Pascagoula – NOAA Teacher at Sea Blog

July 28, 2023July 28, 2023

Martin McClure: Getting Acquainted, July 28, 2023

NOAA Teacher at Sea

Martin McClure

Aboard NOAA Ship Oregon II

July 25 – August 9, 2023

Mission: Shark/Snapper Long Line Survey

Geographic Area of Cruise: Gulf of Mexico/Atlantic Ocean

Date: Jul 28, 2023

Weather Data from the Bridge

Latitude: 25°49.441’N

Longitude: 79°59.970’W

Temperature: 30.5° Celcius

Wind Speed: 7 knots

The Oregon II at dock in Pascagoula, Mississippi.

Science and Technology Log

NOAA conducts the Shark/Snapper Longline Survey each year at the same time and place. It goes from July through September and surveys from Cape Hatteras, North Carolina, to West Palm Beach, FL, and the U.S. northern Gulf of Mexico from southwest Florida to Brownsville, TX. This is a longline survey and one mile of gear is baited and laid down for one hour.

When the line is reeled in, the science and fishing teams take them off the hooks and record data on the fish. The data gathered includes what species (kind of fish) are caught, if they are male or female, their age, weight and length. Additionally, the sharks will be tagged with a number and released.

The data collected will be used by NOAA to help manage the health of the fishery. It is one set of data that goes into deciding how many fish can be safely taken from the ocean each year. Without this information, fishermen might take too many fish to keep the population stable.

a view up at four flags flown on a line, one after the other. the top is a navy blue flag with a black square. the second has vertical bands of red, white, and blue. the third is diagonally split between a lower yellow right triangle and an upper red right triangle. the last has horizontal bands of yellow, navy, yellow. — The *Oregon II* call sign flags, WTDO

NOAA Ship Oregon II is the ship that is used to conduct this survey each year. It takes a lot of people working together to accomplish this. The crew of the Oregon II is made up of several teams. Everyone has a job as a part of the team to make sure everything works as needed.

The NOAA Corps are the officers on the ship. They are responsible for the overall operation of the ship and are in charge of navigation, steering and everyone’s safety. They work in shifts from the “bridge.”

The engineering team makes sure that everything is working properly. This includes the engines, electrical systems, fresh water and the all-important air conditioning.

The deck crew includes the professional fisherman who do boat maintenance, prepare fishing gear as well as handle the big fish.

There are two stewards who prepare our meals and keep the dining area clean. They keep us well fed with several choices available at each meal three times a day.

The electronics department has just one person who is responsible to make sure all of the technology is working properly. That is a very big responsibility on this ship.

Finally, there is the science team. That is where I fit in. There are four NOAA scientists and six volunteers. I am one of the volunteers. The other volunteers are all university students.

There are 29 people on board and everyone works on shifts. The ship operates 24 hours a day so all jobs must be done around the clock. Most teams have two shifts that each last for… you guessed it… twelve hours.

Personal Log

These first few days have been spent getting acquainted with the layout of the ship, learning the routines of life on the ocean and the people on the ship. The most striking feature is that there seems to be an incredible amount of equipment packed into such a small space. Everything a crew of 29 could need for three weeks, emergency equipment and replacement parts. Yet, in any one place, there is adequate room to move and work. I have a “stateroom” that I share with one other member of the science team. Each of us have a “rack” to sleep in, lockers and drawers for personal belongings as well as a fold out desk to work at. We also have a sink and mirror. All this in a room that is about 7’X10’.

view of Martin's stateroom. we see high sided bunk beds built into the wall, a sink and a cabinet, the edge of a desk and a desk chair, two backpacks. — stateroom with two berths

Rarely are we both in there but there is adequate room when that happens. The “passageways” are narrow and it takes coordination to pass another crewmember. The “mess” seats twelve people, at most, so we have to eat meals in shifts.

the mess, or dining area, of NOAA Ship Oregon II. there are two tables anchored to the floor by posts; each table has six swivel chairs anchored to the floor on posts, as at a diner. someone sits at one seat, facing away from the camera. there are two televisions mounted on the wall, one showing a baseball game. in the foreground is a small refrigerator with juices and tea. — NOAA Ship *Oregon II*‘s “mess” seats 12 people at most.

There are three bathrooms and two showers available for general use. Showers should be short to preserve water as well as to make it available for others to use. There are three different “gym” areas with equipment to work out in. My favorite is the flying bridge where you can look out over the ocean.

a view over the bow of NOAA Ship Oregon II, from high up. we can see the front mast, lines, part of a davit arm. the sky is blue, clear of clouds if a bit hazy on the horizon. the ocean is dark blue and calm. — view from the flying bridge of NOAA Ship *Oregon II*

Safety is a priority on board the ship. We start by using basic safety procedures while moving around the ship. While underway, the pitch (front to back motion) and roll (side to side motion) of the ship never stops. This becomes more or less pronounced depending on the weather. So moving through the passageways and doorways and especially on the outside decks, one must be careful to use a hand to keep their balance. The stairwells are narrow and steep but negotiable. When using stairwells always have 3 points of contact, that means use two hands and then a foot is the third point of contact.

view down a narrow metal staircase. equipment is stashed on the other side of a railing to the right of the photo. — view down a stairwell on NOAA Ship *Oregon II*

Moving around comes more easily with time. No open toed shoes are to be worn except on the way to and from the shower. Safety equipment must be worn when working. We will be wearing hard hats, gloves, glasses and a work vest. The work vest looks a lot like a personal flotation device but flat. If you fall overboard it will automatically inflate. There is a lot of equipment and devices all over the ship for use in emergency situations.

