Julia Harvey: The Nearest Land is 3 Miles Down, June 28, 2016

NOAA Teacher at Sea

Julia Harvey

Aboard NOAA Ship Hi’ialakai

June 25 – July 3, 2016


Mission: WHOI Hawaii Ocean Timeseries Station (WHOTS)

Geographical Area of Cruise: Pacific Ocean, north of Hawaii

Date: June 28th, 2016


Weather Data from the Bridge
(June 28th at 2pm)

Wind Speed: 12 knots

Temperature: 26.2 C

Humidity: 81%

Barometric Pressure: 1016.3 mb


Science and Technology Log

The Aloha Station is about 100 miles north of Oahu, Hawaii and was selected because of its closeness to port but distance from land influences (temperature, precipitation etc).  The goal is to select a site that represents the north Pacific, where data can be collected on the interactions between the ocean and the atmosphere. Woods Hole Oceanographic Institution Hawaii Ocean Time Series (WHOTS) has used this site for research since 2004.  You can find real time surface and meteorological data and archived data at the WHOTS website.

We are stationed in the vicinity of mooring 12 and 13 in the Aloha Station to begin intercomparison testing.  CTD (conductivity/temperature/depth) casts are conducted on a regular schedule. This data will help align the data from mooring 12 to mooring 13. If CTDs don’t match up between the two moorings then efforts will be made to determine why.

Mooring 13 is being inspected to make sure sensors are working. Photographs have been taken to determine measurement height of the instruments and where the water line is.

When I was aboard the Oscar Dyson, there were multiple studies going on besides the Walleye Pollock survey. The same is true on the Hi’ialakai. The focus is on the mooring deployment and recovery but there are a professor and graduate student from North Carolina State University who are investigating aerosol fluxes.

Professor Nicholas Meskhidze earned his first Physics degree from Tbilisi State University (Georgia).  He completed his PhD at Georgia Institute of Technology (USA).  He is now an Associate Professor at NC State University Department of Marine Earth and Atmospheric Sciences.

Meskhidze’s study on this cruise is looking at sea spray aerosol abundance in marine boundary layer and quantifying their flux values. Sea spray is formed from breaking waves. Sea spray analysis begins by collecting the aerosol. Using electrical current, particles of a given size (for example 100 nanometer (nm)) are selected for. This size represents the typical size of environmental climatically important particles (70-124 nm). The next step is to remove all other particles typically found in the marine boundary layer, such as ammonium sulfate, black carbon, mineral dust and any organics. The remaining particles are sea salt.

Sea spray analysis
Dr. Nicholas Meskhidze with the sea spray analysis equipment

Meskhidze is looking at the fluxes of the salt aerosols.  Sea salt aerosols are interesting.  If a salt aerosol is placed in 80% humidity, it doubles in size.  But then placed in 90% humidity, it quadruples in size. Due to their unique properties, sea salt aerosols can have considerable effect on atmospheric turbidity and cloud properties.

Aerosols are key components of our climate but little is known about them. Climate models are used to predict future climatic change, but how can one do this without understanding a key component (aerosols)?

little is known
Source: IPCC Fourth Assessment Report, Summary for Policy Makers


Personal Log

The galley (ship’s kitchen) is a happening place three times a day.  The stewards are responsible for feeding 30-40 people.

Chief Steward Gary Allen is permanently assigned to the Hi’ialakai. He has worked for NOAA for 42 years and he has stories to tell. He grew up in Tallahassee, Florida and his early work was at his father’s BBQ stand. He attended Southern University on a football scholarship and majored in food nutrition. After an injury, he finished school at Florida A & M. He worked for a few years in the hotel food industry, working his way up to executive chef. Eventually he was offered the sous chef job at Brennan’s in New Orleans. He turned it down to go to sea.

Chief Steward Allen Gary
Chief Steward Allen Gary

In 1971, he sailed for the first time with NOAA. The chief steward was a very good mentor and Gary decided to make cooking at sea his career. He took a little hiatus but was back with NOAA in 1975, where he would spend 18 years aboard the Discoverer and would become chief steward in 1984. He would sail on several other ships before finding his way to the Hi’ialakai in 2004.

In the 42 years at sea, Gary has seen many changes. Early in his career, he would only be able to call home from ports perhaps every 30 days. Now communication allows us to stay in contact more. He is married to his wife of 43 years and they raised 3 daughters in Seattle.

I asked him what he enjoys the most about being at sea. He has loved seeing new places that others don’t get to see. He has been everywhere, the arctic to Antarctica. He enjoys the serenity of being at sea. He loves cooking for all the great people he meets.

I met Ava Speights aboard the Oscar Dyson in 2013 when she was the chief steward and I was participating in the walleye pollock survey as a Teacher at Sea. She has been with NOAA for 10 years.

Ava Speights (on the right) and me
Ava Speights (on the right) and me

She and a friend decided to become seamen. Ava began working in a shipyard painting ships. In 2007, she became a GVA (general vessel assistant) and was asked to sail to the Bahamas for 2 weeks as the cook. This shifted her career pathway and through NOAA cooking classes and on the job training, she has worked her way up to chief steward.

She is not assigned to a specific ship. She augments, meaning she travels between ships as needed. She works 6 months of the year, which allows her to spend time with her 2 daughters, 1 son, 2 stepdaughters and 4 grandchildren. Her husband is an engineer with NOAA. Her niece is an AB (able bodied seaman) on deck. Her son is a chief cook for Seafarer’s.  And her daughter who just graduated high school will be attending Seafarer’s International Union to become a baker.  Sailing must run in her family.

She loves to cook and understands that food comforts people. She likes providing that comfort.  She has also enjoyed traveling the world from Africa to Belgium.

2nd Cook Nick Anderson
2nd Cook Nick Anderson

Nick is 2nd cook and this is his first cruise with NOAA. He attended cooking school in California and cooked for the Coast Guard for 6 years where he had on the job training. In 2014, he studied at the Culinary Institute of America and from there arrived on the Hi’ialakai. He also is an augmenter, so he travels from ship to ship as Ava does.




Did You Know?

The Hi’ialakai positioned mooring 13 in an area with a 6 mile radius known as the Aloha Station. Check out all of the research that takes place here at Station Aloha. There is a cabled observatory 4800 meters below the ocean surface. A hydrophone picks up on sounds and produces a seismograph. Check the results for the night the anchor was dropped.

