Laura Rodriguez, May 24th, 2010

NOAA Teacher at Sea
Laura Rodriguez
Aboard NOAA Ship Oscar Dyson
May 24 – June 2, 2012

Mission: Fisheries Surveys
Geographical Area: Eastern Bering Sea
Date: May 24, 2010

Pollock Survey Begins

Robert and Kerri deploy the CTD
Deploying the Bongo nets
The bongo nets are almost in
Retrieving the bongo nets, full of algae and hopefully full of Pollock Larvae

On Saturday, my watch began at 10:00 AM. Two of the scientists, Annette Dougherty and Kevin Bailey have watch from 4 AM until 4 PM. The other two scientists, Tiffany Vance and Steve Porter, have watch from 4 PM until 4 AM. I guess being the teacher they took pity on me and gave me half and half. Before getting to one of the stations, the scientists make sure that everything is ready. They lay out the bongo nets on the deck where they will be used. The bongo nets are two nets that from the top look like bongo drums. (See picture) There is an instrument attached to the bongo nets called a SEACAT that takes conductivity, temperature and salinity measurements during the tow. Inside the lab, buckets, bowls and tweezers are all laid out ready to be used.

As we approach each station, the bridge informs the scientists and survey technicians. The bongo nets have already been readied and are set to be deployed (put into the ocean) from the hero platform. When the OK is given, the nets are lifted by the hydrowinch to a point where they can be maneuvered over the rail and then they are lowered into the water. The nets are lowered until they are at 100 meters or 10 meters off the bottom. As they are lowered, the pilot of the boat keeps the wire at a 45° angle by moving the boat slowly forward. Once the nets reach their maximum depth, they are slowly brought back up again.  ( I tried to upload a video showing the deployment and retrieval of the bongo, but it won’t work so I’ll show you the video when I get back.

Pollock larvae under the microscope

When the nets clear the water, they are hosed down to get any organisms into the bottle on the end of the net (called the cod end.) The cod end is then removed and the contents of one net are poured into a bucket for sorting. The contents of the other net are preserved and sent to a lab in Poland where they use instruments to get a very accurate count of the Pollock.

Annette Dougherty and Kevin Bailey in the chem Lab

Inside the chem lab, the contents of the bucket are scooped out and poured little by little into a mixing bowl. We then perform a rough count by removing the very small Pollock larvae and any other fish larvae and put them into a petri dish with cold water (the petri dish is placed on top of ice.) They are only a few mm long (averaging between 6-10mm.) Once we have gone through the entire contents, the Pollock larvae are counted, photographed and the length measured. They are then placed into a labeled vial with 95% ethanol. The other fish larvae are placed in a separate vial in 100% ethanol. They are kept in case another scientific team needs the data. The Pollock larvae will be sent to the scientists’ lab back in Seattle where they will perform further analysis on them. I’ll tell you more about that in the next blog.

 

Answers to your questions:

Annalise – The ship travels at 12 knots when we are going between stations.

Abandon Ship drill – You need to know how to put on your survival suit

Matt T– The ship is very safe. Drills are conducted every week. My first day on the ship, we had a fire drill and abandon ship drill. (See photo of me in my survival suit.)

Dan – The Oscar Dyson observes and records a number of environmental conditions. The bridge takes weather readings every hour and keeps them in a weather log. These include wind direction, wind speed, seawater temperature, air temperature, air pressure, cloud cover, sea swell height and direction. Conditions in the water are also constantly monitored such as temperature, conductivity, salinity, and amount of oxygen.

Olivia – The bongo tow is one way to get fish eggs. The mesh used on the bongo nets is very fine). It is able to filter out these very small larval fish and fish eggs, too.

Brittany – There is no specific number of fish that need to be caught for this experiment. Part of the experiment is to see how many larval fish there are. For our rough count, the scientists measure 20 larvae to get an estimate of their size. They will then look at the otoliths (small inner ear bones) to estimate their age.

Euphausid – Krill
Copepod

Amy – Aside from the Pollock larvae in the nets, we have caught cod larvae, larval squid, fish eggs, amphipods, terapods, jellies, Euphausids or krill, copepods and the larvae of other fish. The nets are small enough that we don’t catch any large fish or other animals.

Josh W. and Jon – Joel Kellogg has the night shift, so I haven’t met him yet. Stephen Macri is not on this cruise so I can’t ask him your questions.