firefighting equipment mounted on an interior wall: an axe (labeled "Oregon II"), a crow bar, a folded up fire hose. a red plaque on the wall reads FIRE STATION NO. 4. — firefighting equipment in case of emergencies

Fire extinguishers, AEDs, masks for smoke, and, of course, life rafts. We have to do drills to make sure that we know what to do in emergencies.

four people stand on the aft deck "decked out" in firefighting gear. they wear yellow fireproof pants and jackets, heavy black and yellow boots, large yellow gloves, black or white helmets, gas masks, some sort of backpack. the sky is bright blue with some wispy clouds and the ocean is fairly calm. — our firefighting team

Martin stands on the aft deck in a heavy orange survival suit with his arms raised for the photo. it's only partially zipped, revealing his Teacher at Sea t-shirt underneath. He wears a Teacher at Sea hat and sunglasses. other survival suits and flotation devices rest on deck around him — That’s me in a “Gumby” suit for survival in case we have to abandon ship.

Did You Know?

Did you know that not all sharks reproduce the same way? Be sure to check future blogs to find out how.

Animals Seen Today:

the dorsal fin of a dolphin visible above water — dolphin

and also: masked booby, swallow, flying fish, barracuda.

July 11, 2019July 14, 2019

Hayden Roberts: Data and More Data… July 11, 2019

NOAA Teacher at Sea

Hayden Roberts

Aboard NOAA Ship Oregon II

July 8-19, 2019

Mission: Leg III of SEAMAP Summer Groundfish Survey

Geographic Area of Cruise: Gulf of Mexico

Date: July 11, 2019

Weather Data from the Bridge:
Latitude: 28.29° N
Longitude: 83.18° W
Wave Height: 1-2 feet
Wind Speed: 11 knots
Wind Direction: 190
Visibility: 10 nm
Air Temperature: 29.8°C
Barometric Pressure: 1013.6 mb
Sky: Few clouds

Science Log

As I mentioned in my introductory post, the purpose of the SEAMAP Summer Groundfish Survey is to collect data for managing commercial fisheries in the Gulf of Mexico. However, the science involved is much more complex than counting and measuring fish varieties.

The research crew gathers data in three ways. The first way involves trawling for fish. The bulk of the work on-board focuses on trawling or dragging a 42-foot net along the bottom of the Gulf floor for 30 minutes. Then cranes haul the net and its catch, and the research team and other personnel weigh the catch. The shift team sorts the haul which involves pulling out all of the shrimp and red snapper, which are the most commercially important species, and taking random samples of the rest. Then the team counts each species in the sample and record weights and measurements in a database called FSCS (Fisheries Scientific Computer System).

SEAMAP can be used by various government, educational, and private entities. For example, in the Gulf data is used to protect the shrimp and red snapper populations. For several years, Gulf states have been closing the shrimp fishery and putting limits on the snapper catches seasonally to allow the population to reproduce and grow. The SEAMAP data helps determine the length of the season and size limits for each species.

Tampa Bay area waters — Digital chart of the waters off the Tampa Bay area. Black dots represent research stations or stops for our cruise.

Another method of data collection is conductivity, temperature, and depth measurements (CTD). The process involves taking readings on the surface, the bottom of Gulf floor, and at least two other points between in order to create a CTD profile of the water sampled at each trawling locations. The data becomes important in order to assess the extent of hypoxia or “dead zones” in the Gulf (see how compounded data is used to build maps of hypoxic areas of the Gulf: https://www.noaa.gov/media-release/noaa-forecasts-very-large-dead-zone-for-gulf-of-mexico). Plotting and measuring characteristics of hypoxia have become a major part of fishery research especially in the Gulf, which has the second largest area of seasonal hypoxia in the world around the Mississippi Delta area. SEAMAP data collected since the early 1980s show that the zone of hypoxia in the Gulf has been spreading, unfortunately. One recent research sample taken near Corpus Christi, TX indicated that hypoxia was occurring further south than in the past. This summer, during surveys two CTD devices are being used. The first is a large cylinder-shaped machine that travels the depth of the water for its readings. It provides a single snapshot. The second CTD is called a “Manta,” which is a multi-parameter water quality sonde (or probe). While it can be used for many kinds of water quality tests, NOAA is using it to test for hypoxia across a swath of sea while pulling the trawling net. This help determine the rate of oxygenation at a different depth in the water and across a wider field than the other CTD can provide.

Setting up the CTD for its first dive of our research cruise.

Did You Know?

Algae is a major problem in the Gulf of Mexico. Hypoxia is often associated with the overgrowth of certain species of algae, which can lead to oxygen depletion when they die, sink to the bottom, and decompose. Two major outbreaks of algae contamination have occurred in the past three years. From 2017-2018, red algae, which is common in the Gulf, began washing ashore in Florida. “Red Tide” is the common name for these algae blooms, which are large concentrations of aquatic microorganisms, such as protozoans and unicellular algae. The upwelling of nutrients from the sea floor, often following massive storms, provides for the algae and triggers bloom events. The wave of hurricanes (including Irma and during this period caused the bloom. The second is more recent. Currently, beaches nearest the Mississippi Delta have been closed due to an abundance of green algae. This toxic algae bloom resulted from large amounts of nutrients, pesticides, fertilizers being released into the Bonnet Carre Spillway in Louisiana because of the record-high Mississippi River levels near Lake Pontchartrain. The spillway opening is being blamed for high mortality rates of dolphins, oysters and other aquatic life, as well as the algae blooms plaguing Louisiana and Mississippi waters.

