NOAA Teacher at Sea
Jennifer Fry
Onboard NOAA Ship Miller Freeman (tracker)
July 14 – 29, 2009
Mission: 2009 United States/Canada Pacific Hake Acoustic Survey Geographical area of cruise: North Pacific Ocean from Monterey, CA to British Columbia, CA. Date: July 23, 2009
Here I am in the lab helping with the HAB samples.
Weather Data from the Bridge
Wind speed: 15 knots
Wind direction: 350°from the north
Visibility: clear
Temperature: 12.0°C (dry bulb); 11.8°C (wet bulb)
Sea water temperature: 9.7°C
Wave height: 2 ft.
Swell direction: 000°
Swell height: 4 ft.
Science/Technology Log
We began the day conducting 2 HAB (Harmful Algal Bloom) sample tests of the ocean. This tests the amount of plankton in the water. Scientists test this because some plankton can carry harmful toxins that can get into the fish and sea life we eat, such as clams. Later we sighted numerous marine mammals including: 2 humpback whales (breaching), 12 Pacific white-sided dolphins, and California sea lions.
Acoustic data
We made two trawls which provided plenty of hake for us to observe, measure, and collect data. Acoustic Judging: One important aspect of the acoustic hake survey is what scientists do when not trawling. There is a process called judging that fishery biologist, Steve De Blois spends most of his day doing. While looking at acoustic data, he draws regions around schools of fish or aggregations of other marine organisms and assigns species identification to these regions based on what he sees on the acoustic display and catch information gathered from trawls. He uses 4 different frequencies to “read” the fish signals—each shows different fish characteristics. Having started at the Alaska Fishery Science Center in 1991, this is Steve’s 19th year of participating in integrated acoustic and trawl surveys and his eighth acoustic survey studying Pacific hake. He’s learned how to read their signs with the use of sonar frequencies and his database. Steve tells us about the importance of science: “Science is a methodology by which we understand the natural world.”
Pacific white-sided dolphin
New Term/Phrase/Word Pelagic: relating to, living, or occurring in the waters of the ocean opposed to near the shore. In terms of fish, this means primarily living in the water column as opposed to spending most of their time on the sea floor.
Steve De Blois, NOAA Research Fishery Biologist, shares acoustic data with Julia Clemons, NOAA Oceanographer, aboard the Miller Freeman.
Did You Know?
Northern fur seals are pelagic for 7-10 months per year. Pelagic Cormorant birds live in the ocean their entire life.
Humpback whales
Animals Seen Today
Humpback whales (2), Pacific white-sided dolphin (12), California sea lions (6), and Northern fur seal.
Humpback whale breaching
In Praise of…Harmful Algal Bloom Samples
Crystal cold ocean water running through clear plastic pipes
Be patient as containers are carefully rinsed out three times.
The various sized bottles are filled with the elixir of Poseidon
Accurate measuring is essential.
Consistency ensures accurate results.
Once the water is filtered, tweezers gently lift plankton-laden filter papers.
All samples await analysis in the 20°F freezer.
Data from each test is later recorded;
Levels of domoic acid, Chlorophyll,
And types, populations, and species of phytoplankton and zooplankton.
NOAA Teacher at Sea
Elizabeth Eubanks
Onboard NOAA Ship David Starr Jordan July 22 – August 3, 2007
Mission: Relative Shark Abundance Survey and J vs. Circle Hook Comparison Geographical Area: Pacific Ocean, West of San Diego Date: July 25, 2007
Weather Data from the Bridge
Visibility: 10 miles
Air temperature: 20.4 degrees C
Sea Temperature at 500m: 6.3 degrees C
Sea Temperature at surface: 21.3 degrees C
Wind Direction: 280 W
Wind Speed: 18 kts
Cloud cover: clear – high cumulus
Sea Level Pressure: 1012.5 mb
Sea Wave Height : 2 ft
Swell Wave Height : 2 ft
NOAA Teacher at Sea Elizabeth Eubanks (right) on the platform taking a DNA sample from a Mako shark.
