work?

Lola – I am always with NOAA Ship Gordon Gunter.  The ship’s home port is in Pascagoula, Mississippi.  Our missions often take place in the Gulf of Mexico but we also run these Northeast Shelf cruises for Ecosystem Monitoring every year.

Me – What kind of training is needed for your line of work?

Lola – We undergo an application process that includes several interview steps.  We then train at the Coast Guard Academy.  Much of our training parallels that of the Coast Guard, but we also do our own NOAA Corps training as well.

Me – What tool do you use in your work that you could not live without?

Lola – Radar!  [Radar aids navigation by detecting things that are far away such as an island or another ship]

Nav officer
Lola as Navigation Officer.

humpback from afar
Can you see the little black dot in the middle of the picture? It’s a humpback whale! It looked a lot closer in real life.

 

Personal Log

 

sunset view
Sunset on NOAA ship Gordon Gunter

I cannot believe the amazing views that we have on this ship 24 hrs. a day!  The water has been super calm and the sunrise, sunset, breaching whales, and pods of dolphins have taken my breath away.

Yesterday was emergency drill day!  Libby, our Operations Officer, had given us directions on how to respond to emergencies prior to leaving the

Mustering on the deck
Mustering on the deck during the emergency fire drill.

dock.  There are emergency drills for a fire (just like at school!), abandon ship (in the case that we had to immediately leave the ship in an emergency), and man overboard.

We practiced a fire drill and an abandon ship drill.  The Officers on the ship sounded the alarm, using a different number and duration of blast based on the type of emergency.  For a fire, we all “mustered” (got together in one place) in assigned areas.  All of the science team members mustered together.  For abandon ship, we all mustered near the life boats along with our life jackets and immersion suits (suits that can help you survive if you end up in the water).

Martha in immersion suit
Here I am in my immersion suit!

 

The fun part of the abandon ship drill was donning our immersion suits in one minute or less!  This was a great thing to practice so if there ever was a real emergency, we would know how to put on the suit.  I thought I looked pretty cool in my immersion suit.

 

Did You Know?

Salps are barrel-shaped planktonic tunicates.  Our plankton bongo nets always contain some jelly-like salps. Where I live in the Florida Keys, we see mangrove tunicates growing on mangrove roots.  Here in the open ocean, salps stick together in long colonies and drift!  Sometimes there are so many salps in our nets, we have to filter them out with sieves and put them back in the water.

salps from web
An example of a colony of salps. Photo courtesy of NOAA

 

Something to Think About

We have been finding up to 4,000 phytoplankton in 5 mL of water.  A gallon of water is equal to about 3785 mL.  There is about 352,670,000,000,000,000,000 gallons of water in the Atlantic Ocean.  How much plankton is in the Atlantic?  You do the math.

plankton from web
This is what some plankton look like under the microscope. Photo courtesy of NOAA