Seismograph during Mooring Deployment

Click here to hear whales who pass through this area in February.

Pacific Sunset
Pacific Sunset

Sue Cullumber: Can’t Wait to Head Out As a NOAA Teacher at Sea! May 21, 2013

NOAA Teacher at Sea
Sue Cullumber
(Soon to be) Onboard NOAA Ship Gordon Gunter
June 5– 24, 2013

Mission: Ecosystem Monitoring Survey
Date: 5/21/13
Geographical area of cruise:  The continental shelf from north of Cape Hatteras, NC, including Georges Bank and the Gulf of Maine, to the Nova Scotia Shelf

My students on a field-trip to the desert.
Howard Gray School in Scottsdale, Arizona.

Personal Log:

Hi my name is Sue Cullumber and I am a science teacher at the Howard Gray School in Scottsdale, Arizona. Our school provides 1:1 instruction to students with special needs in grades 5-12 and I have been teaching there for over 22 years!  In less than two weeks I will be heading out to the Atlantic coast as a NOAA Teacher at Sea.  I am so excited to have this opportunity to work with the scientists aboard the NOAA ship Gordon Gunter.

I applied to the NOAA Teacher at Sea program for the following reasons:

First, I feel that directly experiencing “Science” is the best way for students to learn and make them excited about learning. To be able to work directly with NOAA scientists and bring this experience back to my classroom gives my students such an amazing opportunity to actually see how science is used in the “real world”.

Visit to Española Island – photo by Pete Oxford
Students holding “Piggy” and our other baby Sulcata tortoises.

Secondly, I love to learn myself, experience new things and bring these experiences back to my students. Over the past several years I have had the opportunity to participate in several teacher fellowships.  I went to the Galapagos Islands with the Toyota International Teacher Program and worked with teachers from the Galapagos and U.S. on global environmental education. From this experience we built an outdoor habitat at Howard Gray that now houses four tortoises.  Students have learned about their own fragile desert environment, animal behavior and scientific observations through access to our habitat and had the opportunity to share this with a school in the Galapagos. I worked with Earthwatch scientists on climate change in Nova Scotia and my students Skyped directly with the scientists to learn about the field research as it was happening. Last summer I went to Japan for the Japan-US Teacher Exchange Program for Education for Sustainable Development. My students participated in a peace project by folding 1000 origami cranes that we sent to Hiroshima High School to be placed in the Hiroshima Peace Park by their students. We also  held a Peace and Friendship Festival for the community at Howard Gray.

Completion of the 1000 cranes before sending them to Hiroshima.
Japanese teachers learn about our King Snake, Elvis, from the students.

This year we had a group of Japanese teachers visit our school from this program and students taught them about many of the sustainable activities that we are working on at school.  Each has brought new ideas and amazing activities for my students to experience in the classroom and about the world.

Dusk at the south rim of the Grand Canyon.

Lastly, Arizona is a very special place with a wide variety of geographical environments from the Sonoran Desert (home of the Saguaro) to a Ponderosa Pine Forest in Flagstaff and of course the Grand Canyon!  However, we do not have an ocean and many of my students have never been to an ocean, so I can’t wait to share this amazing, vast and extremely important part of our planet with them.

So now I have the chance of a lifetime to sail aboard the NOAA ship Gordon Gunter on an Ecosystem Monitoring Survey. We will be heading out from Newport, RI on June 5th and head up the east coast to the Gulf of Maine and then head back down to Norfolk, Virginia. Scientists have been visiting this same region since 1977 from as far south as Cape Hatteras, NC to the an area up north in the Bay of Fundy (Gulf of Maine between the Canadian provinces of New Brunswick and Nova Scotia).  They complete six surveys a year  to see if the distributions and abundance of organisms have changed over time. I feel very honored to be part of this research in 2013!

Gordon Gunter
NOAA Ship Gordon Gunter (photo credit NOAA)

One of the activities I will be part of is launching a drifter buoy. So students are busy decorating stickers that I will be able to put on the buoy when I head out to sea.  We will be able to track ocean currents, temperature and GPS location at Howard Gray over the next year from this buoy.  Students will be studying the water currents and weather patterns and I plan to hold a contest at school to see who can determine where the buoy will be the following month from this information. While out at sea my students will be tracking the location of the Gordon Gunter through theNOAA Ship Tracker and placing my current location on a map that one of my students completed for my trip.

Spending time with my husband, Mike, and son, Kyle.

Outside of school, I love to spend most of my free time outdoors – usually hiking or exploring our beautiful state and always with my camera!  Photography is what I often call “my full-time hobby”.  Most of my photos are of our desert environment, so I look forward to all amazing things I will see in the ocean and be able to share with my husband and son, students and friends!  One of my passions is to use my photography to provide an understanding about the natural world, so I am really looking forward to sharing this fantastic adventure with everyone through my blog and photos!

Enjoying the view during one of my hikes in the Sonoran Desert.

Gina Henderson: 30 Days of Science in 9 Days… August 21, 2012

NOAA Teacher at Sea
Prof. Gina Henderson
Aboard NOAA Ship Ronald H. Brown
August 19 – 27, 2012

Mission: Western Atlantic Climate Study (WACS)
Geographical area of cruise: Northwest Atlantic Ocean
Date: Tuesday, August 21, 2012

Weather Data: Winds light and variable less than 10 kts. Combined seas from the SW 3-5 ft, lowering to 2-4 ft overnight. Into Wednesday 22nd, winds continue to be light and variable, becoming NE overnight less than 10 kts. 

Science and Technology Log

WACS Field Campaign Update

Greetings from Georges Bank off the coast of New England! This is our first of 2 sampling stations during the Western Atlantic Climate Survey (WACS) field campaign, over the next 9 days. Our current location was chosen due to its high chlorophyll values, indicating productive waters. Shortly after our arrival here approximately 0700 on the 20th, the Sea Sweep instrument was deployed, and aerosol collection began (see picture below). However, for many of the scientists onboard, data collection began almost immediately after disembarking Boston, on the 19th.