Science and Technology Log
Today was so exciting. Dr. Suzi Kohin asked me to the join crew down on the platform of the stern of the boat. At the end of the platform is a specially designed cradle in which the shark is placed to record data and issue tags. It was so very, very cool to be that close to sharks. I also got to put two of the tags in the shark. I first used a scalpel blade to make a small incision just below the dorsal fin. Then I place the tag in with a quick jab. The tag is called a spaghetti tag because it is a thin piece of wire with numbers and contact information on it. You can get a reward for calling it in. The other tag is called a Roto tag and it goes on the dorsal fin. This tag states that we have injected oxytetracycline into the shark. When someone turns this tag in with a couple of vertebrate they get $100.00. Next I am handed a pair of forceps and a scalpel blade, I cut a little junk of the dorsal fin and then hand it over to go into a solution for DNA testing. Then the Suzy calls out the estimated weight and we get the Oxytetracycline and I got to inject it into the shark on the belly or ventral side. Oxytetracycline is pretty cool, it is what teens use for acne. But the really great thing about it is that it also stains your bones when you use it. It shows up similar to how you would see the rings on a stump of a tree. So it is a great way for scientist to do bone growth investigation.
Risso’s dolphin
Personal Log
Wildlife- Forever I have been tracking all of the birds that I have seen. I don’t particularly keep a count, but I do check them off and write little notes about them in my National Geographic bird book. When I was in wild life biology classes at Penn State Dubois I use to keep track of everything I saw in various books and lists. One huge surprise of this entire summer has been how many new species of birds I have logged. It is amazing. My guess it that I have logged at least 20 new species, which is a lot for me, for one summer. But I really wish I had kept up with my wildlife list as a whole. If I had, I could add a couple species more today. The Common Dolphin (which I actually saw days ago as well), two Blue Whales and a pod of Risso Dolphins – they are beautiful as I am sure you can see from the photo above. Of course now I have an extra challenge with my species list. I like to make sure I get a photo as well – just so that there is no mistake to what I am seeing! If you are into wildlife like I am, I highly recommend you start a list now, it is fun to list where, when and what it was doing when you saw it.
Common dolphin off Catalina Island
Question of the Day
If I tell you to lie on your ventral side, which side of your body would you lay on? Suppose I told to lie on your dorsal side, what side would you lay on?
Question of the trip: Which hook, the J or Circle, will catch more sharks?
Please make a hypothesis. Utilize resources to justify your hypothesis. ———Yes, you get extra credit for this.
NOAA Teacher at Sea
Elizabeth Eubanks
Onboard NOAA Ship David Starr Jordan July 22 – August 3, 2007
Mission: Relative Shark Abundance Survey and J vs. Circle Hook Comparison Geographical Area: Pacific Ocean, West of San Diego Date: July 24, 2007
Weather Data from the Bridge
Visibility: 10nm
Air temperature: 19.8 degrees C
Sea Temperature at surface: 20.6 degrees C
Wind Direction: 250 W
Wind Speed: 09 kts
Cloud cover: partial Alto cumulus
Sea Level Pressure: 1011.4 mb
Sea Wave Height : 1 ft
Swell Wave Height : 2-3 ft
NOAA scientist Dr. Suzy Kohin (center places) two different satellite tags on a 197cm Mako shark.
Science and Technology Log
Today was absolutely beautiful, the sun was shining all day. We caught 3 sharks 2 Mako and 1 Blue in the first set and 1 Mako in the second set. This isn’t a whole lot of sharks but for me, even one shark is great! The really cool thing about the day was that we got a Mako large enough to put satellite tags on. The tags are very expensive ~ $5,000, so they want make sure it is a big enough shark to wear the gear. One of the tags is called a P.A.T. and this stands for Pop Off Archival Tag. This tag collects data such as depth, temperature, light measurement, how far it is from the equator and rates of change. It can be set to record information during certain time periods. They only last up to 8 months and then they pop off. Dr. Kohin set this one to pop off in 6 months. The data is stored in the device so data cannot be retrieved until it comes off of the shark. It pops off of the shark floats to the top of the ocean surface and then transmits basic data to a central location. Hopefully someone will find the tag and mail it back to NOAA – Dr. Kohin and she will receive a more complete data report. The other tag S.P.O.T. – Satellite Position Only Tag goes on the dorsal fin and as it implies, it only tracks satellites just like a GPS does allowing scientists to know the exact location of the shark.
