Cristina Veresan, Lights, Camera, Ocean! August 13, 2015

NOAA Teacher at Sea
Cristina Veresan
Aboard NOAA Ship Oscar Dyson
July 28 – August 16, 2015 

Mission: Walleye Pollock Acoustic-Trawl survey
Geographical area of cruise: Gulf of Alaska
Date: Wednesday, August 13, 2015

Data from the Bridge:
Latitude: 59° 18.31’N
Longitude: 141° 36.22’W
Sky: Overcast
Visibility: 10 miles
Wind Direction: 358
Wind speed: 8 knots
Sea Wave Height: < 1 feet
Swell Wave: 2-3 feet
Sea Water Temperature: 16.2°C
Dry Temperature: 15°C

Science and Technology Log

When my shift begins at 4am, I often get to participate in a few “camera drops” before the sun comes up and we begin sailing our transect lines looking for fish. We are conducting the “camera drops” on a grid of 5 km squares provided by the Alaska Fisheries Science Center bottom trawl survey that shows whether the seafloor across the Gulf of Alaska is “trawlable” or “untrawlable” based on several criteria to that survey. The DropCam footage, used in conjunction with a multi-beam echosounder, helps verify the “trawlability” designation and also helps identify and measure fish seen with the echosounder.

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The Drop Camera being deployed

The DropCam is made up of strobe lights and two cameras, one color and one black and white, contained in a steel frame. The cameras shoot in stereo, calibrated so scientists can get measurements from rocks, fish, and anything else on the images. When the ship is stopped, the DropCam can be deployed on a hydrowire by the deck crew and Survey Tech. In the Chem Lab, the wire can be moved up and down by a joystick connected to a winch on deck while the DropCam images are being viewed on a computer monitor. The ship drifts with  the current so the camera moves over the seafloor at about a knot, but you still have to “drive” with the joystick to move it up and down, keeping close to the bottom while avoiding obstacles. The bottom time is 15 minutes for each drop. It’s fun to watch the footage in real-time, and often we see really cool creatures as we explore the ocean floor! The images from the DropCam are later analyzed to identify and length fish species, count number of individual fish, and classify substrate type.

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Emily “drives” the camera from the Chem Lab as the sun begins to rise
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DropCam images (clockwise from top left) a skate, brittle stars, a cruising halibut, two rockfish in rocky habitat

Technology enables scientists to collect physical oceanographic data as well. The Expendable Bathythermograph (XBT) is a probe that is dropped from a ship and measures the temperature as it falls through the water column. The depth is calculated by a known fall rate. A very thin copper wire transmits the data to the ship where it is recorded in real-time for later analysis. You launch the probe from a hand-held plastic launcher tube; after pulling out the pin, the probe slides out the tube. We also use a Conductivity Temperature Depth (CTD) aboard the Oscar Dyson; a CTD is an electronic device used by oceanographers to measure salinity through conductivity, as well as temperature and pressure. The CTD’s sensors are mounted on a steel frame and can also include sensors for oxygen, fluorescence and collecting bottles for water samples. However, to deploy a CTD, the ship must be stopped and the heavy CTD carousel lowered on a hydrowire. The hand-held XBT does not require the ship to slow down or otherwise interfere with normal operations. We launch XBT’s twice a day on our survey to monitor water temperatures for use with the multi beam echosounder.

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Cristina launching the XBT probe Photo by Alyssa Pourmonir
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Survey Tech Alyssa servicing the CTD carousel

 

 

 

 

 

 

 

 

 

 

 

 

 

Shipmate Spotlight: An Interview with Ensign Benjamin Kaiser

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Ensign Benjamin Kaiser, NOAA Corps

Tell me a little more about the NOAA Corps?
We facilitate NOAA scientific operations aboard NOAA vessels like hydrographic work making charts, fisheries data collection, and oceanographic research.

What do you do up on the bridge?
I am a Junior Officer of the Deck (JOOD), so when I am on the bridge driving the ship, I am accompanied by an Officer of the Deck (OOD). I am on my way to becoming an OOD. For that you need 120 days at sea, a detailed workbook completed, and the Commanding Officer’s approval.

What education or training is required for your position?
I have an undergraduate degree in Marine Science from Boston University. My training for NOAA Corps was 19 weeks at the Coast Guard Academy in New London, Connecticut– essentially going through Coast Guard Officer Candidate School.

What motivated you to join the NOAA Corps?
A friend of mine was an observer on a fisheries boat, and she told me about the NOAA Corps. When I was in high school and college, I didn’t know it was an option. We’re a small service, so recruiting is limited; there’s approximately 320 officers in the NOAA Corps.

What do you enjoy the most about your work?
I love not being in an office all the time. In the NOAA Corps, the expectation is two years at sea and then a land assignment. The flexibility appeals to me because I don’t want to be pigeonholed into one thing. There are so many opportunities to learn new skills. Like, this year I got advanced dive training for Nitrox and dry suit. I don’t have any regrets about this career path.

What is the most challenging part of your work?
There’s a steep learning curve. At this stage, I have to be like a sponge and take everything in and there’s so much to learn. That, and just getting used to shipboard life. It is difficult to find time to work out and the days are long.

What are your duties aboard the Oscar Dyson?
I am on duty 12pm to midnight, rotating between working on the bridge and other duties. I am the ship’s Safety Officer, so I help make sure the vessel is safely operating and coordinate drills with the Commanding Officer. I am also the Training Officer, so I have to arrange the officers’ and crew members’ training schedules. I am also in charge of morale/wellness, ship’s store, keys, radios, and inspections, to name a few.

When did you know you wanted to pursue a marine career?
I grew up in Rhode Island and was an ocean kid. I loved sailing and swimming, and I always knew I would have an ocean-related career.

How would a student who wanted to join the NOAA Corps need to prepare?

