Donna Knutson: Atlantic Sea Scallop Research Progressed into Habitat Modeling, June 13, 2016

NOAA Teacher at Sea Donna Knutson
Aboard R/V Hugh R. Sharp
June 8 – June 24, 2016

 

2016 Mission: Atlantic Scallop/Benthic Habitat Survey
Geographical Area of Cruise: Northeastern U.S. Atlantic Coast
Date: June 13, 2016

Mission and Geographical Area:  

The University of Delaware’s ship, R/V Sharp, is on a NOAA mission to assess the abundance and age distribution of the Atlantic Sea Scallop along the Eastern U.S. coast from Mid Atlantic Bight to Georges Bank.  NOAA does this survey in accordance with Magnuson Stevens Act requirements.

Science and Technology:

Weather Data from the BridgeTas habcam 055 (4) color

Latitude:  40 43.583 N
Longitude:  67 04.072 W
Clouds:
50% cumulous
Visibility
: 6 nautical miles
Wind: 296 degrees 11 knots at cruise speed of 6.5 knots
Wave Height: 1-3 ft.
Water Temperature:  52 ºF
Air Temperature:  56 ºF
Sea Level Pressure:  29.4 in of Hg
Water Depth: 107 m

Scientific Blog

During the 1970’s fishermen made the observation that the Atlantic sea scallop was becoming hard to find.  Overfishing had depleted the numbers and they were not repopulating at a steady rate.  In the early 1980’s after noticing that nature wasn’t going to be able to keep up with man’s demands of the scallop, programs were set up to monitor the scallop fishing industry and to also set catch limits.

Live video from rear sonar devices
Live video from rear sonar devices

In 1997 NOAA and the New England Fishery Management Council determined that the Atlantic sea scallops were still being overfished and by 1998 a new plan for allowing the scallop to increase their numbers was implemented.

The guidelines for fishermen proved to be useful and the scallop industry had great success.  It was reported that the scallop biomass harvested had increased eighteen times higher than the previous level between 1994 – 2005.

The demand for the Atlantic sea scallop did not decrease.   The sea scallop adductor muscle, the muscle that holds the two shells together and allows the animal to open and close the two shells, is harvested for food.  The muscle is typically 30 – 40 mm in diameter in adult sea scallops.  The demand for this tasty muscle has made the Atlantic sea scallop fishing industry into a very powerful and prosperous billion-dollar industry.

Live forward sonar scanner
Live forward sonar scanner

Fisherman will agree that science is essential to the health of their industry.  It was determined that rotational management was needed for the scallops to replenish, much like crop rotation on land.  After a period of time, areas need to rest without any activity and other areas can be reopened to scallop fishing after a period of time.

 

What that time period for rest is and what areas need to rest while other areas are opened to fishing is the science behind the industry.  The industry recognizes that the science is essential to keep a healthy population of Atlantic sea scallops and, through a special research set-aside program, invests 25% of the scallops to research.  The market value of the scallop, usually $10 -$14 per pound, determines the funding scientists can invest into research.

Resource management is not a new idea.  Resources are managed at all levels whether they are animals such as scallops or deer, minerals or elements mined such as aluminum or coal, or even plants such as trees. Without management practices in place, there is a good possibility of endangering the resource for later use, and in the case of living animals, endanger their future viability.

RSCN7757
Dr. Scott Gallager

Some of the “Research Set-Aside” monies given by the commercial fisherman have allowed the development of a special habitat mapping camera, affectionately called the HabCam.  Dr. Scott Gallager has combined his two areas of expertise, biology and electronics and developed a series of cameras used for studying underwater habitats.  NOAA has contracted Dr. Gallager to oversee the HabCam during the annual sea scallop survey.