The Sea Sweep
Photographs showing the Sea Sweep (top left), deployment of the Sea Sweep (bottom left), and Sea Sweep underway with bubble generation and aerosol collection taking place (right).

Upon my arrival to the ship in Boston, I quickly learned that this field campaign is a little unusual due to the sheer volume of equipment being utilized, and the short nature of the cruise itself. As we disembarked the Coast Guard pier in Boston, a running joke being echoed around the ship was, “30 days of science in 9 days…. ready, set, and GO!”

Science vans on deck
Looking from the bow towards the bridge, not visible in this photograph due to the mobile lab vans that have been installed on the deck for this cruise.

Over 9 mobile research vans were loaded onto the Ron Brown in preparation for this campaign making for a “low-riding ship”, joked our captain at our welcome meeting on the 19th. Each van contains multiple instruments, computers, ancillary equipment and supplies, and they also serve as research labs for the science teams to work in.

During the past two days, I have been making the rounds to each of these lab vans to hear more about the science taking place in each. With the help of the Chief Bosun, Bruce Cowden, I have also been able to shoot some video of these visits. With the assistance of Bruce, I am learning how to stitch these clips together into some fun short video pieces, so stay tuned for more to come!

A Little about the Sea Sweep

The Sea Sweep instrument consists of floating pontoons that hold a metal hood. The hood is mounted on a frame that protrudes below the water line when deployed, with two “frizzles” or “bubble maker” nozzles that air is pumped through to produce freshly emitted sea spray particles. These particles are then collected through two intake pipes attached to the hood, and are piped into the AeroPhys van. From there, samples are collected and also the intake is drawn into other vans for additional measurements.

Comparison of Sea Sweep Data with “the Bubbler”

Aerosol generator
Scientist Bill Keene from University of Virginia talking to me about “the bubbler”.

Sea spray particles are also being produced and collected via another method onboard, allowing for comparison with the Sea Sweep data. The picture below shows bubbles being generated in seawater that is fed into a large glass tower. This is an aerosol generator (a.k.a. “the bubbler”) brought on board by the University of Virginia. Through sampling with both the Sea Sweep and the bubbler, a greater size range and variety of aerosols can be sampled throughout the cruise.

Personal Log

After waiting a day or so for things to settle down and instruments to get up and running, I was eager to dive right in and be put to work on board. After an announcement made by the chief scientist, Trish Quinn, during our first evening meeting I was quickly solicited by a few different people to help with a range of tasks. So far these have included helping change impactor filters necessary for aerosol sampling 3 times a day (1 of these switches has been happening at 0500, making for some early mornings but pretty sunrises), getting raw sea water samples every 2 hours from different sampling points on board, preparing sea water samples for different analysis such as surface tension, and measuring samples for chlorophyll, dissolved organic carbon and particulate organic carbon.

Amongst all the sampling taking place however, it has been nice to take a break every once in a while to enjoy the extremely calm and settled weather we are having. A very memorable moment yesterday occurred when an announcement over the ship’s intercom alerted all aboard to a pod of whales off the port bow. It was nice to see the excitement spread, with both crew and science team members racing to the bow in unison with cameras in tow!

fun pics aboard
Early morning sky after an impactor filter change (left). All hands rush to the bow after whale sighting is announced (right).

Gina Henderson: Introduction, August 15, 2012

NOAA Teacher at Sea
Prof. Gina Henderson
Soon to be aboard NOAA Ship Ronald H. Brown
August 19 – 27, 2012

Mission: Western Atlantic Climate Study (WACS)
Geographical area of cruise: Northwest Atlantic Ocean
Date: Wednesday, August 15, 2012

Introduction: Purpose of the Cruise

Gina Henderson, NOAA Teacher at Sea 2012

Hello from Annapolis, MD! My name is Gina Henderson and I am very excited about my imminent departure to Boston this coming Saturday as part of the NOAA Teacher at Sea program. In Boston  I will rendezvous with the Ronald H. Brown NOAA ship and join the science team to conduct experiments aimed at collecting in situ measurements of ocean-derived aerosols. The purpose of this experiment is to characterize the cloud-nucleating abilities of these aerosols. We also aim to sample atmospheric particles, gases, and surface sea water to assess the impact of ocean emissions on atmospheric composition.

A Little about Me

I am an Assistant Professor in the Oceanography Department at the United States Naval Academy. Here, I teach courses in climate science, physical geography and weather. My research to date has focused on land-atmosphere interactions using computer climate models, understanding the role of snow cover in the hydrologic and global climate system, and the influence of such elements on atmospheric circulation and climate change.

Growing up on the east coast of Ireland, my interest in climatology was awakened from an early age having been exposed to the elements through outdoor pursuits including sailing, travel, and hiking. I have found that sharing my enthusiasm and passion for these sciences, focusing on the application of how they relate to our day-to-day lives and the environment in which we live, is an excellent platform to foster student interest and participation.

Having worked as a sail racing coach in Ireland, and captaining boats in the Caribbean during my undergraduate summers, I was eager to get back to the sport after relocating to Annapolis. Since my arrival at the Academy, I have also been volunteering as a coach for the Varsity Offshore Sailing Team which has been a great experience so far and helped me learn more about my students outside of the classroom.

Midshipman measuring sea surface temperature with a bucket thermometer.

Going into my second year teaching at the Naval Academy, I am excited to get this opportunity to participate in this NOAA field work campaign. Having spent the last few weeks as the science officer for a Yard Patrol cruise, where we took a group of 17 midshipmen and introduced them to various oceanographic and meteorologic instrumentation on board the Oceanography Department’s dedicated Yard Patrol training vessel, I hope to acquire new fieldwork skills and experiences while aboard the Ron Brown and to use such experiences back in Annapolis.

Prof. Henderson giving some history about sea surface temperature measurement throughout the past 200 years.

The timing of this research cruise coincides with the start of the semester back at the Naval Academy. This semester, I am teaching two sections of the upper level major elective course, Global Climate Change. While it will be challenging to be absent from the classroom for the first two weeks of class, I plan on engaging with my students virtually and as close to real-time as communications allow  through this blog.