Personal Log

Pulling away from Pascagoula yesterday, I knew we were headed into open waters for the next day and half as we traveled east down the coast to the Tampa Bay, FL area. I stood on the fore deck and watched Oregon II cruise past the shipyard, the old naval station, the refinery, navigation buoys, barrier islands, and returning vessels. The Gulf is a busy place. While the two major oceans that flank either side of the U.S. seem so dominant, the Gulf as the ninth largest body of water in the world and has just as much importance. As a basin linked to the Atlantic Ocean, the tidal ranges in the Gulf are extremely small due to the narrow connection with the ocean. This means that outside of major weather, the Gulf is relatively calm, which is not the case with our trip.

Navigation buoy that we passed leaving Pascagoula harbor.

As we cruise into open waters, along the horizon we can see drilling platforms jutting out of the Gulf like skyscrapers or resorts lining the distant shore. Oil and gas extraction are huge in this region. Steaming alongside us are oil tankers coming up from the south and cargo ships with towering containers moving back and forth between Latin America and the US Coast. What’s in the Gulf (marine wildlife and natural resources) has geographic importance, but what comes across the Gulf has strategic value too.

The further we cruised away from Mississippi, the water became choppy. The storm clouds that delayed our departure the day before were now overhead. In the distances, rain connected the sky to sea. While the storm is predicted to move northwest, the hope is that we can avoid its intensification over the Gulf Stream as we move southeasterly.

Choppy seas as we cruise across the Gulf to the West Coast of Florida to start our research.

I learned that water in the Gulf this July is much warmer than normal. As a result, locally produced tropical storms have formed over the Gulf. Typically, tropical storms (the prelude to a hurricane) form over the Atlantic closer to the Equator and move North. Sometimes they can form in isolated areas like the Gulf. Near us, an isolated tropical storm (named Barry) is pushing us toward research stations closer to the coast in order to avoid more turbulent and windy working conditions. While the research we are conducting is important, safety and security aboard the ship comes first.

July 11, 2019

Hayden Roberts: Wait-and-See (or Is It Sea?) July 8, 2019

NOAA Teacher at Sea

Hayden Roberts

Aboard NOAA Oregon II

July 8-19, 2019

Mission: Leg III of SEAMAP Summer Groundfish Survey

Geographic Area of Cruise: Gulf of Mexico

Date: July 8, 2019

Weather Data from the Bridge

Latitude: 30.35° N
Longitude: 88.6° W
Wave Height: 1-2 feet
Wind Speed: 10 knots
Wind Direction: Northwest
Visibility: 10 nm
Air Temperature: 33°C
Barometric Pressure: 1012 mb
Sky: Few clouds

Science Log

Day one of my trip and we are delayed leaving. Growing up in Oklahoma, you think you know weather until one of the NOAA fishery biologists assigned to the ship provides you a lengthy explanation about the challenges of weather on setting sail. As he put it, the jet stream is throwing off the weather. This is true. Studies have suggested that for a few years the polar jet stream has been fluctuating more than normal as it passes over parts of the Northern Hemisphere. The jet stream is like a river of wind that circles the Northern Hemisphere continuously. That river meanders north and south along the way. When those meanders occur over the Atlantic and the Pacific Oceans, it can alter pressure systems and wind patterns at lower latitudes and that affects how warm or raining it is across North America and Europe.

This spring in Oklahoma, it has led to record-breaking rains that have flooded low lying areas across the Great Plains and parts of the southeastern United States. Thunderstorms have generally been concentrated in the southern and middle section of the US as the jet stream dips down. The NOAA biologist also indicated that the delay in our departure could be blamed on the El Niño effect.

El Niño is a natural climate pattern where sea water in the central and eastern tropical Pacific Ocean is warmer than average. This leads to greater precipitation originating from the ocean. According to NOAA scientists, El Niño is calculated by averaging the sea-surface temperature each month, then averaging it with the previous and following months. That number is compared to average temperatures for the same three-month period between 1986 and 2015, called the Oceanic Niño index. When the index hits 0.5 degrees Celsius warmer or more, such as right now, it’s classified as an El Niño. When it’s 0.5 degrees Celsius cooler or more, it’s a La Niña. During an El Niño, the southern part of the U.S. typically experiences wetter than average conditions, while the northern part is less stormy and milder than usual. During a La Niña, it flips, with colder and stormier conditions to the north and warmer, less stormy conditions across the south. However, the El Niño this year has been classified as weak, which means typically the wetter conditions do not push into the Gulf of Mexico region, but exceptions can occur. With the fluctuating jet stream, the El Nino has vacillated between the Plains region and the upper South and regions closer to the Gulf. Thus, the storm causing our delayed departure comes from a weather condition that has been pushed further south by the jet stream.

While these may be causes for the delayed departure, the actual sailing conditions at the time of our voyage are the main concerns. Looking at the NOAA Marine Forecast webpage (https://www.nws.noaa.gov/om/marine/zone/off/offnt4mz.htm), the decision for our delay is based on a storm producing significant wave heights, which are the average height of the highest 1/3 of the waves. Individual waves may be more than twice the average wave heights. In addition, weak high pressure appears to dominate the western Gulf and will likely last mid-week. Fortunately, we are set sail into the eastern Gulf off the coast of Florida. We should be able to sail behind the storm as it moves west. We do have to watch the surface low forming along a trough over the northeast Gulf later in the week. The National Hurricane Center in Miami (which provided weather data in the Atlantic and the Gulf for NOAA) predicts that all of this will intensify through Friday (July 12) as it drifts westward. This will produce strong to near gale force winds and building seas for the north central Gulf. Hopefully by then we will be sailing south of it.