Students would need an undergraduate degree from a college or university, preferably in a STEM field. Students could also graduate from a Maritime Academy. When they go to Officer Candidate School, they need to be prepared for a tough first week with people yelling at them. Then there’s long days of working out, nautical science class, drill work, homework, and lights out by 10pm!

What are your hobbies?
I enjoy rock climbing, competitive swimming, hiking, and sailing.

What do you miss most while working at sea?
There’s no rock climbing!

What is your favorite marine creature?
Sailfish because they are fast and cool.

Inside the Oscar Dyson: The Chem Lab

chemlab

This lab is called the Chem Lab (short for Chemical). For our survey, we don’t have that many chemicals, but it is a dry lab with counters for workspace when needed. This room is adjacent to the wet lab through a watertight door, so in between trawls, Emily and I spend a lot of time here.  In the Chem Lab, we charge batteries for the CamTrawl and the DropCam. There are also two computer stations for downloading data, AutoLength analysis, and any other work (like blogging!). There is a window port to the Hero Deck, where the CTD and DropCam are deployed from. In the fume hood, we store Methot net samples in bottles of formalin. There is a microscope for viewing samples. Note the rolling chairs have their wheels removed and there are tie-downs on cases so they are safer at sea. Major cribbage tournaments are also played in this room!

Personal Log

It has been so calm on this cruise, but I have to say that I was looking forward to some bigger waves! Well, Sunday night to yesterday afternoon we experienced some rain and rough seas due to a nearby storm. For a while the ship would do big rolling motions and then a quick lurchy crash. Sea waves were about 2 feet in height, but the swell waves were over 5 feet at times. When I was moving about the ship, I’d have to keep a hand on a rail or something else secured. In the wet lab while I was working, I would lean against the counter and keep my feet spread apart for better balance.

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Seas picked up and the ship was rocking and rolling!

Remember the Methot net? It is the smaller net used to catch macroplankton. We deployed one this week and once it came out of the water, it was rinsed and the codend was unscrewed. When we got the codend into the wet lab, we realized it was exclusively krill!

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The Methot net is deployed by the Survey Tech and deck crew members
Krill
#krillfordays

Krill are  small crustaceans that are found in all the world’s oceans. Krill eat plant plankton (phytoplankton), so they are near the bottom of many marine food chains and fed on by creatures varying from fish like pollock to baleen whales like humpbacks. They are not so small that you need a microscope to see them, but they are tiny. We took a subsample and preserved it and then another subsample to count individuals…there were over 800 krill in just that one scoop! Luckily, we had them spread out on a board and made piles of ten so we did not lose count. It was tedious work moving individual krill with the forceps! I much prefer counting big things.

I love it when there is diversity among the catch from the AWT trawls. And, we caught some very memorable and unique fish this week.  First was a beautiful Shortraker Rockfish (Sebastes borealis). Remember, like the Pacific Ocean Perch, its eyes bulge when its brought up from depth. The Shortraker Rockfish is an open-water, demersal species and can be one of the longest lived of all fish. There have  been huge individuals caught in Alaskan waters that are over 100 years old. This fish was not particularly big for a Shortraker, but I was impressed at its size. It was probably my age.

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Holding a Shortraker Rockfish. Photo by Emily Collins
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Smooth Lumpsucker fish: so ugly it’s cute?! Photo by Mackenzie Wilson

We also caught a Smooth Lumpsucker (Aptocyclus ventricosus). It was inflated because it was brought up from depth, a form of barotrauma. This scaleless fish got its name for being shaped like a “lump” and having an adhesive disc-shaped “sucker.” The “sucker,” modified pelvic fins, are located ventrally and used to adhere to substrate. These pelagic fish are exclusively found in cold waters of the Arctic, North Atlantic, and North Pacific. The lumpsucker fish, and its roe (eggs) are considered delicacies in Iceland and some other countries.

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You can see the “sucker” on the bottom of its body. Photo by Mackenzie Wilson

Pollock are pretty slimy and they have tiny scales, so when we process them, everything gets covered with a kind of speckled grey ooze. However, when we trawled the other day and got a haul that was almost entirely Pacific herring (Clupea pallasii), I was amazed at their scales. For small fish, the herring had scales that were quite large and glistened like silvery sequins. The herring’s backs are an iridescent greenish-blue, and they have silver sides and bellies. The silver color comes from embedded guanine crystals, leading to an effective camouflage phenomenon in open water.

As this last week comes to a close, I am not ready to say goodbye…

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Herring scales are nature’s sequins

Cristina Veresan, Icthysticks and Otoliths? August 9, 2015

NOAA Teacher at Sea
Cristina Veresan
Aboard NOAA Ship Oscar Dyson
July 28 – August 16, 2015 

Mission: Walleye Pollock Acoustic-Trawl survey
Geographical area of cruise: Gulf of Alaska
Date: Sunday, August 9, 2015

Data from the Bridge:
Latitude: 59°28.8’ N
Longitude: 145°53.2’ W
Sky: Rain
Visibility: 7 miles
Wind Direction: SSE
Wind speed: 13 knots
Sea Wave Height: 1-2 feet
Swell Wave: 3 feet
Sea Water Temperature:  16.0°C
Dry Temperature:  14.5°C

Science and Technology Log

Our wet lab is outfitted with novel technology that makes processing the catch much more efficient. All of our touchscreen computers in the wet lab are running a program, designed by MACE personnel, called Catch Logger for Acoustic Midwater Survey (CLAMS). Once we enter the haul number and select the species that were caught, most of the data populates automatically from the lab instruments. For example, the digital scale is synced with the computer, so the weights are automatically recorded in CLAMS when a button is pushed. Also, an electronic fish measuring board called the “Icthystick,” designed by MACE IT specialist Rick Towler, is used to measure fish lengths. The fish’s head is placed at one end of the measuring board; when you place a finger stylus (with a magnet mounted inside it) at the end of the tail, the length is automatically recorded in CLAMS. The CLAMS system creates a histogram (type of graph) of all the lengths measured, and scientists archive and review this important data.