With this in mind, after a colleague introduces the course policy statement and syllabus next Monday 20 August, I am asking all students to take 10-20 minutes to google the underlined terms in the “Introduction: purpose of this cruise” section above, beginning with the NOAA Teacher at Sea Program. Students should write a brief summary (2-3 sentences) of what they find, focusing on the program goal(s). Students should then research the other underlined terms and write a brief summary (1-2 sentences) of what they should know about these terms from their previous course, SO244: Basic Atmospheric Processes. This assignment will be submitted via email to Prof. Henderson before the beginning of class on Tuesday August 21.

Midshipmen visit the Fleet Weather Center in Norfolk with Prof. Henderson during summer Yard Patrol cruise 2012.

Caitlin Fine: Chemistry Is All Around Us, August 4, 2011

NOAA Teacher at Sea
Caitlin Fine
Aboard University of Miami Ship R/V Walton Smith
August 2 – 6, 2011

Mission: South Florida Bimonthly Regional Survey
Geographical Area: South Florida Coast and Gulf of Mexico
Date: August 4, 2011

Weather Data from the Bridge
Time: 10:32pm
Air Temperature: 30°C
Water Temperature: 30.8°C
Wind Direction: Southeast
Wind Speed:  7.7knots
Seawave Height: calm
Visibility: good/unlimited
Clouds: clear
Barometer: 1012 nb
Relative Humidity: 65%

Science and Technology Log

As I said yesterday, the oceanographic work on the boat basically falls into three categories: physical, chemical and biological. Today I will talk a bit more about the chemistry component of the work on the R/V Walton Smith. The information that the scientists are gathering from the ocean water is related to everything that we learn in science at Key – water, weather, ecosystems, habitats, the age of the water on Earth, erosion, pollution, etc.

First of all, we are using a CTD (a special oceanographic instrument) to measure salinity, temperature, light, chlorophyll, and depth of the water. The instrument on this boat is very large (it weights about 1,000 lbs!) so we use a hydraulic system to raise it, place it in the water, and lower it down into the water.

Lindsey takes a CO2 sample from the CTD

The CTD is surrounded by special niskin bottles that we can close at different depths in the water in order to get a pure sample of water from different specific depths. Nelson usually closes several bottles at the bottom of the ocean and at the surface and sometimes he closes others in the middle of the ocean if he is interested in getting specific information. For each layer, he closes at least 2 bottles in case one of them does not work properly. The Capitan lowers the CTD from a control booth on 01deck (the top deck of the boat), and two people wearing a hard hat and a life vest have to help guide the CTD into and out of the water. Safety first!

Once the CTD is back on the boat, the chemistry team (on the day shift, Lindsey and I are the chemistry team!) fills plastic bottles with water from each depth and takes them to the wet lab for processing. Throughout the entire process, it is very important to keep good records of the longitude and latitude, station #, depth of each sample, time, etc, and most importantly, which sample corresponds to which depth and station.

We are taking samples for 6 different types of analyses on this cruise: nutrient analysis, chlorophyll analysis, carbon analysis, microbiology analysis, water mass tracers analysis and CDOM analysis.

The nutrient analysis is to understand how much of each nutrient is in the water. This tells us about the availability of nutrients for phytoplankton. Phytoplankton need water, CO2, light and nutrients in order to live. The more nutrients there are in the water, the more phytoplankton can live in the water. This is important, because as I wrote yesterday – phytoplankton are the base of the food chain – they turn the sun’s energy into food.

Sampling dissolved inorganic carbon

That said, too many nutrients can cause a sudden rise in phytoplankton. If this occurs, two things can happen: one is called a harmful algal bloom.  Too much phytoplankton (algae) can release toxins into the water, harming fish and shellfish, and sometimes humans who are swimming when this occurs.  Another consequence is that this large amount of plankton die and fall to the seafloor where bacteria decompose the dead phytoplankton.  Bacteria need oxygen to survive so they use up all of the available oxygen in the water. Lack of oxygen causes the fish and other animals to either die or move to a different area. The zone then becomes a “dead zone” that cannot support life. There is a very large dead zone at the mouth of the Mississippi River. So we want to find a good balance of nutrients – not too many and not too few.

The chlorophyll analysis serves a similar purpose. In the wet lab, we filter the phytoplankton onto a filter.

I am running a chlorophyll analysis of one of the water samples

Each phytoplankton has chloroplasts that contain chlorophyll. Do you remember from 4th grade science that plants use chlorophyll in order to undergo photosynthesis to make their own food? If scientists know the amount of chlorophyll in the ocean, they can estimate the amount of phytoplankton in the ocean.

Carbon can be found in the form of carbon dioxide (CO2) or in the cells of organisms. Do you remember from 2nd and 4th grade science that plants use CO2 in order to grow? Phytoplankton also need CO2 in order to grow. The carbon dioxide analysis is useful because it tells us the amount of CO2 in the ocean so we can understand if there is enough CO2 to support phytoplankton, algae and other plant life. The carbon analysis can tell us about the carbon cycle – the circulation of CO2 between the ocean and the air and this has an impact on climate change.

The microbiology analysis looks for DNA (the building-blocks of all living organisms – kind of like a recipe or a blueprint). All living things are created with different patterns or codes of DNA. This analysis tells us whose DNA is present in the ocean water – which specific types of fish, bacteria, zooplankton, etc.

The water mass tracers analysis (on this boat we are testing N15 – an isotope of Nitrogen, and also Tritium – a radioactive isotope of Hydrogen) helps scientists understand where the water here came from. These analyses will help us verify if the Mississippi River water is running through the Florida Coast right now. From a global viewpoint, this type of test is important because it helps us understand about the circulation of ocean water around the world. If the ocean water drastically changes its current “conveyor belt” circulation patterns, there could be real impact on the global climate. (Remember from 2nd and 3rd grade that the water cycle and oceans control the climate of Earth.) For example, Europe could become a lot colder and parts of the United States could become much hotter.

This is an image of the conveyor belt movement of ocean currents

The last type of analysis we prepared for was the CDOM (colored dissolved organic matter) analysis. This is important because like the water mass tracers, it tells us where this water came from. For example, did the water come from the Caribbean Sea, or did it come from freshwater rivers?