While the original HabCam is being used by the commercial fishing industry on scallop vessels, a fourth generation HabCam is used by NOAA on the R/V Sharp to help with the annual Atlantic scallop survey.  It has two sonar devices, one forward and one rear sonar scans a 50 meter swath on each side of the vehicle. It is equipped with four strobe lights that allow two cameras to take photographs.  Each camera takes six pictures a second.  The HabCam has a sensor called the CTD (Conductivity, Temperature, Depth) to measure physical properties such as salinity, temperature, depth, and dissolved oxygen.  Two other sensors are used to measure turbidity, and a device that measures the scattering and absorption of light at that depth.  Measuring absorption allows the computer to make color corrections on the pictures so the true colors of the habitat are seen.  The vehicle is 3700 lbs. and made of stainless steel.  It is actually towed through the water but is “driven” by using the metal jacketed fiber-optic tow cable which pulls it through the water.  The HabCam relays the real-time images and data directly to the ship where it is processed by computers and also people monitoring the pictures. Computer Vision and Image Processing tools are also being developed to count and size scallops automatically from the images as the vehicle is being towed. This will allow managers in the future to use adaptive sampling approaches whereby the sampling track is actually changed as the vehicle is towed to optimize the survey.

HabCam on Right Side
HabCam on Right Side

By analyzing the data from the HabCam and doing dredges over mapped areas of the ocean, scientists can relay their findings to fisherman with suggestions on the best places to harvest Atlantic sea scallops.  It is important to keep in mind the other animals in the area that may be affected by scallop fishing.  The Yellowtail flounder is one such animals that could be better monitored with the aid of the HabCam.  The flounder often is found living in areas that have a high density of sea scallops, but by identifying areas of high scallop and low yellowtail densities, fishermen may be better able to avoid yellowtail bycatch.  Unfortunately, many bycatch fish do not survive the dredging and are often dead upon being returned to the sea.

While scallops and fish are certainly important to the commercial fishing industry, understanding the habitat that supports these organisms is paramount to their effective management. HabCam collects images that contain a huge amount of information on habitat factors such as temperature, salinity, chlorophyll, seafloor roughness, and substrate type (mud, sand, gravel, shells, boulders, etc). Habitat for one organism is not necessarily the same for the next so we need to put together maps of where certain habitats allow each species to exist and where they co-exist to form communities. Understanding this, we can simulate how communities will respond to climate change and other changing environmental factors such as Ocean Acidification (i.e., low ph), which all contribute to habitat.

Dr, Gallager worling on the HabCam
Dr. Gallager working on the HabCam

Because of the success of the HabCam and other habitat monitoring/mapping devices, HabCams I – VI have been built.  There are four different vehicles used now for specialized data collection depending on what the survey priorities are.

HabCam is a unique, and high-end technology, but at the same time is being upgraded to provide habitat data on a variety of sampling platforms such as high speed torpedo-like systems that are towed at 10 kts or greater and on robotic Autonomous Underwater Vehicles (AUV) that will carry the stereo cameras and sonar systems currently on HabCam. The combination of robotics with underwater sampling provides a window into the ocean universe that humans have not been able to effectively explore and sample because of the great pressure and low temperature of the deep sea. Abyssal habitat (deeper than 3000m) is very difficult to sample and more and more oceanographers are looking to develop and use robots to get to where observations and samples need to be taken.

Monitoring the screens for obstacles

While the HabCam was initially developed for the scallop fishing industry, it has clearly made an invaluable contribution to the study of habitats that have so long been inaccessible to us.  There are many cameras throughout the world used to take pictures of the ocean bottom and even animals therein, but the HabCam series that was developed out of Woods Hole Oceanographic Institution (WHOI) is integrating many different data types to develop a more comprehensive understanding of fauna and flora (animals and plants) in their habitats worldwide.  It is an exciting time for oceanic research!

Driving the HabCam
Driving the HabCam

Sources:

National Marine Fisheries Services (www.nmfo.noaa.gov)

Dr. Scott Gallager PhD, tenured Associate Scientist, Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA, Visiting Professor, Okinawa Institute of Science and Technology, Okinawa, Japan.

 

Personal Blog:

I am feeling great and meeting so many fascinating people!  Dr. Gallager, or Scott to the scientists on board, has taught me so much in the very short time I’ve been on the ship.  He has many great stories as he has been involved in oceanic research for many years.  He was asked to study the teak wood that the Titanic was made of because “Bob” Ballard saw so little of it even though all the decks and ornamentations were made of it.  So Bob asked Scott to study it and Scott wrote a paper on the polychaete worm that was able to break down the tough cellulose tissue.

