barracuda – Page 2 – NOAA Teacher at Sea Blog

August 18, 2011March 12, 2021

Jennifer Goldner: Sharks 101, August 18, 2011

NOAA Teacher at Sea
Jennifer Goldner
Aboard NOAA Ship Oregon II (NOAA Ship Tracker)
August 11 — August 24, 2011

Mission: Shark Longline Survey
Geographical Area: Southern Atlantic/Gulf of Mexico
Date: August 18, 2011

Weather Data from the Bridge
Latitude: 26.05 N
Longitude: 84.05 W
Wind Speed: 5.20 kts
Surface Water Temperature: 30.30 C
Air Temperature: 31.20 C
Relative Humidity: 67.00%

Science and Technology Log

Living in the landlocked state of Oklahoma, I am unfamiliar with sharks. Thus today, with the help of the scientists, I’m going to give some basics of sharks that I have learned this week. Class title: Shark 101. Welcome to class!

Let me start by telling you the various sharks and amount of each we have caught this week in the Gulf of Mexico. We have caught 7 nurse sharks, 2 bull sharks, 4 sandbar sharks, 73 Atlantic sharpnose sharks, 15 blacknose sharks, 5 blacktip sharks, 5 smooth dogfish, 2 silky sharks, and 4 tiger sharks. For those of you that took the poll, as you can see the correct answer for the type of shark we have caught the most of is the Atlantic sharpnose shark. The sharks ranged in size from about 2 kilograms (Atlantic sharpnose shark) to 100 kilograms (tiger shark). Keep in mind a kilogram is 2.24 pounds.

In addition to the sharks caught we have also caught yellowedge, red, and snowy grouper, blueline tilefish, spinycheek scorpionfish, sea stars, and a barracuda.

From the last post you now know that we soak 100 hooks at a time. Throughout the survey we have had as little as no sharks on the line in one location and up to 25 on the line in other locations.

Me holding a spinycheek scorpion fish — Me holding a spinycheek scorpionfish

When a shark is brought on board, it is measured for total length, as well as fork length (where the caudal fin separates into the upper and lower lobes). The sex of the shark is also recorded. A male shark has claspers, whereas a female shark does not. The shark’s weight is recorded. Then the shark is tagged. Lastly, the shark is injected with OTC (Oxytetracycline) which can then be used to validate the shark’s age. It should be noted that for larger sharks these measurements are done in the cradle. For perspective, I had Mike, fisherman, lay in the cradle to show the size of it. Also on this trip, some of the scientists tried out a new laser device. It shoots a 10 cm beam on the shark. This is then used as a guide to let them know the total length. Thus, the shark can actually be measured in the water by using this technique.

Mike, Fisherman, in the shark cradle- It is approximately 8 feet long. — Mike, Fisherman, in the shark cradle — It is approximately 8 feet long.

Mark Grace, Chief Scientist, weighs a shark

Male shark on the left (with claspers), female shark on the right (no claspers)

Mark Grace, Chief Scientist, and Adam, Scientist, measure a nurse shark in the cradle

Mark Grace, Chief Scientist, assists me tagging an Atlantic sharpnose shark

Tim, Lead Fisherman, holds the bull shark while I tag it!

Giving antibiotics to an Atlantic sharpnose shark — Injecting OTC into an Atlantic sharpnose shark

Here are some things I learned about each of the sharks we caught.

1. Nurse shark: The dorsal fins are equal size. They suck their food in and crush it. Nurse sharks are very feisty. See the attached video of Tim, Lead Fisherman and Trey, Scientist, holding a nurse shark while measurements are being taken.

The skin of nurse sharks is rough to touch. Incidentally, all types of sharks’ skin is covered in dermal denticles (modified scales) which is what gives them that rough sandpaper type feeling. If you rub your hand across the shark one way it will feel smooth, but the opposite way will feel coarse.

Dermal denticles, courtesy of Google images

Cliff, Fisherman, getting a nurse shark set to measure

2. Bull shark– These are one of the most aggressive sharks. They have a high tolerance for low salinity.

Bianca, Scientist, taking a blood sample from a bull shark

3. Sandbar shark– These sharks are the most sought after species in the shark industry due to the large dorsal and pectoral fins. The fins have large ceratotrichia that are among the most favored in the shark fin market.