CLAMS
The CLAMS program records our catch
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The “Icthystick” AKA “Fish Stick” Photo by Darin Jones
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A digital scale connected to the CLAMS system

What can fisheries scientists learn from a pollock’s ear bones? The ear bones, called otoliths, have layers that can be counted and measured to determine the fish’s age and growth over the years of its life. Fish otoliths are glimpses into the past and their layers of proteins and calcium composites can sometimes offer clues about climate and water conditions as well. For our sub-sample of pollock, in addition to length, weight, and sex data, we will remove and archive the otoliths. We have to slice into the head and extract the two bony otoliths with forceps. The otoliths are then placed into a vial of ethanol with a bar code that has been scanned into the CLAMS system and assigned to the individual pollock they came from. Therefore, when all the otoliths are sent back to the lab in Seattle, ages of the fish can be confirmed. We sometimes collect other biological samples as well. In Seattle, there are scientists working on special projects for certain species, so sometimes we take a fin clip or an ovary sample from fish for those colleagues.

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After a slice is made across the head, the otoliths can be removed with forceps
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The otoliths in glycerol thymol (the bar code is on the opposite side of the vial)

 

 

Shipmate Spotlight: An interview with Rick Towler 

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Rick Towler, IT Specialist Photo by Darin Jones

What is your position on the Oscar Dyson?
I am an IT Specialist at MACE. I spend about 4 weeks total at sea and the rest of my time in our Seattle office. I have been in my position for 11 years.

What training or education do you need for your position?
My background is in wildlife biology, but I have had a lifelong interest in computers and electronics. I was lucky enough to get an internship with a physical oceanographer and started writing data analysis software for him. That got me on my career path, but for the most part, I have taught myself.

What do you enjoy the most about your work?
I love the freedom to creatively solve problems. There’s a lot of room to learn new things in my position. Like when we started on the “Icthystick” I had never done any electronics like that but I was able to innovate and make something that works. The scientists provide the goals and I provide the gear!

Have you had much experience at sea?
No, I get seasick! I am usually the first to go down with it. Before I joined MACE I had no real sea time. When I get sick, I just have to rest and take medication. I am so lucky that this leg of the survey has been very calm.

What are your duties of your position in Seattle and at sea?
In general, I write software and design and develop instruments to help us do our job better. Along with my colleague, Scott Furnish, I am also responsible for installing and maintaining the equipment used during the survey. When at sea, I make sure all the data is being backed up. I respond to any equipment issues and fix things that are not working properly.

When did you know you wanted to pursue a marine career?
I did not necessarily know I wanted a marine career, but I knew I wanted to be involved in science. I love that my job now is a mix of natural science and computer technology. It’s important to me to have a job I think is meaningful.

What are your hobbies?
I enjoy family time: playing with my kids and hiking and biking together. I also love playing with my dog and building things with my kids.

What do you miss most while working at sea?
Pizza! And my family and my dog.

What is your favorite marine creature?
Tufted puffin because they are cute. I’m a bird guy.

Inside the Oscar Dyson: The Bridge

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The main console (left) and the navigation station (right)

The bridge of a ship is an enclosed room or platform from which the ship is commanded. Our bridge is commended by officers of the NOAA Corps, one of the uniformed services of the United States. From the bridge, officers can control the ship’s movements, radar, IT (information technology), communications, trawling and everything else to operate the ship. Full control of the ships generators and engines is from the engine room, although there is a repeater display, so officers can monitor these systems. In our bridgethere is a main console from which the ship is steered. There are also consoles on other sides of the room, so the officers can control the ship when we are pulling up to the dock or when equipment is being deployed off the stern, starboard side, or port side. There is a navigation station where charts are stored and courses are plotted. For our cruise, courses are plotted on paper charts as well as two different digital charts. The bridge is surrounded by windows and the view is incredible!

Personal Log

Each fish we catch has a particular scent, some more “fishy” than others. But when Darin told me to smell a capelin (Mallotus villosus) I discovered something quite surprising. The small, slender fish smells exactly like cucumber. Or should I say that cucumbers smell exactly like capelin? It is amazing!

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Capelin are in the smelt family: I smelt a smelt!

After all these clear sunny days, we had our first foggy one, a complete white out! It gave me an appreciation for the officers that have to navigate through these conditions using radar alone. I also noticed the fog horn sounded every two minutes; Ensign Ben told me that this is a nautical rule when visibility is less than 2 miles and the ship is underway. In between blasts, I scooted out to the bow to take the photo below.

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Thick fog surrounded us

I have seen two different whales on my trip so far. I saw one humpback whale from a distance while it was feeding. It was tough to make out the whale itself, but it was easy to spot the flock of birds that was gathered on the water’s surface. I have also always wanted to see an orca whale, and I finally got my chance. It was a fleeting encounter. I had just stepped out onto the deck and saw an orca surface. I raised my camera as it surfaced again and managed to take a picture of the dorsal fin. Unfortunately, our ship and the whale were cruising pretty fast in opposite directions. But it was still a magical moment to observe this amazing creature in its natural habitat.

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A feeding humpback whale
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A cruising orca whale

Like I have said before, working on a moving platform has its challenges. Even getting around a ship presents a unique set of peculiarities. First of all, most doorways have 4-inch rails on the floor. When you are stumbling down at 4am to begin your shift or excitedly moving outside to see a whale, you have to keep those in mind! Most interior doors are pretty standard, although some come equipped with hooks at the top in order to secure them open. However, the exterior doors are watertight and must be handled appropriately. To open them from either side, you first have to push the lever up and then open the door by the handle. It is really important to avoid placing your hand in the door frame while the door is open because the thick, heavy door would crush your hand is if it swung shut. For this reason, and to keep the ship secure, you also have to remember to close these doors behind you and pull down the lever on the other side. On account of a nearby storm, we are supposed to get some big seas overnight, so now everything must be secured!

