David Knight: Water Hauls and Spaghetti, July 13, 2018

NOAA Teacher at Sea

David Knight

Aboard NOAA Ship Pisces

July 10-23, 2018

 Mission: Southeast Fishery-Independent Survey

Geographic Area: Southeastern U.S. coast

Date: July 13, 2018

Weather Data from the Bridge:

Latitude: 33° 26.6 N
Longitude: 77
° 02.02 W
Sea wave height: 1- 3 ft
Wind speed: 10.4 kts
Wind direction: 39.9

Visibility: 10 nm
Air temperature: 30.2
°C
Barometric pressure: 1018.5 mb
Sky: Scattered Clouds

Science and Technology Log

Numerous physical, chemical, and biological factors determine the distribution of any organism in its environment, and throughout the first few days that traps have been set and retrieved I have witnessed changes in fish distribution firsthand.  Some factors affecting the distribution of fish would include water temperature and currents, available nutrients, the presence of predator or prey species, and the type of habitat substrate (e.g., sand/mud vs hardbottom vs pelagic). We learn in biology or marine science about species richness and species abundance. Species Richness is the number of different species one may find in a particular area; in one trap you may find four or five different species of fish with one particular species represented once and others represented in high numbers.  Large numbers of one particular species of fish would be considered a high Species Abundance.

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Stenotomus sp. from one trap.

Members of each team watch each trap as it rises out of the water hoping for both high species richness and abundance. On the second full day at sea a trap was brought up containing 262 total fish and 8 different species that included: 174 Black Sea Bass (Centropristis striata), 1 White Grunt (Haemulon plumierii), 1 Gray Trigger (Balistes capriscus), 1 Spottail Pinfish (Diplodus holbrookii), 1 Pinfish (Lagodon rhomboids), 67 Tomtate (Haemulon aurolineatum), 6 Bank Sea Bass (Centropristis striata), and 7 Stenotomous sp. Compared to other traps, both the richness and abundance present in this trap were high.  The abundance of Black Sea Bass in this trap was fairly high, but other traps during the day had a much greater number of exclusively Tomtate, creating a “Tomtate Tornado”.  Traps occasionally come up with nothing in them, to the disappointment of all—I quickly learned this is called a “water haul”. On July 12th, we caught 1060 fish, and the following day, July 13th, we caught 37 fish, and the distance between trap sets was only 10 miles!  This is why sampling from six different locations at a time and over a wide geographic area is important, one trap only gives you a glimpse into the fish in that particular area which may not represent the area’s true species distribution.  Sampling up to twenty-four different locations per day along the coasts of North and South Carolina, Georgia and Florida will allow members of the SEFIS group (Southeast Fishery-Independent Survey) to better understand the populations of fish in these waters, allowing state and federal agencies to make informed decisions about the management of these fish stocks.

Friday the Thirteenth…today has been both a low species richness and species abundance day, but it has produced some interesting finds, not least of which was an Almaco Jack (Seriola rivoliana). This large, I would say plain looking, fish has a long, extended dorsal and anal fin and look like they are built for speed. After the otoliths were removed, I was collecting scales to take back to my class for use during a lab when one of the scientists said, “If you want to see something really disgusting, we should fillet that fish so you can see some parasitic worms.”  Like any good parasite, Amberjack, or Spaghetti worms, take advantage of the feeding behaviors of multiple hosts. Passed up the food chain from eggs, to larvae and then into prey species of the Almaco Jack, the larvae take up residence in the muscle of the intermediate host Jack waiting for its final host species, a shark.  Once a shark consumes a Jack, the larva then become adult tapeworms within the digestive tract of sharks and from there, the entire life-cycle begins again……now that’s scary.

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Image from NCFishes.com

Personal Log

I have quickly learned how many different government agencies participate and contribute in the SEFIS survey. There are state biologists from the North Carolina Division of Marine Fisheries, South Carolina Department of Natural Resources, and from the Southeast Fisheries Science Center which is part of the National Marine Fisheries Service and NOAA. These various groups collaborate in data collection so accurate models can be created to estimate fish stocks. Estimates are obtained through fishery dependent and independent sampling methods.  Fishery dependent sampling involves gathering data from commercial and recreational fisherman through the use of surveys, phone apps, and going to the docks of these fisherman and sampling their catch. Because fisherman want to ensure a good catch, they will go to locations that they know are good fishing spots, or will only try and catch a particular species of fish, introducing statistical bias into the sample. Fishery independent sampling is what SEFIS does, collecting data at predetermined locations, not based on what they may or may not catch, thus decreasing statistical bias in the hope of obtaining a true picture of the fish populations. Together, both fishery dependent and independent sampling are then analyzed to create an assessments of the fish stock.