4. Atlantic sharpnose shark– The main identifying characteristic of this shark is white spots.

5. Blacknose shark– Like the name portrays, this shark has black on its nose. These sharks are called “baby lemons” in commercial fish industry because they can have a yellow hue to them.

6. Blacktip shark- An interesting fact about this shark is that even though it is named “blacktip,” it does not have a black tip on the anal fin. The spinner shark, however, does have a black tip on its anal fin.

Jeff and Cliff getting a blacktip shark on board

7. Smooth dogfish– Their teeth are flat because their diet consists of crustaceans, such as crabs and shrimp.

Travis, Scientist, weighing a smooth dogfish

8. Tiger shark– Their teeth work like a can opener. They are known for their stripes.

A large tiger shark got tangled in our line. Notice the 2-3 foot sharpnose shark. The tiger shark is about 5 times larger! — A large tiger shark got tangled in our line. Notice the 2-3 foot sharpnose shark at the left. The tiger shark is about 5 times larger!

Daniel, Scientist, holding a tiger shark

9. Silky shark- Their skin is very smooth like silk.

Daniel, Scientist, holding a silky shark

Another thing I got to see was shark pups because one of the scientists on board, Bianca Prohaska, is studying the reproductive physiology of sharks, skates, and rays. According to Bianca, there are 3 general modes of reproduction:

1. oviparous– Lays egg cases with a yolk (not live birth). This includes some sharks and all skates.

2. aplacental viviparous – Develops internally with only the yolk. This includes rays and some sharks. Rays also have a milky substance in addition to the yolk. Some sharks are also oophagous, such as the salmon shark which is when the female provides unfertilized eggs to her growing pups for extra nutrition. Other sharks, such as the sand tiger, have interuterine cannibalism (the pups eat each other until only 1 is left).

3. placental viviparous– Develop internally initially with a small amount of yolk, then get a placental attachment. This includes some sharks.

Yet another thing that scientists look at is the content of the shark’s stomach. They do this to study the diet of the sharks.

Example of oviparous- Skate egg case, Courtesy of Google images

Placental viviparous — Example of placental viviparous

Example of aplacental viviparous- Dogfish embryo, courtesy of Google images

Contents from the stomach of a smooth dogfish (flounder and squid)

Personal Log

Anyone who knows me realizes that I appreciate good food when I eat it. Okay, on NOAA Ship Oregon II, I have not found just good food, I have found GREAT cuisine! I am quite sure I have gained a few pounds, courtesy of our wonderful chefs, Walter and Paul. They have spoiled us all week with shrimp, steak, prime rib, grilled chicken, homemade cinnamon rolls, turkey, dressing, mashed potatoes, and gravy, and the list goes on! Just talking about it makes me hungry!

Walter is a Chef de Cuisine. I want to share with you two of the wonderful things, and there are many more, he has prepared for us this week. The first is called ceviche. On our shift we caught some grouper. Walter used these fish to make this wonderful dish.

In addition to the grouper, the ingredients he used were lemon juice, vinegar, onions, jalapeno, kosher salt, and pepper. He mixed all the ingredients together. The citric acid cooks the raw fish. It has to be fresh fish in order to make it. Instead of lemon juice, apple juice or orange juice can be substituted. All I know is that since I arrived on NOAA Ship Oregon II, I heard from the entire crew about how great Walter’s ceviche was and it did not disappoint!

Walter, Chef de Cuisine, with his award winning ceviche

Walter's maccaroons — Walter’s macaroons

Another thing Walter is famous for on board NOAA Ship Oregon II are his macaroons. These are NOT like ANY macaroons you have ever tasted. These truly melt in your mouth. Amazingly, he only has 4 ingredients in them: egg whites, powdered sugar, almond paste, and coconut flakes. They are divine!!

On another note, I would like to give a shout out to my 5th grade students in Jay Upper Elementary School! (I actually have not had the chance to meet them yet because I am here as a NOAA Teacher at Sea. I would like to thank my former student, Samantha Morrison, who is substituting for me. She is doing an outstanding job!!)