Ah, the joys of shipboard living!

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(from left) a raised door frame, a latch on the back of a door, and a watertight exterior door

Kathleen Gibson, Conservation: Progress and Sacrifice, August 6, 2015

 NOAA Teacher at Sea
Kathleen Gibson
Aboard NOAA Ship Oregon II
July 25 – August 8, 2015

Mission: Shark Longline Survey
Geographic Area of the Cruise: Atlantic Ocean off the Florida and Carolina Coast
Date: Evening, Aug 6,2015

Coordinates:
LAT   3035.997   N
LONG   8105.5449 W 

Weather Data from the Bridge:
Wind speed (knots): 6.8
Sea Temp (deg C): 28.3
Air Temp (deg C):  28.9

I’ve now had the chance to see at least 9 different shark species, ranging from 1 kg to over 250 kg and I’ve placed tags on 4 of the larger sharks that we have caught.  These numbered tags are inserted below the shark’s skin, in the region of the dorsal fin.  A small piece from one of the smaller fins is also clipped off for DNA studies and we make sure to  record the tag number. If a shark happens to be recaptured in the future, the information gathered will be valuable for population and migration studies. The video below shows the process.

Tagging a Nurse Shark Photo: Ken Wilkinson
Tagging a nurse shark.
Photo: Ken Wilkinson

 

After checking that the tag is secure, I gave the shark a pat.  I agree with Tim Martin’s description that it’s skin feels like a roughed-up basketball.

 

We’ve had a busy couple of days.   The ship is further south now, just off the coast of Florida, and today we worked three stations. The high daytime temperatures and humidity make it pretty sticky on deck but there are others on board working in tougher conditions.

Many thanks to Jack Standfast for the engine room tour.
Many thanks to Jack Standfast for the engine room tour.

Yesterday, during a brief period of downtime, I took the opportunity to go down to the engine room. Temperatures routinely exceed 103 o F, and noise levels require hearing protection.  My inner Industrial Hygienist (my former occupation) kicked in and I found it fascinating; there is a lot going on is a small space.  My environmental science students won’t be surprised at my excitement learning

Here it is... The RO unit!
Here it is… The RO unit!

about the desalination unit (reverse osmosis) for fresh water generation and energy conversions propelling the vessel.

I know, I know… but it was really interesting.

 

Science and Technology – Conservation

Sustainability,  no matter what your  discipline is, refers to the wise use of resources with an eye toward the future. In environmental science we specifically talk about actively protecting the natural world through conservation of both species and habitat.   Each year when I prepare my syllabus for my AP Environmental Science course, I include the secondary title “Working Toward Sustainability”.  I see this as a positive phrase that establishes the potential for renewal while noting the effort required to effect change.

Sustainability is the major focus of NOAA Fisheries (National Marine Fisheries Service) as it is “responsible for the stewardship of the nation’s ocean resources and their habitat.”  I’m sure that most readers have some familiarity with the term endangered species or even the Endangered Species Act, but the idea that  protection extends to habitats and essential resources may be new.

Getting the hook out of the big ones is equally challenging.
Getting the hook out of the big ones is equally challenging.

Regulation of  U.S. Fisheries

Marine fisheries in the United States are primarily governed by the Magnuson-Stevens Fishery Conservation and Management Act, initially passed in 1976. Significant reductions in key fish populations were observed at that time and the necessity for improved regulatory oversight was recognized.  This act relied heavily on scientific research and was intended to prevent overfishing, rebuild stocks, and increase the long-term biological and economic viability of marine fisheries. It was this regulation that extended U.S. waters out to 200 nautical miles from shore.  Previously, foreign fleets could fish as close as 12 nautical miles from U.S

Two sandbar sharks on the line.
Two spinner sharks on the line.

shores.

Under this fisheries act, Regional Fishery Management Councils develop Fishery Management Plans (FMP) for most species (those found in nearby regional waters) which outline sustainable and responsible practices such as harvest limits, seasonal parameters, size, and maturity parameters for different species. Regional councils rely heavily on research when drafting the FMP, so the work done by NOAA Fisheries scientists and other researchers around the country is critical to the process.  Drafting a Fishery Management Plan for highly migratory fish that do not remain in U.S. waters is challenging and enforcement even more so.  Recall from a previous blog that great hammerheads are an example of a highly migratory shark.

Threats to Shark Populations and Conservation Efforts

Shark populations around the globe suffered significantly between 1975 and 2000, and for many species (not all sharks and less in the USA) the decline continues. This decline is linked to a number of factors.  Improved technology and the development of factory fishing allows for increased harvest of target species and a subsequent increase in by-catch (capture of non-target fish). Efficient vessels and refined fishing techniques reduced fish stocks at all levels of the food web, predator and prey alike.

More significantly, the fin fishing industry specifically targets sharks and typical finning operations remove shark fins and throw the rest of the shark overboard.  These sharks are often still living and death results from predation or suffocation as they sink.  Shark fins are a desirable food product in Asian dishes such as shark fin soup, and are an ingredient in traditional medicines.  They bring a high price on the international market and sharks with big fins are particularly valuable.

A scalloped hammerhead in the cradle. This was the fist shark I tagged.
A scalloped hammerhead in the cradle. This was the fist shark I tagged.