Gulf of Mexico weather forecasts — Digital interface map for regions of the Gulf of Mexico and its weather forecasts (National Weather Service, NOAA)

Did You Know?

The weather terms El Niño and La Niña can be translated from Spanish to English as boy and girl, respectively. El Niño originally applied to an annual weak warm ocean current that ran southwards along the coast of Peru and Ecuador around Christmas time before it was linked to a global phenomenon now referred to as El Niño–Southern Oscillation. La Niña is sometimes called El Viejo, anti-El Niño, or simply “a cold event.” El Niño events have been occurring for thousands of years with at least 26 occurring since 1900.

Personal Log

I boarded NOAA’s Oregon II yesterday when the ship was virtually empty. It was Sunday, and we were not set to leave until mid-afternoon the following day (and now Tuesday, July 9). Spending the night on the ship was more comfortable than I had expected. While the stateroom was cramped (I share it with one other crew member), the space is surprisingly efficient. I had plenty of space to store my gear. The bunkbed was more cozy than restricted.

NOAA Pascagoula Lab — Even though it was Sunday and everything was closed, I had to stop for a selfie.

NOAA Ship Oregon II — My first look at NOAA Ship *Oregon II.*

My first day in Pascagoula, MS was spent learning about the town. Pascagoula is a port city with a historic shipyard. Pascagoula is home to the state’s largest employer, Ingalls Shipbuilding, the largest Chevron refinery in the world, and Signal International, an oil platform builder. Prior to World War II, the town was a small fishing community, but the population jumped with war-driven shipbuilding. The city’s population peak in the late 1970s, but today, there are less than 25,000 in the area. Pascagoula continues to be an industrial center surrounded by the growing tourism industry across the Gulf region to the east and west of the port. The population also declined when Naval Station Pascagoula was decommissioned in 2006. The old naval base is located on manmade strip of land called Singing River Island and is in the middle of the port. The port still maintains a large Coast Guard contingent as well as serving as the home portfor the NOAA Ships Gordon Gunter, Oregon II, and Pisces. The NOAA port is actually called the Gulf Marine Support Facility and is located a block from NOAA’s National Marine Fisheries Service Mississippi Laboratory.

October 14, 2018October 15, 2018

Andria Keene: Steaming and Dreaming in Safety, October 12, 2018

NOAA Teacher at Sea

Andria Keene

Aboard NOAA Ship Oregon II

October 8 – 22, 2018

Mission: SEAMAP Fall Groundfish Survey

Geographic Area of Cruise: Gulf of Mexico

Weather Data from the Bridge
Date: 2018/10/12
Time: 14:58:22
Latitude: 27 37.15 N
Longitude 091 23.21 W
Barometric Pressure 1015.69mbar
Relative Humidity 60 %
Air Temperature: 27.1 0C

Everyone is an explorer. How could you possibly live your
life looking at a door and not open it? – Robert Ballard

Science/Technology and Personal Log

Hurricane Michael brought a three day delay to our departure. At first, I was a little disappointed that we were not setting sail right away but now I am glad because I had some extra time to explore Pascagoula, familiarize myself with the ship, and slowly meet the crew as they arrived spread out over several days. Plus, the additional time allowed me to start working on my career lesson plan and to prepare a video tour of the ship. I will upload the video to this blog page as soon as it is complete.

Photo collage — #1 – My first tour of Oregon II #2 – Hurricane Michael arrives in the center of where I am and my hometown of Tampa #3 – Exploring Round Point Lighthouse #4 – My first sunset aboard.

On Thursday, Oct 11th at 9:00am, we departed from Pascagoula and headed out into the Gulf of Mexico. I was amazed at how quickly we lost sight of land and at the vastness of this body of water with which I thought I was so familiar. My favorite part was watching the color of the water change from a dark teal to a deep blue.

The various colors of the water of the Gulf

On the “Plan of the Day” board under schedule it reads “Steam and Dream til Saturday Afternoon” and that is just what we are doing. Our path will lead us north of the Mexican border and south of Corpus Christi, Texas, where we will find our first station. Until then, in between steaming and dreaming, we are getting to know each other and learning about our roles and responsibilities.

For example, today we practiced our Fire and Abandon Ship Drills. While it is a little nerve-racking to think that something like that could actually happen, it was reassuring to see that everyone was well-trained and the operations ran smoothly.

My first lesson plan will focus on careers available through NOAA. It is amazing to see the variation in the positions and the backgrounds of the workers on this ship. Basically, on the Oregon II there are three types of employees who make up the ship’s complement.

Types of Employees — This graphic illustrates the structure of the employees aboard Oregon II.

I feel like NOAA has something to offer everyone from entry level positions that require no experience to positions requiring years of experience or advanced college degrees. The best part is that no matter where you start there is always room to advance through hard work and certification. I can’t wait to share all the opportunities with my students!

Did You Know?

Oregon II has a reverse osmosis system that uses salt water to create the freshwater needed aboard. The salt that is removed is returned back to the Gulf.

Challenge Question of the Day
(For my students: bonus points for the first person from each class period to answer it correctly):

This picture was taken from the screen of one of the navigation systems on the bridge.

What do you think is represented by each of the black squares with a dot inside?