Jay 5th Grade: I cannot wait to meet you! Thank you for your questions! We will have lots of discussions when I return about life at sea. Several of you asked if I have been seasick. Fortunately, I have not. Also, you asked if I got to scuba dive. Only the dive crew can scuba dive. We are not allowed to have a swim call (go swimming) either. As you can see, there is plenty to do on board! Also, you may have noticed that I tried to include some pictures of me tagging some sharks. Lastly, this dolphin picture was requested by you, too. Dolphins LOVE to play in the ship’s wake so we see them every day.

Enjoy the view!

I LOVE the scenery out here! I thought I’d share some of it with you today.

I thought these clouds looked like dragons. What do they look like to you?

The vertical development of clouds out here is amazing!

Sunset in the Gulf of Mexico aboard NOAA Ship Oregon II

August 10, 2010April 22, 2021

Annmarie Babicki, August 10, 2010

Time:NOAA Teacher at Sea: Annmarie Babicki

NOAA Ship Name: Oregon II

Mission: Shark and Red Snapper Bottom Longlining

Geographical area of cruise: Gulf of Mexico

Date: August 10, 2010

Weather Data

Latitude: 25.36 degrees North

Longitude: 82.56 degrees West

Clouds: Overcast and occasional showers

Winds: 11.5 kts

Temperature: 28.6 Celcius or about 84 degrees Fahrenheit

Barometric Pressure; 1010.04

Science and Technology:

I am working here in the Gulf of Mexico with a scientist who is completing shark stock assessments. It is a long term study, which monitors population trends of all shark species in the Gulf. The data collected from this survey is used in conjunction with data from many other studies to determine fisheries policy. One example of this could be the determinations of how large a catch can be and how long the catch season can be. Policies are not only different by species, but also by whether the catch is for recreational or commercial use.

Today we began the shark survey and completed locations off the coast of Florida. The locations are chosen at random, so that the data is objective and the findings are not skewed. During each sampling the following information is recorded: shark species, its length, weight, sex, and the stage of its maturity. The coordinates for each survey are also recorded, which enables scientists to know where particular shark populations exist. The number of stations completed per day varies depending on how far the stations are from one another. Generally, the amount of time it takes to complete it is approximately two hours.

DSCF0124 — Hi-flyer being dropped in the water

The methodology used to collect data on sharks is called bottom longlining. This is when each hook are baited with mackerel and put on a gangion. We cut our own bait and attach it to the hooks. Each hook is assigned a number, one to one hundred, so that it can be tracked. That line is then systematically hooked onto another line that runs one nautical mile. Both ends of the line have what are called hi-flyers that float vertically in the water. They are bright orange and have a blinking light on the top, so that they can be seen from a distance. There is a weight placed on both ends of the line and one in the middle. The weights help to keep the baited lines well below the surface. After the last gangion is put on, we wait one hour and then begin to pull in all hundred lines. During this entire process the ship is moving, which can be sometimes challenging, especially in bad weather.

DSCF0153 — Measuring the length of a barracuda

Although the focus of this survey is sharks, data is collected on all fishes that are captured. After the fish are pulled up on deck, data is collected and recorded by the hook number. The handling of sharks is different from the handling of fish. Only sharks are fitted with a tag, which does not hurt them. There are two types of tags, but to date we have only used one type. In order to attach the yellow tag, a small slit is made underneath the dorsal fin. The tag has a sharp point on one end, which is inserted into the slit. Also a small sample (5-10 cm) of the shark’s pelvic fin is taken. This is then taken to the lab where DNA testing is done. The DNA can be used to verify known species and unknown or new species. Also, scientists can compare the population of sharks in other oceans around the globe by their DNA. What I have observed on every catch is that the scientist carefully monitors the shark to ensure it is not being stressed or could be hurt in any way.
Today we caught this beautiful and powerful scalloped hammerhead shark. When very large sharks like the hammerhead are caught, they are not pulled up by the line because it can damage them and they are too heavy to handle. Instead they are guided onto a cradle which sits in the water. Once on securely they are hoisted to the side of the ship where scientists can collect the needed data. The hammerhead weighed in at 341lb. and was 8 feet long. What a catch this was, everyone was very excited.

DSCF0138 — The cradle used to raise sharks in and out of the water.

