NOAA Teacher At Sea Sherie Gee Aboard R/V Hugh R. Sharp June 26 — July 7
Mission: Sea Scallop Survey Geographical Area of Cruise: Northwest Atlantic Ocean Date: June 27, 2013
Weather Data from the Bridge: Latitude: 40 23:09 N
Longitude: 072:34.42 W
Relative Wind Speed: 11.4 Knots
Air Temperature: 23:50 degrees C
Humidity: 84%
Surface Seawater Temperature: 21.8354 degrees C
Surface-Sea water salinity: 31.1071 PSU
Science and Technology Log:
Two methods were used by these scientists to determine population numbers and trends. They can use the HabCam which stands for Habitat Mapping Camera System which takes pictures of the organisms on the bottom of the seafloor and they can use the dredge to collect specimens off the bottom of the seafloor to physically count. We started out using the Habcam which is a towed vehicle that has to be carefully lowered into the ocean by the skilled crew members. Since it is a towed vehicle, it must use a fiberoptic, winch-controlled wire to tow HabCam, and it is this wire that we pay in and out via the remote control winch box at the pilot station. It is very similar to the video games that I have seen the students play. The HabCam takes six pictures per second of the organisms on the ocean floor. The scientists can see these organisms being photographed on the computers. One computer is used to monitor the organisms and tabulate the number of several species. In the beginning, we counted scallops, fish, and convict worms. Then later we counted fish, skates and convict worms. On another computer, a scientist controls the HabCam with a remote control joy stick. The screen shows the bottom contours which is actually a side-scan sonar which pings out 50 meters to the left and right of the vehicle. The joy stick controlled the wire cable that the HabCam was hooked to. That is what raised and lowered the HabCam. Both shifts monitored and controlled the HabCam for about twenty hours and a total of 126 miles. I will describe and discuss the dredging process on the next blog.
The HabCam on DeckChad Flying the HabCamSara identifying and tabulating sea scallops, skates and convict wormsBrittle stars and a blenny on the seafloor
Organisms Seen: sea scallops
sand dollars
skates various fish
stingrays
Did You Know:
One nautical mile (nm) is equal to 1.2 miles.
The amount of data that the HabCam collected was about one terra bite.
Personal Log:
I really enjoyed maneuvering the HabCam; I can’t believe they actually trusted me to drive it. I am so impressed at all the technology that is involved in this type of research. I also enjoyed tabulating and identifying the various organisms on the floor. It goes by very quickly so you have to keep your eyes on the screen at all times or you will miss collecting the data.
Well, twelve hours has a new meaning for me. The time working actually went by fairly quickly but the sleeping twelve hours went by double time. There really is no down time because a person is either working the twelve hours or sleeping the twelve hours. The only time for some interaction amongst us is when we are in the dry lab waiting to rotate on the computers. I have enjoyed working with these other scientists and our chief scientist Nicole. They are all so knowledgeable, helpful and wonderful. They answered all the questions that I had for them.
NOAA Teacher at Sea Janet Nelson Huewe Aboard R/V Hugh R. Sharp June 13 – 25, 2012
Mission: Sea Scallop Survey Geographic Area: North Atlantic Wednesday, June 20, 2012
Weather Data from the Bridge: Latitude: 41.03.21 North
Longitude: 071 32.79 West
Air temp: 21 C
Wind Speed: 15.6 kt
Depth: 135.2 feet
Science and Technology Log:
I came on shift yesterday at noon with three back to back dredge tows (we have done 30 dredges thus far on Leg II). We are off the coast of Long Island. Most of the dredges around here have been filled with sand dollars and sea stars. In total, we have processed and counted on this leg of the survey 5, 366 scallops, 453 skates, and 58 Goosefish, a very interesting fish that buries itself in the sand and uses a filamentous lure to attract prey and engulf them. In addition, we have counted 132, 056 sea stars (wow!) and 590 crabs. The HabCam had some glitches yesterday but we began running the vehicle on our shift at approximately 1245 hrs. It made a run for approximately three hours and 57 minutes, with approximately 22.387 nautical miles of pictures before we dredged again.