After our dredging yesterday resulted in many scallops, you will never guess what we are having for our 12:00 p.m. meal.  I said 12:00 p.m. meal because for some of us it is breakfast and for others it is supper.

Dogfish on the bottom of the ocean, Picture taken by the Habcam.
Dogfish on the bottom of the ocean, Picture taken by the Habcam.

Me and the other five scientists are now done with our 12 hour shift and the new group just took over. We were running the HabCam all day and then looking at random still photos from the HabCam to identify the life forms that are present.  Dr. Gallager is working on a computer image recognizing HabCam, but he feels it is important to have humans involved as well.   I am so thankful I am on the same crew as Dr. Gallager.  I am actually getting better with the whole time schedule shock.  Not really a big deal once you try it.  (Like most things in life.)

Skate on the bottom of the ocean. Picture taken by the HaabCam.
Skate on the bottom of the ocean. Picture taken by the HabCam.

 

 

 

 

 

 

Steven Frantz: Critters at Sea, August 5, 2012

NOAA Teacher at Sea
Steven Frantz
Onboard NOAA Ship Oregon II
July 27 – August 8, 2012

Mission: Longline Shark Survey
Geographic area of cruise: Gulf of Mexico and Atlantic off the coast of Florida
Date: August 5, 2012

Weather Data From the Bridge:
Air Temperature (degrees C): 29.0
Wind Speed (knots): 10.28
Wind Direction (degree): 138.68
Relative Humidity (percent): 076
Barometric Pressure (millibars): 1022.33
Water Depth (meters): 28.45
Salinity (PSU): 35.612

Location Data:
Latitude: 3323.40N
Longitude: 07808.17W

Critters at Sea

On my last blog I introduced you to five species of shark found so far. I think you can tell which one is my favorite, which is yours?

Even though our mission is to collect data on sharks, you never know what might come up on the end of a hook (or tangled in the line!). Data is still collected on just about everything else we catch. For today’s blog I have put together a photo journey on the so many other beautiful creatures we have caught.

Basket Starfish
Basket Starfish with pieces of soft red coral
Black Sea Bass
Black Sea Bass
Blue Line Tile Fish (Unfortunately damaged by a shark)
Blue Line Tile Fish (Unfortunately damaged by a shark)
Box Crab
Box Crab
Clearnose Skate
Clearnose Skate
Conger Eel
Conger Eel
Red Grouper
Red Grouper
Mermaid's Purse (egg case from a skate or ray)
Mermaid’s Purse (egg case from a skate or ray)
Candling the Mermaid's Purse reveals the tail and yolk of the animal
Candling the Mermaid’s Purse reveals the tail and yolk of the animal
Hammerjack
Amberjack
Scallop Shell
Scallop Shell
Scomberus japonicus (Can you come up with a common name?)
Scomberus japonicus (Can you come up with a common name?)
Sea Urchin
Sea Urchin
Spider Crab
Spider Crab
Starfish
Starfish
Red Snapper (10Kg)
Red Snapper (10Kg)

There you have it. I hope you enjoy the pictures of just some of the beauty and diversity in the Atlantic Ocean. Be sure to visit my next blog when we tie up loose ends!

Sunset
Sunset

Alicia Gillean: Visiting the Bridge and Dredging Overload, July 5, 2012

NOAA Teacher at Sea
Alicia Gillean
Aboard R/V Hugh R. Sharp
June 27 – July 7, 2012

Mission: Sea Scallop Survey
Geographical area of cruise: North Atlantic; Georges Bank
Date: Thursday, July 5, 2012

Weather Data from the Bridge*
*This data is for July 6, 2012. I was so busy dredging on the 5th that I forgot to record the weather data*

Latitude: 41 49.09 N
Longitude: 69 52.77 W
Relative Wind Speed: 11 Knots
Air Temperature: 21 degrees Celsius
Humidity: 82%
Surface Seawater Temperature: 20 degrees Celsius