Personal Log

The day started out cloudy but eventually turned over to showers and then to a hard rain. We are feeling the effects of the tropical depression, which explains why it is difficult for me to stay standing for any length of time. I am hitting and seeing more walls than I care to! Also, it is a very bizarre feeling when the chair you are sitting in moves from one side of the room to the other. Luckily I have fended of sea sickness, but I did have a mild case of nausea, however, nothing that stopped me from continuing to work on deck. Thank goodness for Bonine.
Sleeping has not been much of a problem for me except when the ship’s engine changes. The engines make a deep loud growling sound that wakes me for just a few minutes. Being out in the fresh air does make me tired, so I have to set my alarm clock or I will sleep through my next shift. It’s hard to know what day it is because I am working a noon to midnight shift. You keep track of time by when the next sampling is due.

Being at sea and doing this type of research is definitely only for the hearty. The weather changes often as does the pace of the work. There are many jobs to do during sampling and I am trying to learn all of them. Baiting a hook and taking off bait has been frustrating, particularly since it has to be done quickly. The type of hook they use has a barb on it that goes in a different direction from the rest of the hook, so it doesn’t just slide out. We wear special gloves to protect our hands from the hooks and skin of the sharks, which can feel like sand paper or razor blades depending on the shark. They say that practice makes perfect. Well, I have a lot of practicing to do!
My next adventure is to learn how to hold sharks and not be afraid of them. I’ll keep you posted.

“Answer to Question of the Day” The fin clip is an actual piece of a fin that has been cut off the shark to be used for DNA testing.”Question of the Day” What is a wet and dry room on a research vessel?

“Animals Seen Today” red groupers, tiger sharks, sandbar sharks, scalloped hammerhead, sharpnose shark, and sea birds

July 11, 2010April 22, 2021

Anne Marie Wotkyns, July 10-11, 2010

NOAA Teacher at Sea
Anne Marie Wotkyns
Onboard NOAA Ship Pisces
July 7 – 13, 2010

NOAA Teacher at Sea: Anne Marie Wotkyns
NOAA Ship Pisces
Mission: Reef Fish Survey
Geographic Area: Gulf of Mexico
Date: Saturday July 10, Sunday, July 11, 2010
Latitude: Saturday 27⁰54.8057 N Sunday 27⁰51.098 N
Longitude: Saturday 093⁰18.2990 W Sunday 093⁰04.100 W

Weather Data from the Bridge

Air Temperature: Saturday 30.3⁰C Sunday 30.4⁰C
Water Temperature: Saturday 30.5⁰C Sunday 30.35⁰C
Wind: Saturday 2.55 knots Sunday 1 knot
Other Weather Features:
Saturday 62% humidity, cloud cover 20% Sunday 67% humidity, cloud cover 35%
Saturday Swell Height .2 meter Sunday .4 meter
Saturday Wave Height .05 meter Sunday .25meter

Science and Technology Log

There are several types of sensing equipment we have been using on this cruise. Each time we drop the camera array at a site attached to the array is a little device called a Temperature Depth Recorder or a TDR. As the camera array sinks to the bottom, the TDR records the temperature and depth. When the camera array is brought back on board the ship one of the scientists, or one of us teachers, unclips it and brings it into the lab. To get the information off you hit it once with a magnet that communicates with the chip inside telling it you want to download the information. Then you place a stylus on the device and it downloads the information to the computer. The data is saved under the name of the site and then the information is entered into a spreadsheet that converts the information from the psi(pounds per square inch) to meters of depth. To clear the TDR you hit it four times with the magnet and when it flashes red it is clear! Liz and I learned to do this the first day we did stations and we usually took turns entering the information. This was done 8 times on Saturday and 7 times on Sunday.

At every station, a CTD is also dropped into the water. A CTD (Conductivity Temperature Recorder) gives a hydrographic profile of the water column. The CTD is attached to the bottom of a rosette or carousel that also contains water sampling bottles. Attached to the rosette is a conductive wire that sends information to the lab. Mike, the survey technician, comes into the lab after every camera array is dropped and runs the CTD process. The CTD is placed in the water and allowed to acclimate for 3 minutes before they begin taking readings. The CTD is dropped to the bottom of the seafloor and then raised again. Mike monitors this from the dry lab. Once a week he uses the water bottles to take water samples. To take a sample he uses a remote from inside the dry lab to trigger the bottles at a given depth to close them. The CTD can also be programmed to close different bottles at different depths. It was very interesting to watch the EK60 echo sounder screen as the CTD lowered and raised.