Sandbar (Carcharhinus plumbeus) and great hammerheads (Sphyrna mokarran) and scalloped hammerheads (Sphyrna lewini) that we have seen have very large dorsal and pectoral fins, which are particularly desirable to fin fisherman.  There are many groups, international and domestic, working to reduce fin fishing, but the high price paid for fins makes enforcement difficult. The Shark Finning Prohibition Act implemented in 2000, in combination with the Shark Protection Act of 2010 sought to reduce this practice.  These acts amended Magnusen-Stevens (1976) to require that all sharks caught in U.S. waters have their fins intact when they reach the shore.  U.S. flagged vessels in international waters must also adhere to this ban, therefore no fins should be present on board that are not still naturally attached. The meat of many sharks is not desirable due to high ammonia levels, so the ban on fin removal has dramatically reduced the commercial shark fishing industry in the United States. (Read about some good news below in my interview with Trey Driggers )

The video below featuring the Northwest Atlantic Shark cooperative summarizes these threats to shark populations.

It must also be mentioned that in the 25 years after the release of the book and film “Jaws”, fear and misunderstanding fueled an increase in shark hunting for sport. The idea that sharks were focused human predators with vendettas led many to fear the ocean and ALL sharks. In his essay “Misunderstood Monsters,” author Peter Benchley laments the  limited research available about sharks 40 years ago,  even stating that he would not have been able to write the same book with what we now know.  He spoke publicly about the need for additional research and educational initiatives to spread knowledge about ocean ecology.

Close up of our first cradled sandbar shark.
Close up of our first cradled sandbar shark. This is one of my favorite pictures.

The United States is at the forefront of shark research, conservation and education and in the intervening years, with the help of NOAA Fisheries and many other scientists, we have learned much about shark ecology and marine ecosystems. It’s certain that marine food webs are complex, but that complexity is not always fully represented in general science textbooks. For example, texts often state that sharks are apex predators (top of the food chain).  This applies to many

This one is pretty big for an Atlantic sharpnose. Photo Credit: Kristin Hannan
This one is pretty big for an Atlantic sharpnose.
Photo Credit: Kristin Hannan

species including great white and tiger sharks, but it doesn’t represent all species.  In truth, many shark species are actually mesopredators (mid level), and are a food source for larger organisms.  Therefore conservation efforts need to extend through all levels of the food web.

The Atlantic sharpnose  (Rhizoprionodon terraenovae) and Silky Shark (Carcharhinus falciformis) are examples of mesopredators.  It was not uncommon for us to find the remains of and small Atlantic sharpnose on the hook with a large shark that it had attracted.

Sandbar shark with Atlantic sharpnose also on the line.
Sandbar shark with Atlantic sharpnose also on the line.

 

William  (Trey) Driggers – Field Research Scientist – Shark Unit Leader ( is there a III?)

Its a beautiful day on the aft deck. William" Trey" Driggers is the Lead Scientist of the Shark Unit. Photo: Ian Davenport
Its a beautiful day on the aft deck. William” Trey” Driggers is the Lead Scientist of the Shark Unit.
Photo: Ian Davenport

Trey is a graduate of Clemson University and earned his Ph.D at the University of South Carolina.  He’s been with NOAA for over 10 years and is the Lead Scientist of the Shark Unit, headquartered in Pascagoula, MS. His responsibilities include establishing and modifying experimental protocols and general oversight of the annual Shark/Red Snapper Longline Survey. Trey has authored numerous scientific articles related to his work with sharks and is considered an expert in his field.  He is a field biologist by training and makes it a point to participate in at least one leg of the this survey each year.

Sandbar shark ( Carcharhinus plumbeus)
Sandbar shark (Carcharhinus plumbeus)

I asked Trey if analysis of the data from the annual surveys has revealed any significant trends among individual shark populations. He immediately cited the increased number of sandbar sharks and tied that to the closure of the fin fisheries. Approximately 20 years ago, the Sandbar shark population off of the Carolina and Florida coasts was declining. Trey spoke with an experienced fisherman who recalled times past when Sandbar sharks were abundant. At the time Trey was somewhat skeptical of the accuracy of the recollection — there was no data to support the claim.  Today the population of Sandbar sharks is robust by comparison to 1995 levels, and the fin removal legislation is likely a major factor.  Having the numbers to support this statement illustrates the value of a longitudinal study.

Trey notes that it’s important for the public to know of the positive trends like increases in Sandbar shark populations and to acknowledge that this increase has come at a cost.  The reduction and/or closure of fisheries have had radiating effects on individuals, families and communities.  Fishing is often a family legacy, passed down through the generations, and in most fishing communities there is not an easy replacement. In reporting rebounding populations we acknowledge the sacrifices made by these individuals and communities.

Personal Log- Last posting from sea. 

Thirty minutes before leaving Pascagoula we were informed that the V-Sat was not working and that we would likely have no internet for the duration of the cruise.

Pascagoula at night.
Pascagoula at night.

We had a few minutes to send word to our families and in my case, TAS followers. I think most of us were confident a fix would happen at some point, but we’re still here in the cone of silence. It’s been challenging for all on board and makes us all aware of how dependent we are on technology  for communication and support.  I’ve gotten a few texts, which has been a pleasant surprise. One tantalizing text on the first day said “off  to the hospital  (to give birth)”, and then no follow-up text for weeks.  That was quite a wait!  I can imagine how it was aboard ship in times past when such news was delayed by months—or longer.  I was looking forward to sharing photos along the way, so be prepared for lot of images all at once when we get to shore!  As for my students, while it would have been nice to share with you in real time, there is plenty to learn and plenty of time when we finally meet.

Captain Dave Nelson
Captain Dave Nelson

I’d like to thank Dave Nelson, the Captain of the Oregon II, who greeted me each day saying  “How’s it going Teach?” and for always making me feel welcome. Thank you also to all of those working in the Teacher at Sea Program office for making this experience possible.  Being a part of the Shark Longline Survey makes me feel like I won the TAS lottery.  I’m sure every TAS feels the same way about their experience.