Animals Seen Today:

Moon Jellyfish and Flying Fish

September 6, 2017September 7, 2017

Susan Brown: Getting Acclimated, September 3, 2017

NOAA Teacher at Sea

Susan Brown

Aboard NOAA Ship Oregon II

September 2 – 15, 2017

Mission: Shark/Red Snapper Longline Survey
Geographic Area of Cruise: Gulf of Mexico
Date: September 3, 2017
Weather Data from the Bridge

Latitude: 30degree06.7N
Longitude: 88degree17.6W
Sea wave height: <1
Wind Speed: LT
Wind Direction: VAR
Visibility: 10NM
Air Temperature:
Barometric Pressure:
Sky: BKN

Incomplete weather data as we were docked.

I’m currently sitting on the Oregon II docked in Pascagoula, Mississippi after a long travel day. It’s eerily quiet as the ship disembarks tomorrow at 14:00 and the majority of the crew will arrive tomorrow. I am enjoying the slow introduction to this ship and finding my way around. The OOD (Officer Of the Deck) gave me a tour of the ship that I will be working on for the next two weeks. The majority of crew is on shore for the Labor Day weekend but will return tomorrow as we disembark and head towards Florida. Our plans have changed due to Hurricane Harvey and debris that may be in the waters making the travel in those waters unsafe.

Science and Technology Log

Due to Hurricane Harvey, the area being surveyed has changed so that we are heading East instead of West to pick up the third leg of this survey that ended off the coast of Florida last week. I have been assigned the day shift from noon to midnight and will be assisting the science crew. The mission of this survey is to monitor interannual variability of shark populations of the Atlantic coast and the Gulf of Mexico. Additionally aboard are two scientist that are on board are studying parasites that these animals carry. Carlos and Brett, the two parasitologists, were on the second leg right before I joined. Their leg started on the tip of Florida and ended where we will start.

Personal Log

Wearing “the patch” to keep from getting seasick

Seasick? Felt a little queasy after my first night in dock! Decided the best course of action was to take some medicine, eat a big meal and hydrate to help get my sea legs. Everyone has been friendly and welcoming as we get started. The night crew starts tonight at midnight till noon and the day crew, where I am been placed, will start at noon. Hoping for a good night’s sleep!

Did You Know?

Sharks have been around since the dinosaurs approximately 450 million years ago.

Question of the day

What is NOAA’s mission statement? (Hint: Google NOAA and select “About Our Agency” at the bottom)

June 9, 2015August 21, 2021

Heidi Wigman: Fisheries Sciences, June 8, 2015

NOAA Teacher at Sea
Heidi Wigman
Aboard NOAA Ship Pisces
May 27 – June 10, 2015

Mission: Reef Fish Survey
Geographical area of cruise: Gulf of Mexico (24°29.956’N 083°320.601’W)
Date: June 8, 2015

Weather: 83° @ surface, E-SE winds @ 10-15 knots, seas 2-3 ft, average depth 123m

Science and Technology Log:

NOAA’s mission is three-fold: science, service, and stewardship. By utilizing fisheries, hydrographic, and oceanographic scientists in the field, NOAA’s goal is to understand and predict changes in climate, weather, oceans, and coasts, while also putting forth a conservation effort towards coastal and marine ecosystems. This knowledge is shared with businesses, communities, and people, to inform on how to make good choices to protect our fragile earth.

The specific mission, for our current voyage, on the Pisces, is to survey fisheries at pre-determined sites throughout the Western portion of the Gulf of Mexico. The data from these surveys will be brought back to the lab in Pascagoula, Miss. and analyzed. Then determinations will be made for future surveys and studies. According to Chief Scientist, Brandi Noble, “These fishery independent surveys increase our knowledge of natural reefs in the Gulf of Mexico. We get a better picture of what’s down there and work with outside agencies to determine how to maintain the health of the fisheries. Data gathered will be used in future stock assessments for the Gulf of Mexico.”

The methods used to gather data on this cruise are through the use of the camera array and the bandit reels. The camera arrays are deployed at sites that have been mapped and sit at the bottom for a total soak time of 40 minutes. This footage is analyzed and processed by scientists to determine what the conditions of the reef are and the species of fish present in the area and their abundance. This gives a partial picture, but to get a complete and accurate report, fish need to be studied more closely. The “Bandit Reels” provide a more hands-on approach and allow the scientists to get data on sex, maturity stage, and age of species. Some of the fish are released after some initial measurements, but the commercially important species are dissected and samples are taken for further lab analysis. Initial measurements made with anything brought aboard include total length (TL), fork length (FL), standard length, SL (from nose to caudal fin), and weight.

Removing the otolith to determine the age of the fish

removing organs to determine sex and maturity — Removing organs to determine sex and maturity

A closer look at the data allows scientists to make predictions on fish populations and growth over time. Some of the data we got on this trip were for the Lutjanus campechanus (red snapper) and for the Pagrus pagrus (red porgy).

sheet1 — Lutjanus campechanus “Red Snapper”

There are several ways to disaggregate the data to determine differences and similarities based on region, time, species, etc. For our purposes, we’ll make some observations involving probability, proportion, and statistics.

Math Problem of the day: You are a scientist and have brought data back from the Gulf of Mexico to analyze in your lab. You have three tasks: a) to get an average fish size based on weight (species specific) b) to determine what the proportion is of the Standard Length to the Total Length of each species (hint: ratio of SL/TL; find average) c) determine the theoretical probabilities that the next Red Snapper will be >1,100g, and that the next red Porgy will be <1,000g (hint: how many times does this happen out of the total catches?)