Each morning, Chief Scientist Kevin goes through the video footage from the previous day. For each site he identifies what the bottom substrate was (“sandy flat bottom”, “coralline algal bottom”, “malacanthus mounds,” etc) and then he identifies briefly any fish that he sees. When he is doing this, he will call us over and explain how he can tell what the species is or what behavior a fish is exhibiting.

Saturday, we dropped the camera array at 8 different stations on Bright Bank sites. The two chevron fish traps brought up NO FISH! On the bandit reel we caught one fish. It was a sand tile fish, Malacanthus pulmieri, a “banana shaped” bottom dweller that lives in large rock-covered mounds. Wearing rubber gloves, I weighed and measured him quickly and then we threw him back alive. He was 494 mm (49.4 cm) long and weighed .550 kg. I’m not very comfortable touching the fish or the bait we’ve been using, so I was quite proud of myself!

That was the only fish we caught all day! Today was a little frustrating. It even got Kevin a little down!

Sunday brought our last day of work on the reef survey. The Pisces was on the north half of Geyer Bank, still off the coast of Louisiana. I was determined to fully participate in all aspects of the science, so I bravely donned my gloves and baited the bandit reel’s 10 hooks with chunks of mackerel. We were positive we would catch more fish today!

The camera cage came up with some interesting “hitchhikers” aboard. One was a round sponge, about the size of a softball. At first we thought it was a rock, but when I grabbed it, it was soft and squishy. Sponges are filter feeders which draw in water through many small , incurrent pores. Food and oxygen are filtered out and then exit through one or more larger excurrent openings.

In the fish lab, Kevin found a large cymothoid isopod, a crustacean that attaches to fish using its hook-like legs and scavenges food as the fish feeds. It reminded me of a cockroach more than a “rolly-polly”, the land isopod found in our gardens.

The day continued with seven camera drops, the bandit reel deployment, and two chevron fish traps. Despite positive thinking and Liz doing her “fish dance,” both fish traps came up empty. So the 2nd bandit reel was our last chance for fish. We were excited to see the “fishing pole” part of the reel bouncing up and down. It was reeled in and here’s what we caught!

It was a great barracuda, Sphyraena barracuda, 939 mm (93.9 cm) long and weighing 3.49 kg. Joey measured and weighed it, carefully avoiding its sharp teeth. He released the large predator and our last catch quickly swam away.

An interesting souvenir I will be taking home are some fish otoliths. Otoliths are fish earbones. Bony fish lay down layers of bone on their otoliths as they age, similar to the rings on a tree. Scientists use the otoliths to determine the age of a fish. Kevin collected the otoliths from a yellowedge grouper one of the crew caught and gave one each to Liz and I. Then he helped me remove the otoliths from a red porgy – quite a messy procedure, but very rewarding to cut open the skull and see the earbones!

In tomorrow’s log, I’ll share what we learned on our tour of the engine room, and about the different job opportunities on the ship.

Personal Log

Two nights ago, the ship’s captain (Commanding Officer Jerry Adams) had invited Liz and I up to the bridge to help “steer” the ship. He explained that we were driving a 52 million dollar vessel with 30 lives on board, so we were feeling pretty nervous! The Pisces was moving to the next day’s work area so the bridge crew would be driving all night. I got to steer first, my hands tightly gripping the wheel Captain Jerry and Ensign Kelly Schill explained how to drive and the proper language to use. When steering, you are following a set course using a gyroscopic compass as well as a digital heading read out. You are steering the rudder by degrees. The heading is stated in single digits so 173 would be one seven three.

We were sailing at night, so all the bridge lights were kept turned off to better see the lights of other boats and oil rigs. The bridge crew even had red flashlights so they wouldn’t ruin their night vision. Liz and I both got a chance to steer the ship in circles. I even did a Williamson turn, which is done when there is a man overboard. You turn 60⁰ in one direction and then turn the other direction so you are back on your reciprocal course to pick up the person who is overboard. While I was doing this, the ETA (estimated time of arrival to our next destination) display changed from “ 6:10 am” to “NEVER.” We both laughed pretty hard about that!