I am coming to understand that the main mission of this NOAA bimonthly survey cruise on the R/V Walton Smith is to monitor the waters of the Florida Coast and Florida Bay for changes in water chemistry. The Florida Bay has been receiving less fresh water runoff from the Everglades because many new housing developments have been built and fresh water is being sent along pipes to peoples’ houses. Because of this, the salinity of the Bay is getting higher and sea grass, fish, and other organisms are dying or leaving because they cannot live in such salty water. The Bay is very important for the marine ecosystem here because it provides a safe place for small fish and sea turtles to have babies and grow-up before heading out to the open ocean.

Personal Log

This cruise has provided me great opportunities to see real science in action. It really reinforces everything I tell my students about being a scientist: teamwork, flexibility, patience, listening and critical thinking skills are all very important. It is also important to always keep your lab space clean and organized. It is important to keep accurate records of everything that you do on the correct data sheet. It can be easy to get excited about a fish or algae discovery and forget to keep a record of it, but that is not practicing good science.

It is important to keep organized records

It is also important to stay safe – every time we are outside on the deck with the safety lines down, we must wear a life vest and if we are working with something that is overhead, we must wear a helmet.

I have been interviewing the scientists and crew aboard the ship and I cannot wait to return to Arlington and begin to edit the video clips. I really want to help my students understand the variety of science/engineering and technology jobs and skills that are related to marine science, oceanography, and ships. I have also been capturing videos of the ship and scientists in action so students can take a virtual fieldtrip on the R/V Walton Smith. I have been taking so many photos and videos, that the scientists and crew almost run away from me when they see me pick up my cameras!

Captain Shawn Lake mans the winch

The food continues to be wonderful, the sunsets spectacular, and my fellow shipmates entertaining. Tomorrow I hope to see dolphins swimming alongside the ship at sunrise! I will keep you posted!!

Did you know?

The scientists and crew are working 12-hour shifts. I am lucky to have the “day shift” which is from 8am to 8pm. But some unlucky people are working the “night shift” from 8pm to 8am. They wake-up just as the sun is setting and go to sleep right when it rises again.

Animals seen today…

zooplankton under the dissecting microscope

–       Many jellyfish

–       Two small crabs

–       Lots of plankton

A sampling of zooplankton

–       Flying fish flying across the ocean at sunset

–       A very small larval sportfish (some sort of bluerunner or jack fish)

Some moon jellyfish that we collected in the tow net

Heather Haberman: Science and Life at Sea, July 16, 2011 (post #5)

  • NOAA Teacher at Sea
    Heather Haberman

    Onboard NOAA Ship Oregon II
    July 5 — 17, 2011

Mission:  Groundfish Survey
Geographical Location:  Northern Gulf of Mexico
Date:  Saturday, July 16, 2011

Weather Data from  NOAA Ship Tracker
Air Temperature: 28.5 C   (83 F)
Water Temperature: 27.2 C  (81 F)
Relative Humidity: 82%
Wind Speed: 9.58 knots

Preface:  Scroll down the page if you would like to read my blog in chronological order.  If you have any questions leave them for me at the end of the post.

Science and Technology Log

Question of the day:  When I view your travels aboard the Oregon II on NOAA’s Ship Tracker website it looks as though you go as far as the continental shelf and then turn back towards the shore again.  Why don’t you go into the deep water?

Our groundfish survey course.

Answer:  If you were studying animals in the rainforest you would want to make sure to stay in that specific area.  You wouldn’t want to include Arctic animals in your report which are from a completely different biome.  The same goes for ocean life.  As depth, temperature, and amount of light change in the ocean so do the habitats and the animals that live in them.  On this groundfish survey we are focusing on offshore species that live in “shallow” waters up to 60 fathoms (361 feet).  If we were to go out into the deep water then our reports wouldn’t be as accurate.

Topic of the Day:  Science

What is science?  Can you come up with a good definition?  Difficult isn’t it.  There are many definitions that refer to science as the study of the natural world, systematic knowledge, etc. but something that’s often left out of the definition is that it can be used to make predictions.

We have all been conducting scientific experiments since we were old enough to formulate questions about our environment: “Will this ball bounce?”,  “Can I get it to bounce higher?”,  “Will ball #1 bounce higher than ball #2?”  The knowledge we have collected from these experiments allow us to make accurate predictions.  “I think ball #2 would be better for playing tennis than ball #1.”  Now keep in mind, the more we know about a subject, the better our predictions will be.

The more information we have the better our predictions become. Image: http://www.exploratorium.edu/baseball/bouncing_balls.html

Did you know that the ocean covers over 70% of the Earth’s surface but more than 95% of it remains unexplored.  This means we have a lot to learn if we want to accurately predict the relationships between the ocean, the atmosphere and the living things on our planet. To address these gaps in our knowledge, thousands of people working for the government, universities and private industries, are trying to collect the information we need to make the most accurate predictions possible.  Perhaps by expanding our knowledge we will be better equipped to formulate some solutions to the problems we have created in the seas such as  pollution (particularly plastics), climate change and overfishing.  These issues are drastically changing oceanic ecosystems which in turn affect the life on our planet.

The beautiful Pacific Ocean. Image: Universe Today
A new venture into deep ocean exploration. Image: ZD Net

One thing that sets science apart from other arenas is that is it based on verifiable evidence.  We are not talking about video footage of bigfoot or pictures of UFO’s here, we are talking about evidence that is easily confirmed by further examination or research.  I don’t think many people consider all of the expertise that goes into collecting this kind of scientific data–it’s not just scientists.

Not all evidence is verifiable.

Onboard the Oregon II there are engineers that make sure the ship and all its parts are functional, skilled fishermen that operate the cranes and trawling equipment, officers from the NOAA Corps that navigate and assist the captain in commanding the ship, cooks that feed a hungry crew and the scientists.  Conducting scientific research is a team effort that requires a variety of skilled personnel.

NOAA Corps member Ensign Brian Adornado with a nautical chart that's used for navigating our ships course.

Too often people underestimate the amount of time and labor that actually goes into collecting the information we have about our planet and its inhabitants.  In fact, many people dismiss scientific evidence as unimportant and trivial when in actuality it is based on the most technologically advanced methods that are available.  Scientific data, and conclusions derived from the data, are peer-reviewed (looked at by others in the field) before it is published or presented to the general public.