 

Questions for today

In your answers to the last blog, many of you researched the large animals that live here in the Gulf of Alaska. The most abundant organisms, however, are much smaller. Two organisms that are very important to the survival of the large animals here are copepods and Euphausids. The larval Pollock feed on the larval copepods that are called copepodites.

Find out what other animals feed on copepods and euphausids. Then, describe at least one food chain that includes copepods and one that includes krill. In your food chain start with a producer or autotroph Ex. Algae) and end with the highest level of consumer or predator (Ex. blue Whale)

 

Again, Please be sure to include the link to the website where you got your information.  Answer the questions in your own words writing complete sentences with as much detail as you can.

Karen Matsumoto, April 19, 2010

NOAA Teacher at Sea: Karen Matsumoto
Onboard NOAA Ship Oscar Elton Sette
April 19 – May 4, 2010

NOAA Ship: Oscar Elton Sette
Mission: Transit/Acoustic Cetacean Survey
Geographical Area: North Pacific Ocean; transit from Guam to Oahu, Hawaii, including Wake Is.
Date: Friday, April 16, 2010

Science and Technology Log

The research mission for this cruise is to follow a transit from Guam to O‘ahu, Hawai‘i via Wake Island, and conduct an acoustic (hearing) and visual (seeing) survey of cetaceans (whales and dolphins) along the way. A transit is similar to a transect line you use to monitor our beaches in our nearshore studies! This transit study will be conducted from April 19 to May 4, 2010. This project represents important and groundbreaking research for whale biologists, since very little is known about the distribution and vocal behavior (the sounds made by whales) of baleen whales in this part of the Pacific.

Our research mission has several objectives:

  • Collect data on the presence of whales/dolphins and their abundance (how many)
  • Collect tissue samples from whales/dolphins for genetic studies
  • Collect photo identification on any whales/dolphins observed
  • Collect acoustic (sound) data on whales/dolphins to help in species identification and understanding their vocalizations
  • Collect acoustic data on fisheries to understand the distribution of prey species along the transit line
  • Recover and install underwater acoustic monitoring equipment, called a HARP (High-frequency Acoustic Recording Package), near Wake Island that will remain there for a year.

The research team consists of 12 scientists who are trained in visual observations of cetaceans and acoustic monitoring. I am part of the research team, and will fill in for staff conducting the visual observations and routinely conduct the acoustic monitoring.

The visual observation team consists of eight biologists rotating between four stations: Two “big eye” (25 x 150) binocular stations, one on the port (left) side and one on the starboard (right) side; one station forward observing with the naked eye and 7X binoculars; and one station rear-facing looking behind the ship with naked eye and 7X binoculars. Scientists work on 2-hour shifts and rotate among the scientists.

Visual observation station on flying bridge.
Research team member Adam on a “Big Eye”.

The acoustic team monitors whale vocalizations using two different methods. One method uses a hydrophone array towed behind the ship 24 hours a day (mostly to monitor toothed cetaceans, including dolphins). This hydrophone array is similar to the ones installed at Seattle Aquarium, Neah Bay, and other locations to monitor orcas and other whales in Washington State.

The other acoustic monitoring method uses Navy surplus sonobuoys (which were originally developed to detect submarines) that are launched three times a day at 0900, 1300, and 1700. The sonobuoys have a wide range in frequency response. They are able to pick up sounds between 5 Hz (cycles per second) and 20,000 Hz. Although humans have a hearing range of about 20 Hz to 20 kHz (20,000 Hz), our hearing is most sensitive between the frequencies of 1 kHz (1000 Hz) and 10 kHz (10,000 Hz). So, we can hear some of the clicks, whistles, and ‘boings’ of some dolphins and whales (‘boings’ are made by minke whales), but we have to “visually hear” others that are too low for humans to hear. The vocalizations of some baleen whales are not audible to the human ear, but are detected by the sonobuoy and are visible on the computer with the use of special software. We visually monitor from a range of 10 Hz to 240 Hz, to detect the presence of baleen whales, while listening for higher frequency vocalizations. Signals picked up from the sonobuoys are transmitted to a radio receiver on the ship. All data, including measurements of a vocalization frequency range and duration are recorded on a computer program and also logged in a hand-written journal and rerecorded on an Excel spreadsheet. All data collected will be carefully analyzed in a lab at a later date.