Science and Technology Log

Wednesday, July 4: Visiting the Bridge and Flying HabCam

Wednesday was a lazy day on the ship. To make up some lost time and to hit as many dredge and HabCam stations as possible, there were a few long “steams” during my shift today. The ship can’t go full speed when pulling the dredge or the HabCam, so in order to go full speed, the ship “steams” with no scientific tools in the water until it reaches its next destination. We had about five hours of “steam” time today and the rest of the day was spent with HabCam, so I didn’t smell like sea scallops at the end of my shift, but I still prefer the more active days.

Bridge
Some of the ship’s controls on the Bridge

I used some of my spare time to go visit the Bridge. Remember, this is where the Captain, engineer, and mates keep the ship moving on the right course and keep everything operating smoothly. Since it was rainy outside, the big windows in the Bridge were a nice substitute to the deck where I usually like to spend my free time. Mary, one of the mates, was on duty. She has been working on boats for more than 20 years and has been on the Hugh R. Sharp for four years. She was kind enough to give me an overview of the function of each of the seemingly limitless computers and buttons that she and the engineer use to do their jobs. I was surprised by how computerized everything is, from steering, to navigation, to monitoring the water and fuel of the ship. There are duplicates of many of the computer systems, in case something doesn’t work and non-technical ways to navigate the ship too, like paper copies of nautical charts.

Alicia fly HabCam
Alicia flying the HabCam

While flying the HabCam Wednesday, I was struck by the amazing camouflage of some of the creatures that live on the ocean floor, like monkfish, flounder, and skates. If you don’t know what you are looking for or if you blink at the wrong moment, they are very easy to miss. It’s neat to see these adaptations in action! I’m glad that I got to experience this science tool in its early stages and appreciate the relationships that the HabCam allows you to see between different animals and how the animals live on the ocean floor that you can’t tell from a dredge haul.

Thursday, July 5: Dredging Overload and the Scoop on Scallops

Since Wednesday was lazy, Thursday was insanely busy! We made it through nine dredge stations during the day shift and one haul was so large that we had almost 6,000 scallops (not to mention all the rocks, fish, sea stars, crabs, etc.). Everyone worked together to get this giant haul sorted and processed. Mary even came down from the Bridge to help! When a haul is this large, we don’t measure and weigh every scallop. Instead, we count the total number of baskets (about the size of a laundry basket) of sea scallops and randomly select two baskets to measure and weigh. The number and average length of the overall scallop haul is calculated based on this subsample. There’s lots of math involved in this process!

Alicia measure scallop
Alicia measuring scallops

We dredged in an area with lots of big rocks and boulders today, so the crew added rock chains to the dredge to help keep the giant boulders out of the dredge. It doesn’t come close to keeping out all the rocks, though! They also added what looks like a metal slide that goes from the side of the sorting table to the edge of the deck to help get the giant rocks off of the table and back into the ocean. I’m constantly amazed at how the scientists and crew seem to anticipate and have a plan for every possible obstacle we might run up against. I expect that is the result of lots of years of experience and very careful planning.

Scallop Gonad
The scallop with pink is female. The other is male.

I mentioned in a previous post that we weigh about 5 scallops from each tow individually and also weigh the meat and the gonad (reproductive organ) of these five scallops individually. As soon as you cut a scallop open, you can tell if it is a male or female by the color of the gonad. Males are white and females are red or pink, as you can see in this picture. Another interesting tidbit about sea scallops is that they have lots of simple eyes that allow them to see shadows and light. You can see a fascinating close-up of sea scallop eyes by clicking here and can learn more about the anatomy of a sea scallop by clicking here.

Since this is a sea scallop survey, I’ve spent quite a bit of time with sea scallops, but I’m still not very skilled at cutting sea scallops to remove the meat quickly. One of the ladies on my watch can shuck about twenty for every one I shuck! She’s offered me lots of pointers, but I’m not going to win a scallop cutting contest any time soon. When we finish sorting and processing each haul, we usually remove the meat from the scallops, wash it, bag it, and put it in a freezer. It can seem like the work is never done when there’s a big haul!