This is why it is so important to take heed to the reports about the changes taking place in the ocean’s waters. Without the data from NASA’s satellites in the sky,  NOAA’s ships on the sea and other sources too numerous to mention, we wouldn’t know the extent of the damage that’s being done to the ocean.

Chlorophyll concentrations in the ocean. Image: NASA satellite SeaWIFS

NOAA’s Teacher at Sea program has clearly demonstrated how good science is done.  I experienced first hand the importance of random sampling, scientific classification of organisms, repeating trials to ensure the accuracy of results, team work, safety, publishing data for the public to review and always having backup equipment.  I’m looking forward to sharing these experiences with my students.  Thank you NOAA!

Personal log:

My time aboard the Oregon II is coming to an end.  We have finished up our last stations and cleaned up the workrooms.  Now its back to Pascagoula, Mississippi.  It has been a wonderful experience!  For those of you that are wondering what I did each day on the ship it was pretty routine.

9:00 AM : Go to the galley for some juice and coffee.  Hot breakfast ends at 8:00 AM but they always have cereal and fresh fruit to eat.  In the galley there are two tables that each seat six people.  At the end of each table is a small TV so we can watch the news, our anything else that happens to be on DirectTV.

This is a picture of my room. I have the bottom bunk and my roommate sleeps on the top. The curtains are very nice for privacy since we work different shifts.
There is a bathroom (head) that my roommate and I share with our two neighbors. Each room has its own entry door to the bathroom.
This is the galley where all of our meals are served. It's also stocked with lots of yummy snacks and drinks!

9:30 AM:  After some coffee, juice and conversation I head upstairs to the lounge so I can check my e-mail and work on my blog.  The lounge has some comfortable seats, a big TV, lots of 8mm movies, two computers for the fishermen, and an internet cord for laptops.  Usually David, the ornithologist (bird scientist), is here working when I arrive so we usually chat for a while.

This is the lounge.

11:00 AM:  Lunch time!  everyday the chefs make amazing food for us to eat.  They’ve served bbq ribs, prime rib, turkey, quail, crab cakes, shrimp, mahi-mahi, ham, crab legs, pork loin, steaks and lots of other amazing side dishes and desserts.  Both chefs are retired from the Navy where they were also cooks.

12:00 noon: Head to the dry lab to start my shift.  At the start of every shift Brittany, our team leader, writes down all of the stations we will be going to as well as how many miles it takes to get there.

This is the "dry lab" where we spend our time waiting for the next trawl or plankton station. In this room there are computers dedicated to navigation, depth imagery and fisheries data.

5:00 PM:  Supper time!  Back to the galley for some more excellent food!

12:00 midnight:  Night crew comes in to relieve us from our 12 hour shift.  I quietly enter my room so I don’t wake up my roommate and hit the shower.  Then it’s to the rack (my bunk bed) with some ear plugs to block out the sounds of the engine.  The slow rocking of the waves makes a person fall asleep quickly after a long day at work.

Jacob Tanenbaum, October 15, 2008

NOAA Teacher at Sea
Jacob Tanenbaum
Onboard NOAA Ship Henry Bigelow
October 5 – 16, 2008

Mission: Survey
Geographic Region: Northeast U.S.
Date: October 15, 2008

Using the sextant
Using the sextant

Science Log

Our study of creatures on the bottom of the sea has been done every year for 45 years. In fact, it is the longest series of data for fish, in the world. Why is this important? I asked Dr. Michael Fogarty, head of the Ecosystems Assessment Program, at the Northeast Fisheries Sciences Center in Woods Hole, MA.

Mr. T: This is the longest uninterrupted time series of a trawl survey anywhere in the world. Is that important?

Dr. Fogarty: Really important because the changes that we are observing occur over long periods of time due to fishing and climate and other factors, so we need to track these changes to see how individual fish species are doing and to see how the ecosystem itself is responding to these changes.

Mr. T: What have you found?

Processing samples
Processing samples

We have found overall in the 45 years that we have been doing this survey, the number of fish has remained the same, but the types of fish have changed. In Georges bank, we would have mostly cod, flounder in the past, now we have small sharks, skates, which are relative of the rays.

Mr. T: What does that mean in terms of the ecosystem?

Dr. Fogarty: It has changed the entire food web because, for example, these small sharks we are seeing are ferocious predators. Because these dog-fish prey on other species, they keep the fish we usually like to eat down in number

Mr. T: Why is that happening?

Dr. Fogarty: Our hypotheseis is that because the some fish have been hurt by too much fishing, the other fish have come in to take their place.

IMG_7042-735252I thought about that for a while. It means this ecosystem has been effected by something called Overfishing and something called climate change. I started wondering about all the different factors that might have effected the environment we are studying. There are so many! Let’s look at some of the may things that human beings have done that have changed this ecosystem in the 45 years we have been doing this study. Dr. Fogarty and I talked about this and then we created talked about this mini website for you. Click each problem area to learn more.

Remember the other day when I tried to use a sextant to fix our position? I could not even get close, so today, I took a lesson with one of the NOAA Corps officers on board, Lieutenant Junior Grade Andrew Seaman. Click here to come along.

IMG_6866-762848Elsewhere on the ship, Snuggy and Zee paid a visit to the dive locker on the ship. This is the area on the ship where SCUBA gear is stored. We are not using SCUBA on this trip, but it was fun to visit the locker and see all the gear. Snuggy and Zee learned that the crew can actually fill up the air bottles they need right on the ship. They have all the equipment they need to do work underwater right here on the ship.

We had a fire drill yesterday. I know you are all familiar with fire drills, because we have them at school. When we do them at school, we often practice evacuating the building and calling the fire department. Well, at sea, things work a little differently. We have to get away from danger, but then, we have to practice putting out the fire as well. After all, there is no fire department to call way out here! Click here for a video.

Finally, so many of you asked about dangerous creatures that we have caught. This torpedo ray does have an electrical charge to it. The ray can zap you if you are not careful. I used rubber gloves to keep from getting hurt. The hardest part was holding the thing while we took the picture. I kept dropping it becuase it was so slimy!


AT: I have not been frightened by anything on the ship or in the sea that we have seen. The hag-fish did seem gross. Very gross. Other than that, no.

Hi SP, I enjoy Korean food very much and have eaten lots of crab roe. It does not gross me out at all. Thanks for writing.