While looking at the images of the HabCam, it astounds me at seeing prior dredge track marks from commercial scallopers and clamers. By looking at the side scan sonar, some of the dredges are very deep and very invasive. It reminds me of strip mining and clear cutting in terrestrial ecosystems. It is also evident, by observing the images, that little is left in those areas but shell hash. With that said, there are still some interesting species that get photographed, such as jelly fish and sea stars in patterns you would think they orchestrated.
We are working our way toward Georges Bank and will be there, from what I’m told, sometime late this afternoon or evening. All equipment is running well and what time we lost with the late departure has mostly been made up. It’s amazing what technology can do!
Personal Log:
As of yesterday, I have been away from home with little to no contact for six days, so when I was told yesterday morning prior to coming on shift that we had cell phone signal, I immediately went up on deck and called my husband! Although I only got an answering machine, it was good, and familiar, to hear his voice.
We then had a fire drill at noon and after that, set to work. It was nice to be outside working for the next 4 hours. I think I finally have my sea legs. However, the seas have also been cooperating with only 1-3 foot swells, at best. When they are higher, I sometimes feel like the Scarecrow in “The Wizard of Oz”. It’s a good thing I can laugh at myself when I look completely ridiculous while tripping through a door or, with no warning whatsoever, bump into a wall! From what I understand, this ship has a flatter bottom than most so every wave and swell catches it and tosses it in whatever direction that wave is going, despite having just gone in the opposite direction! I am hoping the sea remains calm when we get to Georges Bank.
I am learning a great deal about the critters that live in the ocean around here. It is so strange to have at times hundreds upon hundreds of sand dollars being pulled up in the dredge at one location and then to have mostly sea stars pulled up at another location. My favorite, however, are the hermit crabs! They are so cool! They will begin to crawl out of their shells, see you coming to pick them up and immediately crawl way back inside and stare at you. I actually think I saw one blink at me. Not really, but my imagination does run away at times.
Those are also the times someone, usually me or the watch chief (chief scientist is guilty of this too!), bursts into song or starts quoting a movie line, and then half the crew is joining in. I have gotten more proficient at using the technology equipment on board that does the recording of the measurements of the specimens, and also at cutting/shucking the scallops. Never thought I would know how to do that! I have a feeling there are a few things I never thought I would do before this cruise is over. I have five more days at sea. Anything is possible!
Side note: Today is beautiful for being at sea! Clear sky, moderate winds, and sea legs that are working!!
NOAA TEACHER AT SEA STEVEN WILKIE ONBOARD NOAA SHIP OREGON II JUNE 23 — JULY 4, 2011
Mission: Summer Groundfish Survey
Geographic Location: Northern Gulf of Mexico
Date: June 29, 2011
Ship Data
Latitude
28.06
Longitude
-96.43
Speed
8.40 kts
Course
89.00
Wind Speed
13.90 kts
Wind Dir.
71.56 º
Surf. Water Temp.
27.80 ºC
Surf. Water Sal.
24.88 PSU
Air Temperature
29.30 ºC
Relative Humidity
76.00 %
Barometric Pres.
1013.73 mb
Water Depth
26.00 m
Science and Technology Log
A preserved plankton sample from one of the Oregon II's bongo nets.
So now that we have an understanding of abiotic factors, let’s talk biotic factors, and for the most part, those biotic factors are going to be fish and plankton. The majority of our plankton (plankton are organisms–plants or animals–that are too small to fight against the current and thus drift along with it) samples come from the neuston and bongo nets. After we have our bongo or neuston nets back on board, the science crew goes to work preserving the specimens.