The Dynamic Positioning system (similar to an automatic pilot system) is called Betty. She can talk to the crew on the bridge and is reportedly extremely polite. I find is amazing how the ship can maintain such a steady course, with the computers adjusting for the constant changes in current, wind, and other factors which affect the ship’s steering. The DP also keeps the Pisces in one place when we are at a science station. The Captain promised to show us more about the DP on our next bridge visit. Everything on the bridge is electronic. You can click a button and see how much fresh water is on board, how much fuel, which engines are working and even wake someone up! The technology is truly amazing. I keep thinking about my grandfather who sailed in the Swedish Merchant Marines in the 1930’s. What would he have thought all this?

Where has Pascy the penguin been in the last 2 days? Check out his pictures!

Pascy helps me write my log entry out on the back deck at sunset!

Safety is very important! Pascy wears his hardhat whenever he works out on the deck with equipment.

On the lookout for other ships and oil rigs!

Pascy helps with the Pisces’ navigation. He’s double checking the computer’s course.

Pascy in the captain’s chair on the bridge.

Pascy at the helm of this $52 million dollar ship!

July 11, 2010April 22, 2021

Elizabeth Warren, July 11-12, 2010

NOAA Teacher At Sea: Elizabeth Warren
Aboard NOAA Ship Pisces

Mission: Reef Fish Surveys
Geographical Area of Cruise: Gulf of Mexico
Date: July 11-12, 2010

Winding down

NOAA SHIP: Pisces
Mission: Reef Fish Survey
Geographical area of cruise: Gulf of Mexico
Date: Sunday, July 11th- Monday July 12th, 2010

Weather Data from the Bridge:
Temperature: Water: 30.4 ℃ (which is 86.9℉ ) Air: 30.5 ℃
Wind: 1 knots
Swell: .2 meters
Location: 27. 51° N, 93.04° W
Weather: Sunny, Humidity 67%, 35% cloud cover

Science/Technology Log:
On Sunday, Anne-Marie and I were given a tour of the Engineering spaces. The Pisces has an integrated diesel electric drive system. There are two propulsion motors on the shaft that generate 1,500 horsepower each that are electric. Chief Engineer Garret explained that it is similar to a little remote control toy boat, except of course that the Pisces is much bigger. The Pisces is 208.6 feet long, 50 feet wide (breadth), and the Captain standing in the bridge is 37 feet above the water.

There are 4 generators on board, two 16 cylinder and two 14 cylinder that runs what the Chief Engineer called the “hotel load”, keeping the lights on. Another really cool thing about the Pisces is that it was designed to be a quiet vessel because underwater noise can influence how fish behave and can limit what the scientists are able to on board, not to mention that a noisy ship is harder to sleep on. The International Council for Exploration of the Seas (ICES) established standards to improve the noise onboard research vessels and the Pisces was designed to meet those standards.

Throughout the engineering room there are giant electrical boards that are constantly kept cool by the air conditioning that is constantly running on the ship. The interesting thing about the air conditioning is that the engineering deck and the labs are kept cool using regular air conditioning methods but the staterooms and other decks are kept cool using cold water! This is also the method used to keep the two propulsion motors cool as well!

When we entered into the belly of the ship we were given earplugs because it gets loud and really hot down in the very bottom. Garret showed us that if the bridge ever lost power that there is a secondary way to steer. The crew steers using a hydraulic steering system rather than the electrical one on the bridge. The crew uses a sound powered telephone to communicate with the bridge during any power outages (or drills).

Garret showing the hydraulic steering system

One very important piece of the engineering deck is the Freshwater system. The ship pulls in sea water and uses heat from the engine to make freshwater through distillation. They heat the sea water and catch the evaporation which is fresh water. There are two distillers on board and they can make 1,850 gallons a day.

When we were down there we witnessed Junior Engineer Steve repairing the blown diaphragm that had interfered with the system. When we are in the area that NOAA has labeled as a 95% uncertainty trajectory regarding the presence of oil, we do not take in water as it could be contaminated and damage the system. This is why the first two days and the last two of the cruise we were asked to conserve water.