P.A.T. (black tag) and S.P.O.T. (satellite tags)
Lauren Miko wanted to know what the Circular hook looked like, so here is a photo comparing the two. The circle is believed to cause less damage on the shark. The way that it is curved makes it harder for the shark to swallow, thus reducing the potential amount of internal damage. Also because of the curve sharks are most likely to get this type of hook stuck in its lip/jaw. These shark studies tag and release the shark and are conducted for the overall betterment of the shark, so they need to be kept healthy. Sharks are more likely swallow a J hook and could be damaged in ways that the scientist can’t view even if they remove the hook. Regardless if the shark appears to be in great condition it is possible that it has suffered internally and isn’t showing effects at the time. Does this make sense? Let me know if it doesn’t. FYI- the circular hook is harder to bait, so it is curved up just slightly to make it easier and not flat if you lay it on a table.
Circular Hook and J Hook size 16/0
Personal Log
This ship is so huge. We basically have about 5 hours a day we have to be on deck working. Besides that time I am free and just so you know I spend a lot of time on this log for my students and all who read. I also read, send out emails, take dog naps in the sun and wander around from deck to deck , it is amazing how you could go for hours on this large vessel and not cross paths with anyone and then all of sudden you will go to the top deck and run into two people relaxing. It is like walking through a maze. There are more likely places where you will find folks such as the Mess decks where you eat, snack, relax, watch the tube and of course make scientifically created milkshakes. You also may find people in the crew deck. This is where they have a huge TV, tons of books and lets see, about 500 movies to choose from. The more I think of it, the more I realize that most middle school kids would love this ship. Sean Maloney, it has your name written all over it! Of course although we have amazing food we don’t have your mom’s great banana bread – at least not yet! Lauren was my first student to send an email, then followed Karissa and Sean.
Thank you so much for reading and sending a note and questions. Lauren I believe I answered your question – do you now know what a circle hook looks like?
Question of the Day
You will notice that at the top of my weather data I list visibility in nm that stands for nautical mile. I also use the term when I say that we put out 2 nautical miles of long line to fish from. What is the difference between a mile and a nautical mile?
Question of the trip: Which hook, the J or Circle, will catch more sharks?
Please make a hypothesis. Utilize resources to justify your hypothesis. ———Yes, you get extra credit for this.
Grad students, Dovi Kacev, Heather Marshall and Lyndsay testing their ability to make the best milkshake – should you add brownies or Oreo cookies?
NOAA Teacher at Sea
Elizabeth Eubanks
Onboard NOAA Ship David Starr Jordan July 22 – August 3, 2007
Mission: Relative Shark Abundance Survey and J vs. Circle Hook Comparison Geographical Area: Pacific Ocean, West of San Diego Date: July 23, 2007
Weather Data from the Bridge
Air temperature: 19.7 degrees C
Sea Temperature at 300m 7.9 degrees C
Sea Temperature at surface: 19.1 degrees C
Wind Direction: 350 (NW)
Wind Speed: 5.2 kts
Cloud cover: Partial – Alto cirrus
Sea Level Pressure: 1011.5 mb
Sea Wave Height 2
Swell Wave Height <1
NOAA Teacher at Sea Elizabeth Eubanks models the abandon ship suit, also known as a “Gumby” suit.
Science and Technology Log
Today has been beautiful. The lines were set at 0600 and then hauled at 1000. We only caught 3 sharks this morning, 2 Blue and 1 Mako. We set lines again 1330 ( Do you know what time that is? – 1:30pm) While we were having a break we noticed a huge pod of Common Dolphins. They appeared to be having so much fun flying up into the air. There were at least 30+ it was so cool to see so many. Our haul this evening was a skunk – no sharks, but that is okay tomorrow is a new day. We had drills today, fire and abandon ship. The fire drill required us to move to the dry science lab, where I already happened to be. The abandon ship drill required that we put on long pants, long sleeve shirt, a hat and our “gumby” suit, as it is called. It is a dry suit, much like some divers would wear. It is big and bulky and funny looking.