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Not a bad way to end the day. (photo by David Knight)

Did You Know?

You can see an 8.8 m long tapeworm that was pulled out of a human on display at the Meguro Parasitological Museum in Tokyo, Japan. The museum has over 300 different types of parasites on display.

 References:

Amberjack Worms

Amberjack Worms

Meguro Parasitological Museum

https://www.kiseichu.org/e-top

David Knight: Scup and Grouper and Grunt, oh my!, July 10, 2018

NOAA Teacher at Sea

David Knight Aboard NOAA Ship Pisces

July 10-23, 2018

Mission: Southeast Fishery-Independent Survey

Geographic Area: Southeastern U.S. coast

Date: July 10, 2018

Weather Data from the Bridge:

Latitude: 34 34.2’

Longitude: 76 56.6 W

Sea wave height: 0 – 1 ft

Wind speed: 7 kts

Wind direction: 230

Visibility: 10 nm

Air temperature: 29.8 C

Barometric pressure: 1011.9

Sky: Few clouds

Science and Technology Log

Today we set off on our two-week fishery survey off the coasts of North and South Carolina, Georgia, and Florida with Tropical Storm Chris lurking off the shores of the Carolinas. The officers and crew of NOAA Ship Pisces have been busy all morning preparing for departure and do not seem too concerned about the weather. There are a lot of moving parts on a ship this large with deck hands busy at work repairing, maintaining, and preparing equipment for this leg of the survey. A concern of the scientists is that a large refrigerator that is used to store bait fish is not operable, and after trying to repair the current one, as well as trying to find a replacement, it was decided that the survey leg should not be delayed so we will make due. One set of traps were set about 5 miles off the coast the first day with a haul of black sea bass, tomtate, gulf flounder, pigfish, pinfish, and a type of porgy. Each of the chevron (V-shaped) traps (Figure 1) have bait fish inside that attract the species and are fitted with two GoPro cameras, one facing the front and one facing the back of the trap. A numbered buoy is attached and then the trap is sent overboard and allowed to sit on the seafloor for about 90 minutes. Once the deck crew retrieve the traps, the fish in each trap are first sorted and then weighed and measured and then released back into the sea. A pre-determined number of fish are kept for additional analysis that includes the removal of gonads and otoliths–more on this in a future post.

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Figure 1. Chevron traps ready to deploy. (photo by David Knight)

One may ask, “If you are trying to conserve fish species, why are you killing them?”  A number of the fish that are caught are returned back to the sea successfully because of the speed and efficiency of the scientists that are removing the fish from the traps and taking the various measurements; however, some fish are killed in the process.  By taking small samples of fish at a variety of locations within the study area, a bigger picture of the overall distribution and abundance can be determined which will then allow for the proper management of important fish species in the Atlantic. The numbers of fish trapped are insignificant in the bigger picture.  As an example, approximately 200 metric tons of Black Sea Bass were caught off the coast of North Carolina in 2015 and 2016; today we caught a few hundred fish in the traps. What the scientists take is like putting a drop of food coloring in an Olympic-sized swimming pool–it is insignificant in the overall scheme of managing populations.

 Personal Log

The great American writer Mark Twain said, “Twenty years from now, you will be more disappointed by the things you didn’t do than those you did. So throw off the bowlines. Sail away from safe harbor. Catch the wind in your sails. Explore. Dream. Discover.”

Being in a classroom is much different than being in the field (or in this case, on the ocean) doing research.  I am determined to try my hand at as many tasks as I am allowed, and to experience as much as possible without getting in the way of the crew and scientists. When will I ever have another chance to remove gonads and otoliths from fish or string bait lines at 7 a.m.?  When a remora was captured, Dr. Bacheler recommended I experience the great sucking power of this fish, and paraphrasing Mark Twain, “I threw off the bowlines and explored.” I now have a nice remora hickey on my forearm even eight hours later and have decided to question the notion that remora and the animals to which they attach have a mutualistic relationship.  “Why would you do this?” you may ask, because the opportunity was there of course!

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Figure 2. Remora doing what a remora does! (photo by Nate Bacheler)

Did You Know?