Something common in the neuston net, is Sargassum a type of brown algae belonging to the Kingdom Protista and the Phlyum phaeophyta (kingdoms and phylums are associated with the science of taxonomy or classification). If you are familiar with kelp, then you are familiar with brown algae. Kelp is a long algae that fastens itself to the bottom of the seafloor with a root of sorts called a holdfast. Sargassum, however, does not hold fast, but rather drifts out in the open ocean. It can stay afloat because Sargassum has little tiny gas-filled floats called pneumatocysts. These clumps of algae can provide much needed hiding places for small marine organisms out in the open ocean. Because so many organism might live in, on or around the mats of Sargassum whenever we capture Sargassumin our nets we have to be sure to wash them down thoroughly in order to ensure that we get as many of the creatures off of the blades as possible.
Sargassum, a brown algae, provides important habitat for many marine organisms including juvenile fish. Clearly visible are the pneumatocysts, gas-filled floats, that help keep the algae at the surface of the ocean.
The currents of the Gulf of Mexico and the Atlantic actually concentrate the Sargassum into a giant mass in the middle of the North Atlantic ocean, commonly referred to as the Sargasso Sea. So significant is the Sargassum, that Christopher Columbus feared for the safe passage of his ships because of the thick mass of algae.
The adventures of Captain Nemo as penned by Jules Verne in the late 19th century even commented on the nature of this floating mass of algae: “This second arm–it is rather a collar than an arm–surrounds with its circles of warm water that portion of the cold, quiet, immovable ocean called the Sargasso Sea, a perfect lake in the open Atlantic: it takes no less than three years for the great current to pass round it. Such was the region the Nautilus was now visiting, a perfect meadow, a close carpet of seaweed, fucus, and tropical berries, so thick and so compact that the stem of a vessel could hardly tear its way through it. And Captain Nemo, not wishing to entangle his screw in this herbaceous mass, kept some yards beneath the surface of the waves. The name Sargasso comes from the Spanish word “sargazzo” which signifies kelp.”
As interesting and important as Sargassum is to the ocean environment, it is not our targeted organism, which is, for the most part fish! Although not a fish, crustaceans are still an important fishery, and few are more significant than Panaeus aztecus (brown shrimp), Panaeus setiferus (white shrimp) and Panaeus duorarum (pink shrimp). Chances are if you are dining on shrimp cocktail you are eating one of these three species.
One of many (so many) brown shrimp to be measured. We measure from the length of the rostrum (the point part by their eyes) to the tip of their (tail).
Lutjanus campiechanus (or the red snapper) is another commercially important species that scientists are particularly interested in. Species like the red snapper are of particular concern because, according to NOAA’s Fish Watch website, the population is currently at low levels prompting NOAA to establish temporary restrictions on fishing this species in past years.
It is the work of the crew aboard the Oregon II to collect the data that helps scientists predict population trends in species such as these which allows government regulations to be based on sound science. Although sometimes unpopular with the local fishing industry the temporary ban on fishing for some species is aimed at providing a long-term sustainable population for future generations.
Prized by the fishing industry and restauranteurs, red snapper are a species of particular concern because of the pressures local fisheries have placed on the species.
Although not a primary target of this fish survey, cartilaginous fish (Class Chondricthyes…there’s that taxonomy again) like sharks, rays and skates are also organisms of particular concern. Unlike the majority of the fish we bring on board, which are bony fish belonging to the Class Osteicthyes, the majority of cartilaginous fish reproduce internally. This means that a female shark, ray or skate, might have much fewer offspring in a given year, but those offspring might be more mature once they are born. Bony fish on the other hand often lay eggs externally by the thousands, but only a small percentage survive.
The watch leader of my watch, Brittany Palm, realizes the significance of the reproductive habits of these organisms (follow this link to review Brittany and her fellow authors extensive work) and has used much of her expertise gained through NOAA cruises like this one to publish scientific papers in peer-reviewed journals.