I had mentioned yesterday that although the main focus of this trip is to test the J and Circle hooks, many other studies are being supported. Last night after dark some of us fished for Rockfish. Russ Vetter a NOAA scientist who is Head of Fish Ecology within the South West Fisheries Center and heads 4 teams of scientists. Those teams study small pelagics such as anchovies, egg and larvae- ichthyo-plankton, pelagic sharks which we are studying now and his personal group is molecular ecology which has been studying Rockfish for years. I got an earful last night. The Rockfish that we were fishing for were about 200 feet below the surface. So they live in very deep water, which means that they are benthic fish. There are some that are pelagic, but I will get to them later.
Various species of Benthic Rockfish
Dr. Vetter was telling me that there are about 130 different species of Rockfish in the Pacific, 70 of which are in the region he studies. They are one of the most sought after for commercial fishing. These fish bare live young, which is very unusual for a fish. These fish also live very long, well past 60 years and some in the tub shown above could be over 40. Scientists have a theory that the older the mother is, then the better mother she is to her live-born babies. Scientist are still learning a lot about them, but like many other fish they are becoming over fished in certain areas and greatly depleting (making vanish) populations of these fish. There are two ways to fish for Rockfish, one is to create a long line that is geared to benthic fish and the other is to simply fish the way we did last night, with deep sea rigs. We were catching them pretty quickly and probably caught 14 or so within 45 minutes. We used rigs that had 2 hooks on them and it was common to pull up two at a time.
NOAA Teacher at Sea Elizabeth Eubanks holds a Rosie Rockfish.
When you pull up most of these fish, their bodies and eyes are all bulged out and sometime their swim bladder is coming out of their mouth and if you notice in the photo above they are all floating although many are not dead yet. Why is this? What happens to them? — If you can answer this question you are half way to figuring out the answer to my question of the day. The fisheries management has now set a limit to how many fish the commercial fisherman are allowed to bring per outing and they have set a limit of only 2 hooks per rod, whereas prior to this some commercial fishermen would use up to 10 hooks. There is no size limit because once you catch these fish you can’t or have no reason to toss them back (referring to question of the day).
The commercial fishermen are pretty easy to monitor when they fish these benthic, fish. Management can go to their boat or meet them at the docks to check on them. Managing pelagic Rockfish is more difficult, because these fish hang out in the kelp and are easier to catch from a smaller craft, which allows for potential deception of total catch.
We catch the fish, fillet the fish, eat the fish and then Dr. Vetter will take the carcasses (bones) to his lab to study the DNA. The more you learn about a fish, the more you can protect it from being depleted (vanishing) from an area. This is good, because so many fishermen count on this fish for their lively hood. If scientist learn more about the fish and protect the fish, then we will always have that fish around. Also we know that golden rule “we are all connected – we are all affected.” So if we deplete the Rockfish, in some way we too are affected. Right? –Right!
Personal Log
I was so excited to have the opportunity to fish last night. But I did hate that my catch was so small and I couldn’t just toss it back into the ocean, because it wouldn’t survive. So that made me feel bad, it was still alive when I caught it and it looked at me with it’s big beautiful eyes. I am getting into the groove of things here. I was so happy to have slept well last night. I got up early even though I could’ve slept in. It is just so nice to be here. Of course I miss Rob and Hooch. I really miss Rob, because I know he would be so interested in all that we are doing on this ship.
Now, I am in terrible trouble. I just went into the galley to get a Fig Newton and I was told to open the cooler, that there was something better in there… I really thought they could be wrong, because I am not a huge ice cream fan. I am selective about what types really suck me in….. and OH NO! Ben and Jerry’s Cherry Garcia has that capability! The have a huge carton of it. I am still amazed at all the food and well prepared meals on board. Today, for lunch, I had black eyed pees, rice, mixed veggies and a great salad with hearts of palm and that was only the veggie stuff they offered!
Oh happy day, Elizabeth Eubanks
Question of the Day
Why would the Rosie Rockfish not survive if I put it back into the ocean, right after I caught it and realized that it was still alive, but very small?
Why is this (the inability of the rockfish to survive after being caught) a major problem for commercial fishing industries and the population of the Rockfish?
One more for fun- What is the difference between an ice cream float and ice cream soda?
Question of the trip: Which hook, the J or Circle, will catch more sharks?
Please make a hypothesis. Utilize resources to justify your hypothesis. ———Yes, you get extra credit for this.