Personal Log

The 4th of July at sea was business as usual; no firework or backyard cookouts for me this year. However, we did make a cake and sing happy birthday for the youngest member of the science group’s 20th birthday.

Since we didn’t do any dredging or anything active on Wednesday, I felt like I needed to run laps around the ship after my shift ended. I settled on trying the stationary bike instead. Riding a stationary bike on a ship that is rocking and swaying means that the bike isn’t really all that stationary! I think I got a nice abdominal workout from trying to keep myself balanced. It felt good to move, though.

Fire Drill
Engineer during fire drill at sea

On Thursday, we had a fire drill. The Captain was nice enough to schedule it at 12:15 pm, just as one shift was ending and one was beginning, so that people would not be in bed or in the shower when the drill began. During the fire drill, an alarm sounded and the Captain came on the intercom to tell us that it was a fire drill and that all scientists should muster (gather) in their designated spot. All of the scientists met in the dry lab with a life jacket where the chief scientist counted us and reported back to the Captain that we were all accounted for. We waited while the crew finished its part of the drill, then went back to work (or bed, for the night shift). I felt kind of like a student in a fire drill at school!

As I look around the ship, I find it interesting how things are designed for life at sea, like the hooks at the top of every door. If you want a door to stay open, you need to hook it, otherwise the rocking of the door will slam it closed. The table in the galley has about a half inch lip around the edge of it and the drawers of the pantry need to be opened in a special way, because they don’t just slide open. Thanks to these details, you don’t really hear things sliding and crashing around like you might imagine you would when the ship is rocking.

I’m grateful that I have been able to participate in the NOAA Teacher at Sea Program as a part of the science crew. I have worked hard, learned a ton, and can’t wait to share my learning and experiences with my students! However, I miss my family, so I’m glad that we’re headed back toward land soon!

Sunset
Sunset at sea

Alicia Gillean: Strange Ocean Critters and Science at Sea, July 3, 2012

NOAA Teacher at Sea
Alicia Gillean
Aboard R/V Hugh R. Sharp
June 27 – July 7, 2012

 

Mission:  Sea Scallop Survey
Geographical area of cruise: North Atlantic; Georges Bank
Date: Tuesday, July 3, 2012

Weather Data from the Bridge
Latitude: 41 13.20 N
Longitude: 066 35.21 W
Relative Wind Speed: 2.3 Knots
Air Temperature: 18.72 degrees C
Humidity: 78%
Surface Seawater Temperature: 15 degrees C

Science and Technology Log

The HabCam-ing and dredging continue here in the North Atlantic in calm seas and clear skies!

Alicia Star Oddi
Alicia installing sensor on dredge

I learned a new part of the data collection process with the dredge.  Each time the dredge goes out, a sensor that tracks the pitch and roll (side to side and up and down movement) of the dredge on the ocean floor needs to be installed on the dredge.  When the trawl is complete, the sensor is removed and the data is uploaded to the computer.  It is automatically plotted on a line graph that visually tells the story of the dredge’s movement on the ocean floor.  This data is eventually combined with all the other data gathered at each dredge station.  Installing and removing the sensor has been my job for the last couple of shifts.  To do this, I have to climb up on the sorting table when the dredge is first brought to the surface, remove a metal pin and plastic holder that keeps the sensor in place, remove the old sensor and add a new sensor, then reinstall the holder and pin.  This all happens before they dump the dredge. On a funny note, on my way to the sorting table to add the sensor to the dredge earlier today, I managed to trip on a hose that was on deck and turn it on, watering myself and the lab technician that was on the deck with me and entertaining everyone else watching, I’m sure!  Luckily, we were all wearing our foul weather gear, so no one was soaked!!