NV, Zee and Snuggy are just fine. Thanks for asking.

Mrs. B’s Class: I’m glad you liked the blog. We found the dead whale 100 miles or so off of Cape Cod. There are no sea snakes here. The water is too cold. I’m kind of glad about that!

Hello Mrs. Graham’s Class. I am staying nice and warm. Even working on deck, it is not too cold. We could stay out for several more weeks without a problem. Do you know what we use to make electricity? See if you can figure that out. We have to go back to port before we run out of that.

Mrs. Christie Blick’s Class: Very interesting. Our chief Scientists says that they can tell the whales don’t like barnicles because whales without them don’t behave in quite the same way.
This particular fish, which we call a monk fish or a goose fish has all the adaptations you mentioned. You did very well thinking those up. The Chief Scientist, Phil Politis and I are both impressed. He says that the fish hides in the mud (that is why it is brown), which keeps it hidden from predators. It has another adaptation, the illicium which we are calling a fishing rod. This adaptation lures smaller fish to the monkfish. Since it does not move around as much as many other fish, it can stay safer from predators.

Hello to Mrs. Coughlin’s Class, Mrs. Berubi’s Class. I’m glad you like the blog.

NN, I’ll be back next week. Because the crew and I, as well as a few birds are the only land-creatures we have seen out this far! Thanks for writing.

Hi Jennnifer. Thanks for your kind words and thanks for checking in on the blog.

Tamil Maldonado, July 26, 2005

NOAA Teacher at Sea
Tamil Maldonado
Onboard NOAA Ship Fairweather
July 18 – 28, 2005

Mission: Hydrographic/FOCI Survey
Geographical Area: North Pacific
Date: July 26, 2005

Science and Technology Log

We are underway in the Gulf of Alaska, Southeast of Sitkinak Island.  This is our last day of doing FOCI survey. We used the Bongo Tow and CTD throughout day.

At 5:00 p.m. we were done with survey and transiting to Dutch Harbor, AK

At night I interviewed Chief Scientist, Janet Duffy-Anderson, one more time.  We talked about how to know fish ages and how fast they are growing.  It is because of their rings— the number of rings a larvae has will give the days they are alive.  Also, you can know their age by how far apart those rings are, which gives you the information of how fast they are growing.

Furthermore we talked about atmospheric changes and how this is affecting the ecosystem.  The target of FOCI is to get biological as well as physical data on the changes in the ocean and how those changes interact with the biota.  They wanted to do this research in Alaska because you can see changes more rapidly at the poles of the planet. We have seen phenomena like El Nino, La Nina and others increasing in frequency and duration. The rate between phenomena is increasing—they are happening  more frequently for the last decade.

I will be able to get fisheries raw data in time series done by FOCI and will continue doing some research back home in this area.

At night we did an acoustic hydrographic survey, and by changing depth target we got different data, all related. Changing the depth target changes how deep the beams go through the water and come back.  We worked with Hips & Sips Computer Software.  This program also corrects in real time the error estimates for each contributing sensor.  These entries are necessary for the computation of the Total Propagated Error.  The Vessel Configuration File (VCF) contains information about the different sensors installed on the survey vessel and their relationship to each other.  The information in the file is applied to logged, converted data files, and when the final sounding positions are calculated, the data is merged.  The entries in the VCF are time tagged and multiple time tags can be defined for each sensor.  This allows the user to update sensor information during the course of a survey.  This may occur if a piece of equipment has been moved.

In order to define the new fields in the VCF it is essential to understand standard deviation. The standard deviation is a statistic that explains how tightly various examples are clustered around the mean in a set of data.  When the data is tightly bunched together the bell-shaped curve is steep and the standard deviation is small.  When the data is spread apart, the bell curve is relatively flat indicating a larger standard deviation.

The vessel information will be displayed in the Vessel Editor.  The sensor positions are represented by colored dots. The VCF can be updated if a sensor changes position, and a unique time stamp ensures that the correct offsets are applied to data recorded at a certain time.  Each time the sensor information is changed, the drop down list above the 3-D vessel model will be updated to include the new time stamps.  The data grid below the 3D vessel contains all the offset information for the vessel.

Tomorrow… we will talk about the stability of the ship, and how its is done (so we do not sink!).

Kirk Beckendorf, July 15, 2004

NOAA Teacher at Sea
Kirk Beckendorf
Onboard NOAA Ship Ronald H. Brown

July 4 – 23, 2004

Mission: New England Air Quality Study (NEAQS)
Geographical Area:
Northwest Atlantic Ocean
July 15, 2004

Weather Data from the Bridge
Time 8:00 AM ET
Latitude- 45 53.18 N
Longitude- 70 36.48 W
Air Temperature 14 degrees C
Air Pressure 1000 Millibars
Wind Direction at surface Northeast
Wind Speed at surface 3 MPH

Daily Log

Yeah!!! The sun is trying to come out, the rains have stopped and the sea has calmed down. No I didn’t get sea sick, but it is hard to sleep when your bed is swaying back and forth and up and down. The winds have shifted and the scientists are hoping that the winds may be blowing some pollution our way. Seems like a strange thing to hope for, but of course they are here to study pollution and the wind has been blowing it away from us.

Why should anybody care if we add microscopic particles to the air?

Yesterday, I discussed one of the techniques used to study the microscopic particles that are in the atmosphere. But so what, why does anyone care about these tiny specks? Air pollution made by automobiles, power plants, factories and ships all contain both gases and particles. To be able to predict the changes resulting from air pollution, we have to learn all we can about the gases and the particles being released.

When the pollution is released into the atmosphere, the gases and particles start traveling with the air. (Just like pouring a quart of motor oil into a river.) Gradually the gases and particles spread out into the surrounding atmosphere. The gases can recombine and may start changing into other chemicals, but that’s another story I will get to soon.

The particles are not all the same. They come in different sizes and are made of a variety of chemicals. There are two main concerns about these little chunks floating along in the sea of gas; health hazards and climate change. If you take a breath, not only do you inhale the gas, but also all of the particles floating in the gas. Some of these particles may have a negative effect on a person’s health.