Vocabulary
Taken from the Sea, State, Wind and Clouds- US Department of Commerce Sea Waves are generated by the wind blowing at the time of observation, or in the recent past, in your local area. Sea waves change after they move under the wind that has created them.
Sea Swell Waves – have traveled into your area of observation, after having been generated by winds in other areas (sometimes thousands of miles away). Swell waves remain symmetrical and uniform.
NOAA Teacher at Sea
Elizabeth Eubanks
Onboard NOAA Ship David Starr Jordan July 22 – August 3, 2007
Mission: Relative Shark Abundance Survey and J vs. Circle Hook Comparison Geographical Area: Pacific Ocean, West of San Diego Date: July 22, 2007
Weather Data from the Bridge
Air temperature: 18 degrees C
Sea Temperature at 250 m below: 8.6 degrees C
Sea Temperature at surface: 20 degrees C
Wind Direction: 240 (W)
Wind Speed: 7 kts
Cloud cover: Full cloud cover – Stratus
Sea Level Pressure: 1013.8 mb
Sea Wave Height 1’
Swell Wave Height 2’
Scientists Suzanne Kohin and Russ Vetter stabilize this 160cm Mako shark, while Grad student Heather Marshall brings tools to collect data.
Science and Technology Log
I boarded the NOAA ship David Starr Jordan at 0800 (everything is in Military time here). Rob, my husband, was with me and he was permitted to board the ship to look around and help carry my bags into my room, so that was a nice start. We departed at 0900 and I watched the dock where Rob was, until he became a little dot. As we were leaving we passed the Naval base where they train the seals and then an area where there tons of submarines. I got a kick out of the seal lions as they relaxed on buoys. After ~ an hour at sea, I couldn’t see land anymore – very strange! We had a meeting at 10:30am, we got instructions for safety, rules and regulations and a tour of the ship. One rule is that you cannot wear open toed shoes. We ate lunch and then set lines at 1:30pm to try to catch sharks.
Background info: NOAA Ship DAVID STARR JORDAN is on its 3rd leg of travel this summer. The first 2 legs involved study of Shark Abundance (how many sharks there are). The study that we are doing now is designed to enhance the Abundance study. The scientists are trying to determine which type of hook will catch the most sharks, the J hook or the Circle hook. – Hint a great PROBLEM for this “lab” would be: Which hook, the J hook or the Circle hook will catch more sharks? What is your hypothesis? Although this is the main point of the experiment, they are recording other data as well, which I will list later. I mentioned earlier that we were setting lines. Setting the lines, involves as very long line – 2 nautical miles long and every 50 ft a hook is attached. And after 5 hooks are attached a buoy is attached. Can you picture this? So once all the lines are set, there are approximately 200 + hooks attached. To make this test a good one reducing variables, every other hook is J hook and then the next hook is a Circle hook. I will talk more about line setting and hook attachment later.
Tonight was so exciting. When we pulled in our lines at 5:30pm, we got 4 sharks: 2 Blue and 2 Mako and 1 pelagic Stingray. It was so thrilling to hear the crew screaming “Shark!” And instead of the traditional running or swimming to get away from the shark, the shark is pulled in and touched. Scientist Russ Vetter had his head so close to the shark’s head, it made me shiver. When I asked him how many times he had been bit, he stated that you only get bit once. The Blue sharks were absolutely beautiful and for those of you know me well, it isn’t just because they are blue! But the blue color of these sharks is absolutely spectacular—it takes your breath away. The other thing that took my breath away this evening was the 160cm Mako shark. It got hooked in the fin, so it was harder to pull the shark in for data and boy did it give an impressive fight. Although, this part of the work is finished there is still a lot going on. We have to prep tags and lines and scientist are all around me now recording data about the ocean. Right now it is 8.6 degrees C at 250 m down. But on the water surface the temp is 20 degrees C. The surface (at the top) of the water is actually a little warmer than the air temperature right now. I also hear talk of late night fishing for rock fish and squid.
NOAA Teacher at Sea, Elizabeth Eubanks, standing in front of the majestic NOAA ship DAVID STARR JORDAN in the San Diego Harbor.