It’s interesting to experience all the different pieces that make a successful dredge tow.  Before coming to sea, I guess I just assumed that you lowered a big net to the ocean floor and hoped to catch something.  I had no concept of how methodical and detailed each deployment of the dredge really is, from the locations, to the timing, to the number of people involved, to the detailed data collection.  The process is still being refined, even on this third leg of the sea scallop survey.  One of the scientists on my watch is an engineer who helped design and build the latest version of HabCam.  When a part that holds the sensor in the dredge was not working correctly, he was asked to use his engineering skills to create a better way to hold the sensor, so he made the needed modifications right on the ship.

Sorting
Day shift starting to sort a dredge haul

While sorting the haul from dredging stations, I sometimes run across ocean critters that I’ve never seen before.  I usually set these to the side to snap a picture after we finish sorting and to ask a scientist, usually Karen or Sean, to identify it for me.  It turns out that the strange hairy, oval-shaped creature I keep running across is a type of worm called a sea mouse. In my pictures it looks like a grassy ball of mud, but it’s much more interesting in person, I promise!  I consulted a field guide in the dry lab to learn a little more about it.  Its scientific name is Aphrodita hastate and it is usually about 6 inches by 3 inches and can be green, gold, or brown.  There are 15 gills hidden under the bristly fur.  They like muddy areas and often live in the very deep parts of the ocean, so they are only seen when brought up with a dredge or after being tossed ashore in a storm.  I haven’t seen any of them in the HabCam images, so I’m wondering if they tend to burrow in the mud, if their camouflage skills are really impressive, or if we just haven’t flown over any. The HabCam moves so quickly (remember, it takes 6 pictures per second) that it’s impossible to see everything in enough time to figure out what it is.

 

Sea mouse
Belly of a sea mouse

Another item that keeps coming up in the dredge looks like a clump of pasta shells and cheese and it crumbles easily.  My initial guess was that it is some type of sponge, but I was wrong. It turns out these are moon snail egg cases. Once I’m back ashore, I think I’ll have to find out more about these.

moon snail eggs
Moon snail eggs

We’ve seen lots of sea stars, scallops, sand dollars, crabs, clams, hermit crabs, flounder, several species of fish called hake, and skates (relative of the stingray) in the dredge hauls.  We’ve also seen most of these on the ocean floor with the HabCam.  One of the scientists found a whale vertebrae (part of the backbone) while sorting. It’s at least a foot and a half wide and 8 inches high! Can you imagine the size of the whale when it was alive?  Each haul usually has a monkfish or two in it.  I’ve heard that these fish are pretty tasty, but they sure look mean!  I was warned early on to keep my hands away from their mouths unless I want to get bitten!

 

Alicia with monkfish
Alicia with monkfish

Today is supposed to be a day of mainly flying the HabCam, so I’m hoping to be able to interview a few people on the ship about their jobs for use back at school when I’m not flying the HabCam or co-piloting.

Sea stars
Pretty sea stars that came up in the dredge

Personal Log

I ate my first real meal in the galley tonight and it was pretty tasty!  The steward, Paul, has worked on this ship for eight years and seems to have cooking a sea down to a science.  He has to work and sleep some unusual hours to keep everyone aboard well-fed, but he does it with a smile on his face.  Between the meals, snacks, and limited space to exercise, I imagine that keeping fit while at sea for long periods of time can be a challenge. There is a stationary bike next to the washer and dryer, but other than that you have to be creative with getting your exercise.  I saw one crew member on the deck this morning with a yoga mat doing crunches and using a storage container to do tricep dips.  He said that it’s a challenge, but that you can find ways to keep in shape at sea if it’s a priority for you.

I actually slept better the first few days at sea when I was seasick than I do now that I’m feeling better, thanks to the anti-nausea medication, I expect.  I’ve found that earplugs are essential for catching sleep aboard the ship when I’m not medicated!  There is one washer and dryer aboard the ship and I’ve had a bit of trouble finding a time when it’s not in use, so I decided to do my laundry at 5 am a day or so ago when I was having trouble sleeping. I figured I may as well use insomnia to my advantage and it was so nice to use a towel that is finally completely dry for the first time in a week!