Special thanks to Kristin Hannan, Field Party Chief Extraordinaire, for answering my endless questions (I really am a lifelong learner…), encouraging me to take on new challenges, and for her boundless energy which was infectious. Sharks are SOOO cool.

Here’s a final shout out to the day shift–12 pm-12 am–including the scientists, the Corps, deck crew and engineers for making a great experience for me.  Ian and Jim – It was great sitting out back talking. I learned so much from the two of you and I admire your work.

Ian Davenport, Jim Nienow and me relaxing on the aft deck between stations. Photo: Trey Driggers
Ian Davenport, Jim Nienow, and me relaxing on the aft deck between stations. Photo: Trey Driggers

And, to all on board the Oregon II, I admire your commitment to this important work and am humbled by the personal sacrifices you make to get it done.

Day shift operating like clockwork Photo Credit: Ian Davenport
Day shift operating like clockwork.
Photo Credit: Ian Davenport
Awesome day shift ops. Photo Credit: Ian Davenport
Awesome day shift ops. Getting it done!
Photo Credit: Ian Davenport

This has been one of the hardest and most worthwhile experiences I’ve ever had. It was exhilarating and exhausting, usually at the same time.  I often encourage my students to take on challenges and to look for unique opportunities, especially as they prepare for college.  In applying to the TAS program I took my own advice and, with the support of my family and friends, took a risk.  I couldn’t have done it without you all.  This experience has given me a heightened respect for the leaps my students have made over the years and a renewed commitment to encouraging them to do so.  Who knows, they may end up tagging sharks someday. Safe Sailing Everyone.

Sunset over over the Atlantic Ocean. August 5, 2015
Sunset over over the Atlantic Ocean. August 5, 2015

“Teach”

Learn more about what’s going on with Great White sharks by listening to the following NOAA podcast:
Hooked On Sharks

A few more photos…

The ones that got away...
The ones that got away…  It took something mighty big to bend the outer hooks.

 It took teamwork to get a hold of this silky shark (Carcharhinus falciformis).

silkyondecksilky measuresilky hold

 

Cristina Veresan, Sorting the Catch, August 5, 2015

NOAA Teacher at Sea
Cristina Veresan
Aboard NOAA Ship Oscar Dyson
July 28 – August 16, 2015 

Mission: Walleye Pollock Acoustic-Trawl Survey
Geographical area of cruise: Gulf of Alaska
Date: Wednesday, August 5, 2015

Data from the Bridge:
Latitude: 60° 46.4′ N
Longitude: 147° 41.0′ W
Sky: Clear
Visibility: 10 miles
Wind Direction: E
Wind speed: 5 knots
Sea Wave Height: 0-1 feet
Swell Wave: 0 feet
Sea Water Temperature: 16.8 °C
Dry Temperature: 16.0° C

Science and Technology Log

What about all those fish we bring onboard? Our Lab Lead Emily oversees the processing of the catch and determines which protocols or sampling strategies are most appropriate. She and I, along with the Survey Tech on duty, work together to identify, weigh, and measure the catch and collect any necessary biological samples such as otoliths or ovaries. The first job is to sort everything, and we continue sorting until the table is empty. We identify the creatures and organize them by species into different baskets. We end up with many baskets of pollock, usually hundreds of individuals. If distinct length groups of pollock are present we sort them by length (which is indicative of age class) and sample each group separately. All of the basket(s) are weighed to get a total weight per species (or length group) for the haul.

One of many baskets of pollock
One of many baskets of pollock
'Bloke' or 'Sheila' pollock? It's all sorted out here
‘Bloke’ or ‘Sheila’ pollock? It’s all sorted out here

For pollock estimated to be age two and older, we sex and length about 300 individuals per haul. When I say sex a pollock, I mean we must determine if the fish is male or female. Pollock do not have any external features to determine which sex they are so we must slice open the belly of the fish, pull back the liver and look for the gonads; females have a light pinkish to orange colored two-lobed ovary, while males have a whitish bubbled string of testes. The sex-sorting table has a large basin next to a partitioned bin cheekily labeled with a “blokes” section (for males) and a “sheila” section (for females). Once the sex of the fish is determined, we toss it in the proper bin. Each bin opens to a length board from which we measure all of the fish in the bin. For creatures other than our targeted pollock, we collect unsexed length and weight data from a smaller sample of individuals.

Pollock gonads: female ovaries
Pollock gonads: female ovaries
Pollock gonads: male testes
Pollock gonads: male testes
spawning
A spawning female! Note the ovaries, swollen with eggs.

Shipmate Spotlight: Interview with Darin Jones

Darin Jones, Scientist and Field Party Chief
Darin Jones, Research Fisheries Biologist, Field Party Chief (and my awesome blog editor)!

What is your position on the Oscar Dyson?
I am a Research Fisheries Biologist. I am also the field party chief in charge of the scientific team for leg 3 of our summer survey. I have been with the National Marine Fisheries Service for 8 years.

What training or education do you need for your position?
The ability to go to sea and not get seasick is key, and a solid marine biology education with plenty of math and statistics. I earned my undergraduate degree in marine biology from UNC at Wilmington, then a Masters in Fisheries Resources at the University of Idaho.

What do you enjoy the most about your work?
Being able to get out in the field and see the beautiful scenery of Alaska instead of being stuck behind a desk all the time. And, of course, meeting wonderful new people on each cruise.

Have you had much experience at sea?
After my undergraduate work, I was an observer for five years in Alaska on trawlers, longliners, and pot fishing boats and got lots of sea time. In New England I worked for about 4 years on a cod tagging program where we went out to Georges Bank and caught Atlantic Cod to tag and release.  I have also worked at fish hatcheries in California and South Carolina where we went to sea to collect brood stock. In my current position, I am at sea for about 3 months a year.