The main interest in the particles here on the BROWN is the effect they have on climate change. The Earth is of course warmed by the energy (light) coming from the sun. The more energy (light) the Earth gets and keeps, the warmer our temperatures. The less energy (light) the Earth gets and keeps, the cooler the temperatures. Pretty simple stuff? Not at all.

When sunlight shines down through the atmosphere and hits a particle the sunlight can either bounce off of the particle or be absorbed into the particle. If the light bounces back out of the atmosphere the Earth does not keep the light’s energy and there is a cooling effect. When light is absorbed into the particle, the energy (heat) will now be in the atmosphere and so there is a heating effect. Some particles absorb more light than others, so some have a cooling effect on the Earth’s atmosphere and others have a heating effect. One of the questions being asked is, overall do the particles cool the atmosphere or heat the atmosphere? This is not as simple of a question as it sounds, because there are also a lot of indirect effects that are not yet understood.

These microscopic chunks also affect clouds and cloud formation, but how much of an effect is not completely understood. The particles may cause clouds to be less likely to rain or at least, not rain as often. These microscopic particles in air pollution could have an effect on where and when it rains. So the scientists, here on the BROWN, are gathering data to help them try and understand the impact that particles will play in changing the Earth’s climate. Part of their task, is to determine where the particles are from, the numbers, sizes, and chemistry of the particles.

If I lost you in all of that, maybe it will help to put it all in a nutshell. These scientists are studying the type and number of particles in air pollution, to try and understand what effect these little chunks may be having on the Earth’s temperature and water cycle.

As Tim Bates said, we are trying to put together a large jigsaw puzzle and we don’t know what picture is on the puzzle. First we have to find all of the pieces. Then we have to put together the puzzle. We are now at the point that we think we have found most of the pieces and now we are trying to put them together. As you can see from the picture I sent in today there is some relaxation time, in the middle of all the data analysis.

Questions of the Day

The smaller particles are measured in nanometers how much of a meter is 1 nanometer?

If the wind is blowing 5 meters/second and we are 50 miles from Boston how long will it take Boston’s pollution to reach us?

Typical unpolluted air will have about 1000 particles in every cubic centimeter of air. What is something that has a volume of about 1 cubic centimeter?

Nancy Lewis, September 25, 2003

Nancy Lewis
Onboard NOAA Ship Ka’imimoana
September 15 – 27, 2003

Mission: Tropical Atmosphere Ocean (TAO)/TRITON
Geographical Area: Western Pacific
Date: September 25, 2003

Transit to Honolulu, HI:  Approximate arrival:  evening of 9/28//2003

1600-1700:  Fantail BBQ

1800:  Wog Talent Show

Weather Observation Log:  0100

Latitude:  12 degrees, 29.6’ N
Longitude:  145 degrees, 30.0’ W
Visibility:  12 nautical miles
Wind direction:  120 degrees
Wind speed:  9 knots
Sea wave height:  3-4 feet
Swell wave height:  5-7 feet
Sea water temperature:  28.0 degrees C
Sea level pressure:  1013.4 mb
Dry bulb pressure:  28.0 degrees C
Wet bulb pressure:  25.7 degrees C
Cloud cover:  6/8 Cumulus, cirrus

Science and Technology Log

Yesterday,  I asked the question:  “What is the difference between climate and weather?” Understanding the distinction is important, and is often confused by students, who often hear the two terms used interchangeably.

Very simply,  weather is what is happening at any given moment in terms of temperature, rainfall, winds, humidity and storms.  We all know that the weather can change from hour to hour and day to day.  Climate, on the other hand,  is the overall weather pattern and conditions for a given area or region over a period of time.  Thus,  we may say the climate for large areas of the continental U.S. is temperate, while the climate of Pacific islands is tropical.  The Big Island of Hawaii, with its two 13,000 foot mountains, has at least 9 climate zones.

We know that the earth has undergone times in its past of major climate change.  At one time, the polar ice extended down into areas of the United States that today are ice free. We know that even very small changes in ocean temperatures can create conditions that have far-reaching effects around the world.  Scientists are still attempting to understand the interaction of the atmosphere and oceans in order to be able to better predict and prepare for climate changes.  The climate observation system provided by the TAP/Triton array and maintained by the KA’IMIMOANA is an important link in the global effort to completely understand the complex relationships between air, sea, land, and human actions and how these affect climate and weather.

Personal Log

Today I spent a lot of time preparing for the Wog Talent Show, in addition to answering my email and writing this log.  I thought I would share with you part of my little act, which was a dramatization of the Legend of Fenua Enata, the creation myth of the Marquesas Islands. It was set to some very nice island music from the island of Rarotonga, in the Cook Islands.

The buoy that was dedicated to Taiohae School was painted and named by the students: “Fenua Enata,” which they told me was their word for their islands. The term “Marquesas” was the name given to the islands by the first European to come to Fenua Enata.

Legend of the Fenua Enata

A long time ago, when the sun was shining on the sea, the first man, Atea and the first woman, Atanua had no house.

So Atanua told Atea:  “We do not live well without a house”.  Atea did not answer.

He thought:  “I do not know how to build a house.”

Then he thought,  “I have the divine power of the Mana.  I will ask the gods.”

One evening Atea said to his wife Atanua: “Tonight I will build you a home.  I know how.”

It was dark and Atea’s voice was like a spell singing in the silent nothingness:



The spell was finished, the work began, the site was chosen in the middle of the ocean.

Two sturdy posts were erected:  these became UA POU

A long beam was placed on top of them;  it became HIVA OA

The front posts and the rafter covering the roof was NUKU HIVA

Nine woven coconut palm leaves, laid end to end as thatch became FATU IVA

The weaving of the thatch took a long time as did the making of the sennit.

Time passed quickly as Atea worked and worked without stopping.

Suddenly Atanua shouted:  “O Atea e,

The light of dawn is turning the sky to red”:  it is TAHUATA

“O Atea e, Moho, the morning bird just sang”: It is MOHOTANI

Atea kept digging a hole for the litter of fronds, sennit and hau bark,

Until finally he said:  “This is UA HUKU”.

Then the sun lit up the sky illuminating the ocean and the new dwelling place.

Atanua cried out:  “Ir is EIAO”.

Thus, the Land of Men, Fenua Enata, was created.


Question of the Day:  What is the thermocline?


Aloha from the KA,

Nancy Lewis