So far on the research cruise, there has been very little cetacean activity observed by visual observers or the scientists conducting acoustic monitoring. These waters have not been widely surveyed for cetaceans, so any data will add to the collective knowledge base of this area. As a scientist, it is important to remember that “the absence of data is data” in understanding the presence/absence and abundance of cetacean species in these deep, low productivity ocean waters.

Personal Log

The Oscar Elton Sette received its sailing orders to leave at 1500 on Monday, April 19, 2010. The generator part we were waiting on finally arrived (by way of Japan!) and we set sail promptly at sailing time. I am finally getting used to using the 24-hour clock!

Sailing orders.
Leaving the dock at Guam.
Sette’s colors flying!

We left Guam with fairly calm seas, but the winds picked up and we were soon rockin’ and rollin’! We had our “Welcome Aboard” meeting, where we learned about ship protocols and safety, as well as getting to know some of the ship’s crew. Of course, a large part of sailing preparation is the “safety drill” and I had my first “close encounter” with a survival suit! The Safety officer, Mike promptly provided me with a survival suit that actually fits much better…the first one could have accommodated two of me!

Karen in survival suit made for 2 Karens.
…and out of the survival suit! Whew!

I was ill prepared for what was to come. With high seas, and no “sea legs” I was struck by seasickness, which sent me right to my bunk to sleep—in fact that was about all I could do! We are fortunate to have a wonderful Doc on board, who provided me with the right meds and advice to be able to recover and feel human again! The greatest comfort I’ve gotten in a long time was to know that “the survival rate for seasickness is 100%!”

Doc Tran who took care of all of the seasick scientists!
My bunk, where I spent most of two days recuperating!

New Term/Phrase/Word of the Day: sonobuoy

Question of the Day: Did you know that sonobuoys were first developed by the U.S. Navy, made to be dropped from aircraft, and designed to locate submarines during WWII?

Something to Think About:

Whales migrate to tropical waters to give birth in winter and spring, and travel to colder, food rich waters for feeding during the summer.

Animals Seen Today:

• Spotted dolphin (Stenella attenuata)

Did you know?

…that scientists take tissue biopsy samples from cetaceans by using a crossbow to shoot a special dart with a metal tip that penetrates the skin and blubber then pops out. The dart has a float and string attached to one end so that it can be retrieved easily with the tissue sample (about the size of a pencil eraser) still inside the tip. Whale research scientists have to be good archers! Don’t worry, the animals rarely notice when they are darted!

Richard Jones & Art Bangert, January 4, 2010

NOAA Teacher at Sea
Richard Jones
Onboard NOAA Ship KA‘IMIMOANA
January 4 – 22, 2010

Mission: Survey
Geographical Area: Hawaiian Islands
Date: January 4, 2010

The ship is underway
The ship is underway

Personal Log

Art and I arrived at Pearl at 7AM today at the Visitor Check-in and ID office. We were a half hour early and were still 12th and 13th in line. The process was pretty slow, but we got picked up by one of the science crew (James) when we got our passes around 8:15AM. We then went the ship and came on board durning the first of three drills for the day. Within in a few minutes of getting to the ship we were already involved in the ship board fire drill. Both Art and I were shlepping fire fighting equipment to the “fire scene”, I had a ventilation hose and Art a really big, and nasty looking, pry bar. It looked like a pry bar on steroids. After the fire drill it was the abandon ship drill, where we all put on our “gumby” suits ( I wish I had thought to have my camera ready first thing) and exchanged our old whistles for new ones without cork balls. After the abandon ship drill, it was man overboard and then we were able to stand down by about 10AM. Once the drills were done it was time to get with moving the equipment to the ship and setting up the instruments. The process of meeting the crew, loading the equipment and stores, and setting up the science stuff took until almost 6PM.

Robert Oddo, July 12, 2009

NOAA Teacher at Sea
Robert Oddo
Onboard NOAA Ship Ronald H. Brown 
July 11 – August 10, 2009 

Mission: PIRATA (Prediction and Research Moored Array in the Atlantic)
Geographical area of cruise: Tropical Atlantic
Date: July 12, 2009

Weather Data from the Bridge 
Air Temp 27.5o C(81.5F)
Relative Humidity 76.63
Sea Temp 28.22
Barometric Pressure 1015.15 inches
Latitude 11o42.80 North Longitude 56o 07.33 West
Traveling at 10.7 knots

Setting up the lab
Setting up the lab

Science and Technology Log 

There is a lot of unpacking and setup that has to be done on a scientific cruise like this one. Researchers were busy today getting schedules setup, equipment working and orienting themselves to their workspaces. We are now steaming directly to 0o, 23oW to service a buoy in the PIRATA backbone that has not been transmitting data since 21 June 2009.