Coming Soon . . . Meet some of the crew behind the Pisces

Previous Answers:

Trigonometry of Navigation post: 18 m/s @ 34°SE

Bandit Reels post: about 14.6 nautical miles

The STEM of Mapping post: layback = 218m, layback w/ catenary = 207m

Underwater Acoustics: about 163 sq. meters

SCUBA Science: letter group A

March 18, 2015August 21, 2021

Julia West: In Port in Pascagoula, MS, March 17, 2015

NOAA Teacher at Sea
Julia West
Aboard NOAA ship Gordon Gunter
March 17 – April 2, 2015

Mission: Winter Plankton Survey
Geographic area of cruise: Gulf of Mexico
Date: March 17, 2015

Personal Log

I made it! A smooth flight down to Mississippi (which is a new state for me – I’ve never been here). I arrived to sunshine and warm temperatures – OK, downright hot to me, but I’ll get used to it quickly I’m sure. Pamela Bond, the chief scientist on this cruise, met me at the airport and brought me out to the Gordon Gunter. I quickly learned that it is not only Pam who is super nice and welcoming, but the entire crew. I’ll be introducing them more in future posts.

The ship is not at the usual port near the NOAA lab, but at the former naval station, on an island at the mouth of the Pascagoula River. This yard has multiple uses now, as you can see from the pictures below. So not only is the Gunter here, but it has the company of a Coast Guard vessel, and both are dwarfed by a massive oil rig. On the other side of the pier (not pictured) is a USGS vessel and others. There’s a lot going on here!

Gunter, CG vessel, and oil rig — The Gordon Gunter (right) and Coast Guard vessel dwarfed by the huge Sovereign Explorer (oil rig), an old rig that has been docked here for about a year, waiting for bids to take it apart for scrap .

Across the way is Pascagoula’s largest employer, and Mississippi’s largest manufacturing employer, Ingalls Shipbuilding, with 11,000 employees right here in Pascagoula! I can see ships in various stages of construction.

Ingalls 1 — Ingalls shipyard, 1-4 from left to right

Ingalls 4 — That’s a lot of ship building!

I have learned a lot about this area in the one day here at port. Two major events have happened here in recent years – Hurricane Katrina (2005) and the BP oil spill (2010). Both events simply ravaged this area. Everywhere we have been in the last day – the naval station, the NOAA lab, the highway – was under several feet of water during Katrina. You’ve seen the pictures. To hear about it from the folks here is profound. The BP oil spill (also known as Deepwater Horizon oil spill), another devastating event, changed the whole NOAA season (as it did for the fishermen and just about everyone else here). All the NOAA ships on the east coast, and one from the west coast, had to cancel their season’s research and congregate down here to be involved as needed, looking for oil, looking for marine mammals, etc. Today we visited the NOAA lab, where several employees are analyzing plankton samples taken from the affected waters. This is five years later, and still very relevant and ongoing data collection! (sorry, forgot to bring my camera to the lab, but I got to check out lots of plankton under the microscope).

Backing up now, to my arrival: Pam showed me to my room – I’m surprised that I have my own room! It has a refrigerator, closet, desk, comfy chair, my very own sink, and a shared bathroom with the room next door. And it has a TV – I barely know how to use a TV!

And then Tony, the ET (electronics technician) gave me a tour of the boat. Since then, I have been wandering around, sometimes in circles, trying to figure out the layout. I can tell right away that the food is going to be amazing.

My head is already spinning with some of the details about the equipment and technology. Pam was not sure if we would be launching on time – everything has to be just perfect for a research cruise to start, and if there are any issues, we don’t go. There were two repairs that needed to be made since the ship came to port just two days ago: one had to do with the unit that makes our water, by distilling seawater (very important!), and the other had to do with a malfunctioning gyro, or gyrocompass, needed for navigation (also important!). I wanted to know more about how a gyrocompass works, so I first looked it up on Wikipedia, and then talked to Dave Wang, the NAV (navigations officer). It’s so fascinating – a compass that points true north partly by using the rotation of the Earth. The good news is that both of the repairs are done and we will be launching on time!

I just want to share one bit info about a simple piece of equipment on the aft deck. It’s a water tank. I asked Tony what it’s for, when we have the technology to make fresh water. Well, after the oil spill, getting fresh water was a problem, so the tank was added. It was decided that it was convenient to have after it was no longer needed, and is now used for things that need a freshwater wash.

I am wrapping up this blog post now, a day after I started it. I’ve had my safety and ship protocol briefing, and we are underway. We’ve passed the barrier islands, and the ship is starting to rock a bit. Here we go! We have another 5 hours or so to go to get to our first sampling station, so the science work will start tonight. One final photo – to get out of the tight spot we were docked in, a tugboat was necessary:

Tugboat — The tug getting ready to help us leave the dock. At first it held the stern of the ship in place while our bow thrusters pivoted the front, and then it pulled us out.

Word of the Day (time to start learning the terminology):

Neuston – the organisms that are found on the very top of the water, in the surface film. Contrast that with plankton, which can be said to be found within the water, not always right at the surface.

July 13, 2014August 21, 2021

Andi Webb: At Sea on the Oregon II, July 12, 2014

NOAA Teacher at Sea
Andi Webb
Aboard NOAA Ship Oregon II
July 11 – 19, 2014

Mission: SEAMAP Summer Groundfish Survey
Geographical Area: Gulf of Mexico
Date: July 12, 2014

Weather Data: 28 Degrees Celsius 76 Percent Humidity
Wind Speed: 6 knots
Lat/Lon: -86.100708, 30.0353069
Science and Technology Log

Arriving in Mobile, Alabama was exciting as I was picked up from the airport and driven to Pascagoula, Mississippi. Kim Johnson, the Research Fishery Biologist and Field Party Chief, was ready to greet me and quickly showed me all around the Oregon II. I must say it’s quite impressive! Her excitement was contagious as we began this adventure. We participated in safety drills because safety certainly must come first!