Personal Log
I have been at sea for a grand total of 12 hours now and so far so great! Everyone has been extremely kind and helpful. I am sure many of you are wondering if I have gotten sea sick and the answer is NO and I don’t plan on it. I took Dramamine and chewed some ginger gum before the ship left. After about an hour on the ocean I started to feel tired and little like I was floating on my legs. I am not sure if this was due to the ocean waves or the drugs! After lunch I went up to the very top of the ship and took a long snooze. One of the emails I had received prior to the cruise said to bring snacks, so I wasn’t sure what the food situation would be, but I can tell you this- I won’t go hungry! They serve buffet style with many choices and snacks in between. You will also be happy to know that they have lots of veggies on board!
Please direct your emails (questions for me and answers to my questions) to my yahoo account (so I can keep track of your questions) AND to the email address listed below. I will NOT be checking my yahoo email account until I return to land! I love being around all of these scientists and research, it reminds me of college and why I have always loved science so much. I hope everyone is having a great summer and I appreciate you spending time with me on this adventure.
Question of the Day
What does the word pelagic mean?
Question of the trip: Which hook, the J or Circle, will catch more sharks?
Please make a hypothesis. Utilize resources to justify your hypothesis. ———Yes, you get extra credit for this.
NOAA Teacher at Sea
Cary Atwood
Onboard NOAA Ship Albatross IV July 25 – August 5, 2005
Mission: Sea scallop survey Geographical Area: New England Date: July 29, 2005
Weather from the Bridge
Visibility: Clear
Wind direction: NNW (230)
Wind speed: 15 knots
Sea wave height: unknown
Swell wave height: unknown
Seawater temperature: 11.4° C
Sea level pressure: 1012 millibars
Cloud cover: Dense Fog
Question of the Day:
Define these terms used aboard the ALBATROSS IV: lines, bosun, steam, swell
Yesterday’s answer: Pelagic means “of the sea.” Lesser shearwaters are part of a larger group of pelagic birds who spend their entire adult lives out in the open ocean. They rest, sleep, feed and mate on the water. The only time they return to land is to lay a brood of eggs in the same geographic location where they were born and fledged before they left for the open waters of adulthood.
Science and Technology Log
Today’s topic is ALBATROSS IV Geography: a mini guide to the important places on the ship.
Fantail—Another name for the stern of the ship. Since this is a ship on which scientific missions are completed, this section of the boat has space to accommodate the gantry and boom, which pulls up the dredge, as well as a full wet lab to process scallops and other groundfish species. Wet Lab—The area in the fantail with touch computer screens and magnetically activated measuring boards and scales to document scallop survey data. Bridge—The enclosed area where navigation and sighting is done by the captain and crewmembers. A full complement of computers is used to assess position, direction and locations of ships and buoys.
Computer Room—Located on the middle deck, it contains computers with e-mail access, FSCS computers and computer servers. In every main area of the ship, a computer monitor with a closed circuit view of the fantail can be seen. This is so the scientists, engineers, and captain can know the status of the fantail area at all times. Galley—Another name for the kitchen area. Food for the crew is prepared here by Jerome Nelson and served buffet style by Keith. The menu is posted daily and always includes a wide assortment of meats, breads and vegetables, as well as that all-important treat: ice cream! Hurricane Deck—AKA “Steel Beach”- a small deck above the fantail used for sunbathing and relaxation. Engine Room—Noisy room down in the bulkhead where the engineering crew keeps the two diesel engines running smoothly. Boom and Gantry—Found on the aft deck (otherwise known as the fantail), these are the all-essential components needed to tow the eight-foot net. The gantry is the large metal A-frame and the boom is the moveable arm or crane, which uses large cables and a pulley system to bring up the net each time. Cabin or stateroom—Sleeping quarters for two or three persons. It has portholes, bunks and a shared bathroom.
Personal Log
Today the ocean waters have calmed a bit. Thursday’s wave action gave new meaning to the term “rock the boat,” which is exactly what we did. The swells, up to three feet in height, were the distant result of Tropical Storm Franklin as it made its way up into the waters of New England. A good safety rule we learned during our brief introductory meeting was to make sure you gave “one hand to the boat” at all times. This was especially good advice as my footing placement became increasingly unpredictable. Ships are built to withstand the high seas, and fortunately, there are plenty of places to put a firm grip as one makes their way around the ship.