Where do you do most of your work aboard the ship? What do you do?
Most of my work is in “the Cave” (Acoustics Lab), where I monitor the acoustics equipment and analyze the data. When we are trawling, I go to the bridge to help guide the fishing operation. As field party chief, I direct all science operations, make daily decisions pertaining to the survey mission and its completion based on weather and time available, and I’m the liaison between the science party and the ship’s officers.

When did you know you wanted to pursue a marine career?
I have loved the ocean since I started surfing in high school. During college, I was looking for a career that would keep me near the ocean, and marine biology was a natural fit.

What are your hobbies?
I am a surfer and a woodworker, and I enjoy and playing the guitar.

What do you miss most while working at sea?
My family for sure. My own bed!

What is your favorite marine creature?
My porcupine pufferfish that I had during grad school; he had a personality and was always happy to see me.

Inside the Oscar Dyson: The Lounge

The lounge
The ship’s lounge

When you work hard at sea, you need a place to unwind and relax after a 12-hour shift. The lounge is right across the hall from my stateroom, and it is a great gathering place. It has comfy couches, a big bean bag chair, and a book library. The large television, like the televisions in the staterooms, has Direct TV with many channels. I have not watched television until this week when I began watching the last ever episodes of the Jon Stewart’s The Daily Show. The ship also has a large collection of DVDs.

 

 

Personal Log

We left Seward and headed up the coast to Prince William Sound. I can see why the region is known for its breathtaking wilderness scenery: mountains, islands, and fjords. The coast is lined with both dense spruce forest and tidewater glaciers. In fact, most of this area is part of the Chugach National Forest, the second largest National Forest in the United States. The sound’s largest port is Valdez, the terminus of the Trans-Alaska Oil Pipeline. In 1989, the oil tanker Exxon Valdez ran aground on Bligh Reef after it left Valdez, which resulted in a massive oil spill that caused environmental destruction and wildlife deaths.

Cruising through Prince William Sound
Cruising through Prince William Sound

My favorite part of working in the wet lab is when it’s time to sort the catch. We tilt the table, open the gate, and all the fish roll in on the conveyor belt. You never know what you will find among the pollock and rockfish. A lot of the time, there are krill and shrimp mixed in with the fish. Occasionally, there will be another big fish like a Pacific Cod (Gadus macrocephalus). A few times this week, there have been some very interesting baby creatures in our trawls. When sorting, you have to take care not to miss them!

My Alaskan fisheries adventure continues…

COD
Here’s a big Pacific Cod…Photo by Emily Collins
littlefish
And here’s some of the baby creatures found in our catches: (clockwise from top left) an Atka mackerel, an Alaska eelpout, Squid, and Snailfish.

Kathleen Gibson, Hammerheads on the Line, August 4, 2015

NOAA Teacher at Sea
Kathleen Gibson
Aboard NOAA Ship Oregon II
July 25 – August 8, 2015

Mission: Shark Longline Survey
Geographic Area of the Cruise: Atlantic Ocean off the Florida and Carolina Coast
Date:  Aug 4, 2015

Coordinates:
LAT   3323.870N
LONG    07736.658 W

Great Hammerhead Photo Credit: Ian Davenport
Great Hammerhead (Photo Credit: Ian Davenport)

Weather Data from the Bridge:
Wind speed (knots): 28
Sea Temp (deg C): 29.2
Air Temp (deg C):  24.2

Early this morning the night shift caught and cradled a great hammerhead shark (Sphyrna mokarran). This is a first for this cruise leg. I’m sure that just saying “Hammerhead” conjures an image of a shark with an unusual head projection (cephalofoil), but did you know that there are at least 8 distinct Hammerhead species?  Thus far in the cruise we have caught 4 scalloped hammerheads (Sphyrna lewini), one of which I was fortunate to tag.

Science and Technology Log

All eight species of hammerhead sharks have cephalofoils with differences noted in shape, size, and eye placement, to name a few. Research indicates that this structure acts as a hydrofoil or rudder, increasing the shark’s agility. In addition, the structure contains a high concentration of specialized electro sensory organs (Ampullae of Lorenzini) that help the shark detect electric signals of other organisms nearby.  The eye placement at each end of the cephalofoil allows hammerhead sharks to have essentially a panoramic view with only a slight movement of their head – quite handy when hunting or avoiding other predators.

 

Comparison of Scalloped and Great Hammerhead Sharks

Comparison of Scalloped and Great Hammerhead Sharks
Image Credit: NOAA Fisheries Shark Species

Great hammerhead sharks are highly migratory. They are found worldwide in tropical latitudes, and at various depths. There are no  geographically Distinct Population Segments (DPS) identified. The great hammerhead, as its name implies, is the largest of the group and average size estimates of mature individuals varies between 10-14 ft in length with a weight approximately 500 lb.; the largest recorded was 20 ft in length. The one we caught was ll ft. in length.

Great Hammerhead Photo Credit: Ian Davenport
Great Hammerhead
Photo Credit: Ian Davenport


Great Hammerhead
Great Hammerhead

As with most shark species, the numbers declined rapidly between 1975 and 1995 due to the fin fishing industry and focused sport fishing often fueled by fear and misinformation. One has to wonder what the average length was before that time.

Scalloped Hammerhead sharks are the most common hammerhead species. Their habitat overlaps that of the great hammerhead, though they are more often found in slightly shallower waters. In contrast to the great hammerhead, scalloped hammerheads are only semi-migratory, and scientists have identified Distinct Population Segments around the world.  This is important information when evaluating population size and determining which groups, if any, need regulatory protection.