Personal Log:

The tour was very exciting! We began in the galley where Garret made Anne Marie and I lattes. They were beautiful! When we went into the loud part of the deck we put on ear plugs from the ear plug dispensing unit, which I had to take a picture of. Once again I was impressed with how patient the crew can be with us, although I do think we are a source of amusement for many of them.

When the tour ended Captain Jerry took us to the very bowels of the ship and showed us the transducer well, this is the part of the ship that keeps the water out and keeps us from sinking.

Sunday was the last day of this leg of the survey. I did the banana song today in hopes that we would find something in the fish traps, unfortunately it did not work! As the day went on I was able to help more and more. I helped throw in the chevron fish trap, baited the bandit reel, pulled the rope to let the camera array drop. On the last bandit reel though we finally got some action! We were all pretty excited even Watch-leader Joey!

When the reel came up we discovered that we had caught a barracuda on the line! He was huge! We (okay so it was Joey) rushed through all of the measuring so we could throw him back in quickly! We still had a chance to get some pictures of him though. There is a limited amount of time to get all of the camera arrays into the water during a day and we were getting pretty close to running out of time so Captain Jerry and Kevin decided to do a camera array on the “fly”. We had to be ready! As we approached the site we got the camera over the side and as soon as the signal was given we dropped it.

As I said before we have a lot of down time in between drops. I broke out my I-pod touch and we played a bunch of games. For awhile we played Would you rather? My favorite question was: Would you rather be saved by superman or meet Winnie the Pooh? Can you guess which one I picked? Then I introduced Joey to Madlibs. I couldn’t believe he had never played. Finally, Joey and I started a battle with the Bubble Wrap game. The idea is to pop as many of the bubbles as you can within 45 seconds. It got very heated! Right now the record is 254 and I’m sad to say that Joey is the record holder. I still have some time though… it could happen.

It’s a good thing Anne Marie and I had gotten a tour on Sunday because today, Monday, there was a Steering drill. We knew exactly what was going on. The Captain announced the drill and then at the end said the Teachers At Sea should head down so we could drive. The experience is completely different. You are down in the depths of the ship and there is a crew member using headphones to talk to the bridge. Instead of a steering wheel, there are two things with bubbles at the top that you push down to change the angle of the rudder. Each of the bubbles steers the ship either left or right. I have to say we did a fantastic job, especially with all of the help!

Something to think about: For me this has been an adventure, but a lot of the people that I’ve met do this all year round. They live and work on ships 264 days a year. When they get off of work at the end of the day, they can’t really go anywhere. A lot of the time they share a room for three weeks with someone they’ve never met before. There are movies, satellite tv, internet, places to work out, and time to fish. Imagine being “lovingly incarcerated” as a class, all 32 of us on a ship for weeks on end? That would be an interesting change. What I have noticed is that everyone seems to love what they do and most have traveled all over the world with various nautical employments (Navy, Exxon, NOAA).

As an outsider, on board for a short amount of time I’m still counting my time here as a once in a lifetime, educational adventure! Although, I wouldn’t mind staying.

Yesterday, I left out some rubber ducks for the crew to sign for me! Here they are with Anne Marie’s friend Pascy!

September 18, 2009April 2, 2021

Clare Wagstaff, September 18, 2009

NOAA Teacher at Sea
Clare Wagstaff
Onboard NOAA Ship Nancy Foster
September 11 – 18, 2009

Mission: Florida Keys coral reef disease and condition survey
Geographical Area: Florida Keys – Key West
Date: Saturday, September 18, 2009

Contact Information
Clare Wagstaff Sixth and Eighth Grade Science Teacher Elmwood Franklin School 104 New Amsterdam Ave Buffalo, NY 14216
cwagstaff@elmwoodfranklin.org

Weather Data from the Bridge (information taken at 12 noon)
Weather: Sunny Visibility (nautical miles): 10
Wind Speed (knots): 0 (in port)
Wave Height (feet): <1
Sea Water Temp (⁰C): 30.4
Air Temp (⁰C): 32

Science and Technology Log

Right: Black-band Disease on Montastraea annularis. Photo courtesy of Mike Henley — Black-band Disease on Montastraea annularis. Photo courtesy of Mike Henley

With the last dive of the cruise over, the group has completed 175 dives, which equates to 7.5 days underwater! Most of the planned coral reef sites have been surveyed even with our lack of a third small boat. The weather has stayed relatively calm and has been surprisingly supportive of our cruise. The mad rush is now to input all the remaining data before we disembark the ship later today.