There are 22 people aboard this ship; 12 scientists and 10 crew members.   Four of the scientists and two of the crew are women.  Because of watch schedules, most of the time I see only two other women while I’m awake.  All that to say, the ship is a pretty male-dominated arena, with lots of ESPN, toilet seats left up, and guy humor.  I feel very welcome aboard the ship, but I find that I spend most of my down time doing my own thing, like working on this blog or just enjoying the view, since I’m not much of a movie or sports watcher.  With fabulous views of the Atlantic Ocean and beautiful weather, this doesn’t bother me a bit!  In fact, I find that I see the most animals swimming in the ocean during these down times.  Today it was a huge group of jellyfish swimming next to the ship!

I’m still enjoying my time at sea and am looking forward to learning even more in my last few days.

View from science lab
View from the science lab at night

Alicia Gillean: Adventures in Dredging; July 1, 2012

NOAA Teacher at Sea
Alicia Gillean
Aboard R/V Hugh R. Sharp
June 27 – July 7, 2012

 

Mission:  Sea Scallop Survey
Geographical area of cruise: North Atlantic; Georges Bank
Date: Sunday, July 1, 2012

Weather Data from the Bridge
Latitude: 40 48.43 N
Longitude: 068 04.06W
Relative Wind Speed: 8.9 Knots
Air Temperature: 17.61 degrees C
Humidity: 92%
Surface Seawater Temperature: 16 degrees C

Science and Technology Log

Dump dredge
Dumping dredge onto sorting table

My last shifts have been a mix of HabCam work and dredging. Remember, dredging is when we drag a heavy-duty net along the ocean floor for fifteen minutes, then bring it up and record what ocean critters we catch.  Dredging involves a lot more physical work and is much dirtier than flying the HabCam, so time goes much faster when we are dredging and it’s exciting to see what we will catch.  However, it is also kind of sad to see all the animals we bring up in the dredge, because most of them are dead or will soon be dead.  You can watch a video about sea scallop dredging here and here.

There are three two-week legs to this sea scallop survey.  I am on the last leg.  Before the first leg began, a computer program, with the assistance of a few people, decided which spots in the sea scallop habitat we should dredge and fly the HabCam.  These points were all plotted on a computerized map and the chief scientist connects the dots and decides the best route for the ship to take to make it to all the designated stations in the available time.

Here’s how our typical dredging process works:

About 10 minutes before we reach a dredge station, the Captain radios the lab from the Bridge (fancy name for the place at the top of the ship where the Captain and his crew work their magic) to let us know we are approaching our station.  At this point, I get on a computer in the dry lab to start a program that keeps track of our dredge position, length of tow, etc.  I enter data about the weather and check the depth of our dredge station.  When the engineer and Captain are ready, they radio the lab and ask for our depth and how much wire they need to send out to lower the dredge to the ocean floor.  I get the wire length from a chart hanging in the dry lab that is based on the depth of the ocean at the dredge site and use the radio to tell the engineer, who lets out that amount of wire until the dredge is on the ocean floor.  When the dredge hits the ocean floor, I use the computer program to start timing for 15 minutes and notify them when it is time to bring the dredge back up.

Alicia sorting fish
Alicia sorting the haul

The lab technicians and engineer raise and dump the dredge on a giant metal table, then secure it for the scientists to come in and begin sorting the haul.  Meanwhile, the scientists get dressed in foul weather gear to prepare for the messy job ahead.  That means I’m wearing yellow rubber overalls, black steel-toed rubber boots, blue rubber gloves, and a lovely orange lifejacket for each dredge.  Sometimes I add a yellow rubber jacket to the mix, too.  Science is not a beauty contest and I’m grateful for the protection!  Each scientist grabs two orange baskets, one large white bucket, and one small white bucket and heads to the table. The lab technicians shovel the catch toward each scientist as we sort.  Scallops go in one orange basket, fish go in the white bucket, crabs go in the small white bucket (sometimes), and everything else goes into the other orange basket.  This is considered “trash” and is thrown back overboard, but the watch chief keeps track of how many baskets of “trash” are thrown overboard during each haul and enters it into a computer database along with other data. After sorting the haul, much of the data collection takes place in lab called a “van”.