If you recall, one of the steps of the “scientific method” is to share your results, and there is no better way than to publish your findings in journals for other scientists to read. Although writing a paper may sound simple, this is not your average high school term paper–there is considerably more effort required. Brittany and her fellow authors labored for close to four years to finally draft and submit the paper for publishing.
An example of a cartilaginous fish, the Atlantic angelshark (Squatina dumeril) was brought on board as part of one of our trawls.
Although we may not write anything as extensive at the high school level, good sound scientific investigations will always end up with you sharing your results, and as a result, well-researched background information is always essential. To all my past and future students out there, feel free to take note of the reference section of the paper and remember how important references and good research is in backing up your work!
Personal Log
It has not taken long to get into the rhythm of things aboard ship. Although I thought that the waves might lead to a little sea sickness, I now find them quite soothing, and am curious as to how I might feel once back on shore as I struggle to get my land legs back. Sleeping with the waves is a slightly different story. At times they can lull you off to sleep (or it might simply be the twelve hours of sorting, measuring and weighing the catch that does that); other times they can roll you right into your bunk wall and snap you awake. My bunk is on the top, so the wall is better than the floor I suppose!
Although the waves have been soothing up to this point, we are possibly facing some inclement weather as the first tropical storm of the season, Arlene, is to our southwest heading towards the Mexican coast. If the weather picks up too much we may have to head in shore to work up some of the shallower stations while the Gulf settles back down. Either way we will be kept busy, measuring fish or measuring the waves!
Tropical Storm Arlene, the first tropical storm of the Atlantic season is headed for the Mexico coast in the next few days.
NOAA Teacher at Sea: Bruce Taterka NOAA Ship: Oregon II
Mission: SEAMAP Summer Groundfish Survey Geographical Area of Cruise: Gulf of Mexico Date: Thursday, July 8, 2010
Sexing the Catch
Weather Data from the Bridge
Time: 1630 (4:30 pm) Position: Latitude = 28.20.93 N; Longitude = 095.58.98 W Present Weather: Could cover 100% Visibility: 4-6 nautical miles Wind Speed: 18 knots Wave Height: 6-8 feet Sea Water Temp: 28.9 C Air Temperature: Dry bulb = 27.2 C; Wet bulb = 25.3 C Barometric Pressure: 1011.56 mb
Science and Technology Log
As you can tell from our previous blogs, we spend a lot of our time on the Oregon II counting, measuring and weighing our catch and loading the data into FSCS. These data are critical to NOAA and the states in managing fish stocks and the Gulf ecosystem. In addition to knowing population size, weights, and lengths of individuals it’s also important to know the sex of the organisms. Information on the male:female ratio helps NOAA and the states assess the ability of the population to reproduce, and to establish sustainable catch levels for commercial fishing.
But how do you determine the sex of marine organisms? For most fish and invertebrates you can only tell the sex by internal anatomy, which almost always requires cutting the animal open. This is time consuming and not always practical when we have a large catch to process and other tasks take priority, such as preparing samples to be analyzed for contamination from the oil spill which is our top priority right now.
For some organisms, however, sex can be determined externally. One of the things we’ve learned in the past week is how to determine the sex of shrimp, flatfish, crabs, sharks, skates and rays. Here’s how:
Shrimp: the males have a pair of claspers (called petasma) on their first set of legs.The petasma are absent in females. The males use the petasma during mating to grasp the female and transfer the sperm sac.
Male – arrows show the petasmaFemale – petasma are absent
Crabs: On most crab species females have wide plates curving around the rear of the abdomen, while males have a long narrow plate or plates. On females, the eggs develop under the curved plate.
MaleFemaleFemale with eggs
Flatfish: When you hold a flatfish up to the light you can see through it, which enables you to do an internal examination without cutting it open. On female flatfish, the gonad extends in a dark red, curved wedge which is absent in the male.
Female showing long curved gonadMale – long gonad is absent
Sharks, skates and rays. Males have external claspers that they use in mating, while in females the cloaca is smooth and claspers are absent.