 Many marine fish are capable of changing sex during their lifetime in a process called sequential hermaphroditism. Black Sea Bass (Centropristis striata) begin their lives as a female and may change to a male during their life depending on population conditions. This type of hermaphroditism is called protogynous (“proto-“ first or original; and “gyno-“ woman) hermaphroditism. In California, a common species of fish that undergoes protogynous hermaphroditism is the California Sheephead (Semicossyphus pulcher).

References:

NOAA Office of Fisheries. National Marine Fisheries Service. Commercial Fisheries Statistics. [https://www.st.nmfs.noaa.gov/commercial-fisheries/]

 

David Knight: Summer Adventures, June 26, 2018

NOAA Teacher at Sea

David Knight

Aboard NOAA Ship Pisces

July 10-23, 2018

 

Mission: Southeast Fishery-Independent Survey

Geographic Area: Southeastern U.S. coast

Date: June 26, 2018

 

Weather Data from my patio in Mission Viejo, California

Latitude: 33.64
Longitude: -117.62
Sea wave height: 0 m
Wind speed: 13 mph
Wind direction: East
Visibility: 8.6 nm
Air temperature: 24 C
Barometric pressure: 1014 mb
Sky: Clear

Personal Log and Introduction

What a summer I am having! I just got back from an eight-day adventure to Belize with sixteen of this year’s AP Biology students. During our trip we hiked in the rainforest both during the day and at night, snorkeled the meso-American reef at South Water Caye, went tubing in a limestone cave, visited the Mayan site of Xunantunich, hiked into the Actun Tunichil Muknal cave system to see Mayan artifacts and remains, and zip-lined above the rainforest in the Mayflower Bocawina National Park. Now I begin preparations for my Teacher at Sea adventure aboard NOAA Ship Pisces. What a life I lead… I sometimes feel as though I am living in a mashup episode of “Dora the Explorer”, “Where in the World is Carmen Sandiego”, and “The Secret Life of Walter Mitty”.

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El Castillo temple at Xunantunich. Behind me is Belize and Guatemala. (photo by David Knight)

I have been teaching at University High School in Irvine, California since 1990. UNI was my first and will be my only teaching position—I’ve found a great place and intend to teach there my entire career. The teachers in my department are not only my colleagues, they are my friends. I have so much respect for the staff at UNI because we all work hard to teach and serve the students and share a passion for investing in the lives of kids. The students at the school are motivated to learn, are respectful and encouraging of one another, and are supported by parents that value education. I frequently tell people, “when I got hired at UNI 28 years ago, I won the lottery!”

Throughout my career I have taught all levels of life science, from remedial biology to AP Biology and everything in between. My current teaching schedule includes Marine Science and AP Biology. I began teaching Marine Science four years ago and love the class. In Marine Science we get to study Oceanography and Marine Biology throughout the year so I get a chance to practice some of my physical science skills along with my love of biology. Teaching this class has reinvigorated me and has given me a chance to teach a diverse range of students. I know that my experience as a Teacher at Sea will benefit both Marine Science and AP Biology, but I also hope it will benefit my colleagues at UHS and in the Irvine Unified School District.

As previously mentioned, I just got back from a trip to Belize with my AP Biology students. For the past fifteen years I have been taking groups of AP Biology students outside the United States to see and experience the natural world first-hand. On our trips we have learned about tropical rainforest and coral reef systems, plants and animal diversity, and geology as well as many different cultures and customs in countries like Belize, Costa Rica, Peru, Ecuador, Honduras, Guatemala, and Iceland. My former students tell me that these trips have played an integral part of their high school experience and have given them opportunities to challenge themselves physically and mentally as well as a great appreciation for the world in which we live.

Me and my students
Me and my students on South Water Caye, Belize. (photo by David Knight)

As a Teacher at Sea I will be working with Dr. Nate Bacheler of the NOAA Southeast Fisheries Science Center aboard NOAA Ship Pisces.  The NOAA Ship Pisces is a 208 ft. ship that was designed specifically for fisheries studies. The ship is designed to sail quietly through the water in order to better collect samples using a variety of collection methods including hook and line, traps, and video systems.  During my cruise on NOAA Ship Pisces I will be helping scientists survey snapper and grouper to better understand their distribution and abundance for better management of these economically important species. Additionally, we will be collecting bathymetric and water quality data at various sample sites.