Research Van
Research “van” where we gather data from haul

The fish are sorted by species, counted, weighed, sometimes measured, and entered into a special computer system that tracks data from the hauls.  Sometimes we also collect and count crabs and sea stars.  The baskets of sea scallops are counted and weighed, and then individual scallops are measured on a special magnetic measuring board.  You lay the scallop on the measuring board, touch the magnet to the board at the end of the scallop, and the length is automatically entered into the database.    Some hauls have lots of sea scallops and some don’t have very many.  We had a couple hauls that were almost completely sand dollars and one that was almost completely sea stars.  I learned that sea stars can be quite slimy when they are stressed. I had no idea!

Sand dollar dresge
Dredge haul with LOTS of sand dollars

Sometimes my watch chief, Sean, will select a subsample of five sea scallops for us to scrub clean with a wire brush.

Alicia scrub scallops
Alicia scrubbing scallops at about 11pm

Next, we weigh and measure all five sea scallops before cutting them open to determine the gender.  We remove the gonad (the reproductive organ) and weigh it, then do the same with the “meat” (the muscle that allows the scallop to open and close its shell and the part people like to eat).  All of this information is recorded and each scallop is given a number.  We write the number on each shell half and bag and tag the shells.  The shells and data will be given to a scientist on shore that has requested them for additional research.  The scallop shells can be aged by counting the rings, just like counting the rings on a tree.

Alicia scrub scallops 2
Scrubbing scallops is dirty work!

Meanwhile, other people are hosing off the deck, table, buckets, and baskets used.  The dredge ends by shucking the scallops and saving the meat for meals later.  A successful dredge requires cooperation and communication between scientists, lab technicians, the Captain, and the crew. It requires careful attention to detail to make sure the data collected is accurate. It also requires strategic planning before the voyage even begins.  It’s an exciting process to be a part of and it is interesting to think about the different types of information that can be collected about the ocean from the HabCam versus the dredge.

Personal Log

Hallway to shower
Hallway to the shower and bathroom

Living on a ship is kind of like living in a college dorm again: shared room with bunkbeds, communal shower and bathroom down the hall, and meals prepared for you.  I can’t speak to the food prepared by the steward (cook) Paul, as I haven’t been able to eat much of it yet (I’m finally starting to get a handle on the seasickness, but I’m not ready for tuna steaks and lima beans just yet), but I do appreciate that the galley (mess hall) is open all the time for people to rummage through the cabinets for crackers, cereal, and other snacks. There’s even an entire freezer full of ice cream sandwiches, bars, etc.  If my husband had known about the ice cream, he probably would have packed himself in my duffel bag for this adventure at sea!

Taking a shower at sea is really not much different than taking a shower at the gym or in a college dorm… in the middle of a small earthquake. Actually, it’s really not too bad once you get used to the rock  of the ship.  On the floor where the scientists’ berths (rooms) are, there are also two heads (bathrooms) and two showers.  The ship converts ocean water into water that we can use on the ship for showering, washing hands, etc.  through a process called reverse osmosis.  Sea water is forced through a series of filters so small that not even the salt in the water can fit through.  I was afraid that I might be taking cold showers, but there is a water heater on board, too!   We are supposed to take “Navy showers”, which means you get wet, press a button on the shower head to stop the water while you scrub, then press the button to turn the water back on to rinse.  I’ll admit that I find myself forgetting about this sometimes, but I’m getting much better!

Shower
Shower on Hugh R Sharp

Today there was about an hour and a half of “steam” time while we headed to our next dredge location and had nothing official to do.  Some of the people on my watch watched a movie in the galley, but I decided to head to one of the upper decks and enjoy the gorgeous views of ocean in every direction.  I was awarded by a pod of about 15 common dolphins jumping out of the water next to the ship!

I’m starting to get a feel for the process of science at sea and am looking forward to the new adventures that tomorrow might bring!

Question of the Day

Which way do you think is the best way to learn about the sea scallop population and ocean life in general: dredging or HabCam?  Why do you think so?

 You can share your thoughts, questions, and comments in the comments section below.