Male Angel shark – arrows point to claspersFemale Angel shark – claspers are absent
Personal Log
A tropical depression moved through the Gulf yesterday evening, making it too rough and windy to fish. So instead of counting, measuring and loading data into FSCS, my watchmates and I cleaned the lab, secured our gear, and headed up to the lounge to watch Shutter Island on the large-screen TV. Last night my bunk was like a roller coaster, tossing me from side-to-side and head-to-toe as the ship rolled and pitched in the big swells. Today has been a slow day for the scientists on board, waiting for the storm to pass so we can start trawling again, while the crew and officers remain as busy as ever.
NOAA Teacher at Sea
Anne Byford
Aboard R/V Hugh R. Sharp
June 8 – 15, 2010
Mission: Sea Scallop Survey Geographic Location: off the coast of New England June 8, 2010
Weather Data at 6pm EDT: Calm, Clear, 23˚C Location at 6pm EDT: Lat: 39 42.68 N Long: 73 24.98 W Water Depth: 86.4m
First day at sea
The first day was mostly spent steaming to the first dredge site, about 14 hours away from Lewes, Delaware. In the morning, all of the safety information was covered and those of us who had not tried an exposure suit before put one on. After the ship reached the ocean, we did a test dredge to ensure that all of the equipment was working and that we all knew what to expect.
The process is basically the same for all dredges on the Sea Scallop survey. Each tow is at a specific, pre-selected random site, using the same type of dredge, at the same angle to the bottom for the same amount of time and at the same speed as all other tows. This ensures that the data gathered is comparable from tow to tow and particularly from year to year. Once the dredge is pulled back up, it is dumped onto a sorting table on the rear deck of the ship. Everything is sorted into 4 categories: scallops, fish and squid, sea habitat (which is anything that is not scallops or finfish), human trash. Once the initial sorting is done, the sea habitat is counted by the bucket-load and dumped back into the ocean; the fish are sorted by species and weighed and counted. Some species (skates, flounder/flukes, and goosefish, also called monkfish) are also measured for length. Scallops are weighed, counted and measured. Some specific samples may be kept for researchers on shore and the rest is thrown back. Human trash is kept aboard for proper disposal later. After all of the sorting and measuring is finished, the buckets are rinsed and stacked for the next dredge, which isn’t usually that long in coming.
Sorting
Fortunately, we are not measuring things with a tape measure or having to manually input lengths into the computer. The ship has 3 “fish boards” that are electronic magnetic measuring devices that automatically send the data to the shipboard computers. Operators choose the species of fish being measured and then each fish is put on the board and a magnetic wand is used to mark the end of the tail of the fish. Each length is sent to the computer and stored. Historically, the data was collected on paper and the lists sent to a prison to be hand entered into a database. The database then had to be proofread and corrected if necessary. While the data still must be audited, it is much faster and easier, and less prone to error, to take the hand written stage of data collection out of the process.
Fish Board
Species Seen:
At the dock in Lewes: Osprey pair and at least one chick in the nest, Sea gulls
At sea: Pod of dolphins playing in the ship’s wake, jellyfish, pelicans
In the dredge: Squid, gulfstream flounder, windowpane flounder, summer flounder, spotted hake, sea robins, small skates, clearnose skates, several kinds of crabs (spider and rock), moon snails, sea stars, sand dollars, whelks, sea urchins, scallops, sea mice (polycheate worms)
Personal log:
We couldn’t have asked for better weather, clear and calm. After the safety meeting and test dredge, there was a great deal of down time until we reached the first site at about 10pm. I am on the day watch from noon to midnight and so got to sort the first real dredge. We did find scallops, ranging from about 1 inch across to about 5 inches across, but we found more sand dollars. After spending countless hours walking beaches to find even a few sand dollars, it was amazing to see hundreds or thousands on the sorting table to be tossed back as sea trash. I also discovered that you can easily loose track of time simply sitting in the sun on the deck watching the world go by.