Yesterday, I wrote about PIRATA (Prediction and Research Moored Array in the Atlantic). Another project that is also going on simultaneously is the Aerosol and Ocean Science Expedition (AEROSE).  Saharan dust storms are estimated to inject three billion metric tons of mineral aerosols a year into the troposphere. The aerosols impact precipitation, fertilize the ocean, and change the air quality and impact ecosystems in the Caribbean and the US eastern seaboard. Red tides, increased rates of asthma and changes in precipitation in the eastern Atlantic and Caribbean have been associated with this dust from the Sahara. The data collected from this cruise will help us understand better the impact of his Saharan dust on the Caribbean and the US eastern seaboard.

Here I am out on the back deck.
Here I am out on the back deck.

One must be prepared for emergencies at sea and today we had an abandon ship drill and a fire drill. There are 49 people aboard the Ronald H. Brown and it is important to know what do in case of an emergency and make sure everyone is accounted for.

Personal Log 

We got underway from Barbados yesterday afternoon and the seas were described as being a bit “lumpy”.  I noticed little by little people seemed to disappear and was wondering what was going on and then it hit me.  Nausea, cold sweats and not being to get comfortable at all.  I got real sleepy and found a spot in the library and crashed for a couple hours. There is really no place to go. I woke up around dinner, took some seasickness medicine and hung out for the rest of the evening. Believe me, I was not the only one trying to get their sea legs.  There were very few people around. It takes time for the body to adjust to the rocking of the boat and some adjust faster than others.  This morning, I feel much better.

The course we have taken since we departed from Bridgetown
The course we have taken since we departed from Bridgetown
Sunset from the back of the ship
Sunset from the back of the ship

Robert Oddo, July 11, 2009

NOAA Teacher at Sea
Robert Oddo
Onboard NOAA Ship Ronald H. Brown 
July 11 – August 10, 2009 

Mission: PIRATA (Prediction and Research Moored Array in the Atlantic)
Geographical area of cruise: Tropical Atlantic
Date: July 11, 2009

NOAA Ship Ronald H. Brown docked in Barbados
NOAA Ship Ronald H. Brown docked in Barbados

Weather Data from the Bridge 
Air Temperature 27.6o C (81.7o)
Relative Humidity 82.6%
Sea Surface Temperature 28.4oC (83.1oF)
Atmospheric Pressure 1014.8

Science and Technology Log 

The Prediction and Research Moored Array in the Atlantic (PIRATA) is project that is monitoring the upper ocean and near surface atmosphere of the Tropical Atlantic.  This is done by the deployment and maintenance of moored buoys and meteorological stations across the Atlantic. One of the purposes of this cruise is to do maintenance work on some of the buoys. The last couple of days have been spent loading equipment onto the ship and preparing the ship for this mission.

One of the science labs with equipment ready to be unpacked
One of the science labs with equipment ready to be unpacked

There is an incredible amount of preparation for a cruise such as this one. Scientific equipment must be packed carefully, shipped to the location where the ship is docked, and then unloaded and set up. If you forget something you might not be able to collect some of the data that you hoped to obtain. The data collected from this array of buoys will lead to a better understanding of an area of the Atlantic which is the main development region of tropical cyclones that threaten the United States.

Personal Log 

Arrived in Barbados late on the night of July 9th. Got to the R. H. Brown early on the morning on the 10th. Spent most of the day getting situated and meeting members of the scientific team as well as the crew.  Berths are small but comfortable.  I was surprised at all the amenities on the ship.  There is wireless Internet, a ship store, movies at 5:30pm and 7:30pm, laundry and even an exercise room with free weights, and elliptical and a treadmill. We attended an orientation session this morning regarding ship procedures, safety and general life onboard the R. H. Brown. 

Picture of my berth.  I have the top bunk.
Picture of my berth. I have the top bunk.
 Practicing getting in and out of immersion suits
Practicing getting in and out of immersion suits