DSCN4704 — Safety First on the Oregon II

This is the orange "Gumby" suit that will keep you warm in the event of an abandon ship emergency. The safety drills occurred after departure to sea. — This is the orange “Gumby” suit that will keep you warm in the event of an abandon ship emergency.

While sorting plankton from algae and preparing the plankton to be placed in labeled jars, we found these two little guys!

DSCN4710 — Some unexpected little guys while sorting plankton

After a long day of meeting everyone and getting settled in my stateroom on the Oregon II, it was time to get some sleep in my bottom bunk.

August 7, 2013August 19, 2021

Julie Karre: Heading Back to Land… August 5-6, 2013

NOAA Teacher at Sea
Julie Karre
Aboard NOAA Ship Oregon II
July 26 – August 8, 2013

Mission: Shark and Red snapper Longline Survey
Geographical Range of Cruise: Atlantic
Date: Monday August 5 – Tuesday August 6, 2013

Weather Data from the Bridge
Monday – NE WINDS 10 TO 15 KNOTS
SEAS 2 TO 3 FEET
DOMINANT PERIOD 6 SECONDS

Tuesday – E WINDS 10 TO 15 KNOTS
SEAS 3 TO 4 FEET

Science and Technology Log

Meet the Scientists

Meet some of my favorite people in the world. Without these people my experience would have lacked the learning and laughter that made it such a joy.

Kristin Hannan

Kristin was the Field Party Chief for the first and second legs of the Longline survey. She was also my watch leader, which meant she was by my side in support every step of the way. And as I progressed as a shark handler, she was there with a high five every time. I hit the jackpot landing on a ship with Kristin. She is now off to visit Harry Potter World (I’m so jealous I can hardly stand it) before rejoining the the survey when it leaves Mayport. This is Kristin’s fifth year doing the Longline Survey. The first time she did it, she was a volunteer just like us. I wish Kristin the best of luck in all she does and hope to call her a friend for years to come.

Amy Schmitt

Amy is a research biologist out of the Pascagoula-based fisheries lab. She has been with NOAA for two years, but has been working in research biology for most of her career. She is a native of Colorado and shares my blond hair and fair complexion. We could usually be found together cooling off in the dry lab as often as possible. It was also Amy who coined one of my nicknames on the cruise – Data Girl. According to the science team, the Teachers at Sea make excellent data recorders. I can’t imagine why 🙂

Amy and I work together to process an adolescent Tiger Shark. Amy and I often worked together and truly enjoyed our time together.

Lisa Jones

Lisa has been doing the Longline survey for 16 years now. She is a wealth of information about sharks, living aboard a ship, and marine life. She is also a passionate dog lover, which many of the volunteers shared with her. Lisa will be taking over the duties of Field Party Chief for the third and fourth legs of the survey. She will be aboard the Oregon II for all four legs of the survey this year. That’s a lot of boat rocking!

Mike Hendon

Mike is a research biologist out of the Pascagoula-based fisheries lab. He’s a seasoned veteran of the Longline survey and was a great mentor for those of us new to the shark-handling community. Mike also has two adorable kids and two cute dogs waiting for him at home. He was part of the science team for the first leg of the survey. He can sometimes be found wearing mismatched socks.

Mike and Volunteer Claudia Friess work on Atlantic Sharpnose.

Personal Log

My final days are winding down and I am caught (no pun intended) off guard by how much I am going to miss this. There is such a peacefulness that comes from the rocking of a boat, especially if you don’t get seasick. And working alongside people who share a passionate nature – we may not all be passionate about the same things, but we are all passionate – is such a reinvigorating experience. These two weeks gave me an opportunity to talk about my environmental science integration in my classroom with people who care very much about environmental science. It was so inspiring to have them care about what I was doing in my classroom. It gives me another reason to trust the importance of what I’m doing as well as more people I want to make proud.

Fun list time! Things you get used to living on a ship:

Noise. There is so much happening on a ship, from the engine to the cradle pulling up a shark. It’s all loud. But you get used to it.
Sneaking into your stateroom as silently as possible so you don’t wake up your AWESOME roommate Rachel.
NOAA Corps Officer ENS Rachel Pryor steering the Oregon II during a morning haul back.
Waiting. There’s a lot of waiting time on a survey like this. You find ways to make that time meaningful.
The night shift waiting in anticipation as Lead Fisherman Chris Nichols begins to bring in the line.
Rocking. Duh.
Taking high steps through doorways. The doors that separate the interior and exterior of the ship are water tight, so they don’t go all the way to the floor. You can only bash your shins in so many times before it becomes second nature.
Sharks. I said in a previous post that this survey has been eye opening and it’s worth sharing again. I don’t have a marine science background and I had fallen victim to the media portrayals of sharks. I had no idea that there were sharks as small as the Sharpnose that can be handled by such an amateur like myself.
This is what it feels like when you successfully (and quickly) unhook a shark! VICTORY! Volunteer Kevin Travis is victorious.
Sunsets. Words cannot describe the colors that make their way to you when there’s uninterrupted skyline. Oh I will definitely miss those sunsets.
One of the last sunsets for the first leg of the Oregon II.
The stars. I live a life of being asleep by 10pm and up at 6 am and often times forget to look up at the stars even on the nights when I might have been able to see them. These two weeks gave me some of the darkest nights I’ve had and some of the best company in the world.