An area that I have only briefly referred to in previous logs, are the types of coral diseases present and being studied. Chief Scientist, Scott Donahue, commented to me that there has been a trend over the last decade of decreasing coral coverage. This is believed to be related to anthropogenic stresses such as water quality and climate change. By comparing spatial and temporal patterns against trends in coral reef disease, over different geographic regions and reef types, it is hoped that a greater understanding of how these patterns are related to different environmental conditions. The team was specifically looking at ten disease conditions affecting 16 species of Scleractinian corals and Gorgonian sea fans. Although I tried to identify some of the diseases, it was actually quite difficult to distinguish between individual diseases and also other causes of coral mortality.

White-band Disease on Acropora cervicornis. Photo courtesy of Mike Henley

Black-band Disease is a crescent shaped or circular band of blackish material that separates living material from white exposed skeleton. It is caused by a cyanobacteria in combination with a sulfide oxidizing bacteria and a sulfur reducing bacteria. White-band Disease displays a margin of white tissue decay. It can start at the base of a colony or in the middle. It affects branching corals and its cause is currently unknown. Corals have a pretty tough time living out in the ocean and have many problems to overcome. If its not a boat’s anchor crushing it could be any number of the following; a parrot fish (predator) eating it; deterioration of the water quality; a hurricane; an increase in major competitors like algae or tunicates, and to nicely top it all, it can always get a disease too!

Most of the scientists on the Nancy Foster are volunteers, giving up their own free time to be part of the trip. Kathy Morrow is a Ph.D. student who has extensively studied the ecology of cnidarians for the past 9 years. She is currently researching her dissertation on the community structure and stability of coral-algal-microbial associations based on studies conducted off the coast of Summerland Key, Florida and St. Thomas, U.S. Virgin Islands. On one of the last dives of the trip Kathy takes time to collect mucus samples (she refers to this fondly as coral “snot”), from a site she has previously visited numerous times over the last few years. The objective is to collect mucus samples so that they can be studied later for their bacteria composition.

Morrow collecting coral mucus. Photo courtesy of Mike Henley.

Once Kathy has collected these samples she must process them so that they can be stored until she has the opportunity back in the lab, to analyze them. Although I was not present when Kathy was collecting the samples, I did help her in the wet lab with the final stages of storing her collection of samples. Having collected multiple mucus samples from each of the preselected coral species in syringes, the samples were then placed into a centrifuge to extract the bacteria present. This material is denser, so sinks to the bottom ad forms a darker colored pellet. My job is then to remove the excess liquid, but preserve the bacteria pellet so that it can be frozen and stored for later analysis. Back in the lab at Auburn University, Kathy will chemically breakdown the bacteria to release their DNA. This DNA is then replicated and amplified allowing for Kathy to perform analysis on the bacteria to identify the types present in the corals. Kathy will spend the next year studying these bacteria samples and many more she has collected.

Personal Log

Here I am helping Kathy Morrow preserving coral mucus specimens. Photo courtesy of Cory Walter

So here we are back in port after an amazing time on the Nancy Foster. I was initially concerned about being out at sea with people I did not know, studying an area of science I really knew very little about, in an environment I knew would probably make me sick, but didn’t thank goodness! But everything turned out to be a thousand times better than I could have imagined. I have had seen so much and learnt an amazing amount that my head is spinning with all the ideas I have to use with my classes back at school. Yet, there are things that I just rang out of time to look more closely at and part of me wishes we had been out at sea longer. My second time as a Teacher At Sea, has left me with some wonderful memories of the most professional and dedicated scientists and crew you could wish for, but also of how amazing corals are and how much we still have to learn. Thank you everyone who was involved in making this a truly remarkable and memorable experience.

The 2009 coral research team and Teacher At Sea, Clare Wagstaff on board the Nancy — The 2009 coral research team and Teacher At Sea, Clare Wagstaff on board the *Nancy Foster*