Weighing a small Scalloped Hammerhead Photo Credit: Ken Wilkinson
Weighing a small scalloped hammerhead
Photo Credit: Ken Wilkinson

 

Scalloped Hammerhead on deck. Photo: Erica Nuss
Scalloped hammerhead on deck
Photo: Ian Davenport

The average life expectancy for both species is approximately 30 years.  Males tend to become sexually mature before females, at smaller weights; females mature between 7-10 years (sources vary). In my last log I discussed shark reproduction – Oviparous vs. Viviparous. (egg laying vs. live birth).  All hammerheads are viviparous placental sharks but reproductive patterns do differ. Great hammerheads bear young every two years, typically having 20-40 pups. A great hammerhead recently caught by a fisherman in Florida was found to be pregnant with 33 pups. Scalloped have slightly fewer pups in each brood, but can reproduce more frequently.

 

Career Spotlight – NOAA Corps

Setting and retrieving the Longline requires coordination between Deck Operations and the Bridge.  Up until now I’ve highlighted those on deck. Let’s learn a bit about two NOAA officers on the Bridge.

The NOAA Corps is one of the 7 Uniformed Services of the United States and all members are officers. The Corps’ charge is to support the scientific mission of NOAA, operating and navigating NOAA ships and airplanes.  Applicants for the Corps must have earned Bachelor’s degree and many have graduate degrees.  A science degree is not required but a significant number of science units must have been completed.  It’s not unusual for Corps recruits to have done post-baccalaureate studies to complete the required science coursework.  New recruits go through Basic Officer’s Training at the Coast Guard Academy in New London, Connecticut.

Lt. Lecia Salerno – Executive Officer (XO) – NOAA 

Lt. Lecia Salerno at the Helm
Lt. Lecia Salerno at the  helm or the Oregon II during Longline retrieval.

Lt. Salerno is a 10-year veteran of the NOAA Corps and has significant experience with ship operations.  She was recently assigned to the Oregon II as the XO. This is Lecia’s first assignment as an XO and she reports directly to Captain Dave Nelson. In addition to her Bridge responsibilities, she manages personnel issues, ship accounts and expenditures. During these first few weeks on her new ship, Lt. Salerno is on watch for split shifts – day and night – and is quickly becoming familiar with the nuances of the Oregon II.  This ship is the oldest (and much loved) ship in NOAA’s fleet, having been built in 1964, which can make it a challenge to pilot. It’s no small task to maneuver a 170-foot vessel up to a small highflyer and a float, and continue moving the ship along the Longline throughout retrieval.

Lecia has a strong academic background in science  and in the liberal arts and initially considered joining another branch of the military after college.  Her  assignments with  NOAA incorporate her varied interests and expertise, which she feels makes her job that much more rewarding.

Lt. Laura Dwyer on the Bridge of the Oregon II
Lt. Laura Dwyer on the Bridge of the Oregon II

Lt. Laura Dwyer- Junior Officer – NOAA Corps

Laura has always had a love for the ocean, but did not initially look in that direction for a career.  She first earned a degree in International Business from James Madison University.  Her interest in marine life took her back to the sea and she spent a number of years as a scuba diving instructor in the U.S. and Australia.  Laura returned to the U.S.  to take additional biology coursework.  During that time she more fully investigated the NOAA Corps, applied and was accepted.

Laura has been on the Oregon II for 1.5 years and loves her work.  When she is on shift she independently handles the ship during all operations and also acts as Navigator.  What she loves about the Corps is that the work merges science and technology, and there are many opportunities for her to grow professionally. In December Laura will be assigned to a shore duty unit that is developing Unmanned Underwater Vehicles (UUV).

Personal Log

Measuring a Sharpnose Photo: Kristin Hannan
Notice the white spots on the dorsal side of this atlantic sharpnose, characteristic of this species.
Photo: Kristin Hannan

It’s amazing to think that just over a week ago I held my first live shark.  We caught over  30 sharks at our first station and our inexperience showed.  At first even the small ones looked like all teeth and tail, and those teeth are not only sharp but carry some pretty nasty bacteria. It took all of us (new volunteers) forever to get the hooks out quickly without causing significant trauma to the shark–or ourselves.  A tail smack from this small-but-mighty tiger shark pictured below left me with a wedge-shaped bruise for a week!

Immature Male Tiger Shark. He's cute but he taught me a lesson with his tail.
Immature Male Tiger Shark.
He’s cute but he taught me a lesson with his tail.

Since then we have caught hundreds of sharks.  We’ve caught so many Atlantic Sharpnose that on occasion it seems mundane.  Then I catch myself and realize how amazing it is to be doing what I’m doing– holding a wild animal in my hands, freeing it from the circle hook (finally!), looking at the detailed pattern of its skin, and feeling it’s rough texture, measuring it and releasing it back into the sea.

Sandbar Shark on the Line
A beautiful sandbar shark on the line.

I’m pleased to be able to say that my day shift team has become much more confident and efficient.  Our mid-day haul yesterday numbered over 40 sharks, including a few large sharks that were cradled, and it went really smoothly.

Weighing in. Hook out - No Problem! Photo: Jim Nienow
An Atlantic Sharpnose weighing in at 2.1 kg.
Photo: Kristin Hannan

 

Out it Comes - No Problem Photo: Ian Davenport
Taking a closer look at an Atlantic Sharpnose shark.
Photo: Ian Davenport

At this point I’ve had a chance to work at most of the volunteer stations including baiting hooks, throwing off the high-flyer marker, numbering, gangions, throwing bait, data entry,  tagging shark, removing hooks, and measuring/ weighing.  A highlight of last night was getting to throw out the hook to pull in the high-flyer marker at the start of retrieval.  I’m not known for having the best throwing arm but it all worked out!

Ready to Throw Photo: Kristin Hannan
Ready to Throw
Photo: Kristin Hannan
Got it! Photo: Kristin Hannan
Right on Target!
Photo: Kristin Hannan

 

Question of the Day:  What is this?

Can you identify these?
Can you identify these?

NOAA SHARK FACTS: Bite off More that you can chew

For more on hammerheads: click

For my incoming  Marine Science students — Investigate two other hammerhead species. How are they distinguished from great hammerheads?