Dolphins escort the Oregon II back towards land on its final day at sea for the first leg of Longline. Photo Credit: Mike Hendon — Dolphins escort the Oregon II back towards land on its final day at sea for the first leg of Longline.
Photo Credit: Mike Hendon

July 31, 2013August 19, 2021

Julie Karre: A Day of No Fishing is Not a Day of Rest, July 27, 2013

NOAA Teacher at Sea
Julie Karre
Aboard NOAA Ship Oregon II
July 26 – August 8, 2013

Mission: Shark and Red snapper Longline Survey
Geographical area of cruise: Gulf of Mexico, Atlantic
Date: July 27

Weather Data from the Bridge
W TO NW WINDS 5 TO 10 KNOTS
SEAS 1 TO 2 FT.

We departed Pascagoula yesterday with calm winds and steamy temperatures. Our team decided that with storms developing in and around the Gulf, it was best for us to head out to the Atlantic. So we’re all loaded in to hang out for a few days before the fishing begins.

Science and Technology Log

It would be easy to think of these traveling days as days of rest. But they are far from it. The ship’s crew and fishermen are hard at work each day keeping the ship running as it should. One of the tasks the fishing crew is responsible for is dealing with the rust that builds up on the ship. (Ok, seventh and eighth graders – why is rust such a problem for a ship?)

Because of the constant moisture, rust is a persistent problem on the ship, exacerbated by the salt. Whenever docked, the crew works tirelessly to get the ship into prime condition. Any of the deck equipment that can be removed gets taken to a workshop where it is sanded down to raw metal again and then galvanized. This increases the life of the equipment because galvanized steel doesn’t rust. That leaves all the parts that cannot be removed to be touched up piecemeal, as Lead Fisherman Chris Nichols said. On a day like today – calm sea, light wind, and no fishing – the guys set to work on designated areas of the ship. Once an area of rust is identified, the rust must be removed. After removing the rust and vacuuming up all the dust and particles, the area gets primer painted twice and then its topcoat. The end result is a nice clean look to the boat.

Opening on the starboard side of the ship getting its rust removal makeover.

Removing rust from the railing on the starboard side. — Skilled Fisherman Mike Conway removing rust from the railing on the starboard side.

In addition to keeping the ship in tip-top shape, it is essential to make sure all of the equipment used during the survey works appropriately. Around 9:40am, the Oregon II stopped moving and deployed a CTD unit (conductivity, temperature, depth). These cylinder shaped units carry tanks that bring water samples back to the ship from designated depths while the sensors read the water for its temperature, depth, and salinity.

Alongside the crew hard at work, the science team is busy doing work on sharks that came with us from Pascagoula. According to scientist Lisa Jones, some of these sharks are from surveys done to collect sharks following the BP Oil Spill in the Gulf in 2010. Others are sharks that needed further identification and information from surveys like the one I am on. Each shark is weighed and measured, sexed, and then internal organs are removed for further analysis, tissue samples are taken, and the remains of the shark are thrown overboard to reenter the food chain.

Mike recording data as Lead Scientist Kristen Hannan dissects a Gulper Shark from a previous survey. — Scientist Mike Hendon recording data as Lead Scientist Kristin Hannan dissects a Gulper Shark from a previous survey.

During this down time I was treated to a visit to the bridge, where officers steer the ship, among other things. NOAA Corps Officer LTjg Brian Adornato was on duty and offered me a glimpse of the technology that keeps us headed in the right direction. The Oregon II has one propeller controlled by two engines, which are both running while we steam across the Gulf. The boat was on its version of autopilot while I was visiting, which means the navigational heading is programmed and the boat is steered on that heading automatically. Whether steered by hand or computers, the ship is rarely perfectly on its heading. (Come on seventh and eighth graders – what factors are also influencing the ship’s movement?)

All of the navigation equipment driving the Oregon II.

The wind and water are factors in how close the ship’s course over ground is to its heading. The waves, currents, and wind are all pushing the ship.

Personal Log

While the ship is buzzing with work, there is also lots of time to sit and share stories. I feel very lucky to be aboard the Oregon II at all, but to be aboard with such welcoming and friendly people feels like I hit the jackpot.

I share a room with NOAA Corps Officer ENS Rachel Pryor. She is on duty from 8 am – noon and from 8 pm to midnight. During those hours it is her job to drive the ship. I am on duty from noon to midnight, but during these days prior to fishing, I have a lot of free time. I have been reading, taking pictures, and hanging out with the others. The sleeping on the ship is easy and comfortable. And the food is delicious. Chief Steward Walter Coghlan is an excellent cook.

Some of the things that have caught me off guard should make perfect sense to my lovely seventh and eighth graders, like why I had a blurry camera. (Ok, kiddos – the ship is an air-conditioned vessel kept at cool temperatures to relieve the crew and scientists from the heat of the Gulf. What happens if you keep your camera in your room and bring it out onto the hot deck to take pictures?)

CONDENSATION! The cool glass of the lens becomes immediately foggy with condensation from the high temperatures outside.

It only took me one time of making that mistake and missing some great pictures because of it to learn my lesson. I now keep my camera in a room closer to the outside temperature so it’s always ready to take pictures – like this one of me in my survival suit! I’m also thrilled I didn’t miss the sunset.

The Abandon Ship drill requires everyone on board to get into a survival suit. It's not easy. — The Abandon Ship drill requires everyone on board to get into a survival suit. It’s not easy. – Photo Credit: Skilled Fisherman Chuck Godwin.

A beautiful sunset on my first night out at sea.

The sunset glistening on the calm water the second night.

Did You Know?

Fathoms are a unit of measurement commonly used to measure the depth of a body of water. One fathom is exactly six feet.

Animals Seen

Flying Fish

Pilot Whales