Steven Wilkie: July 3, 2011

NOAA TEACHER AT SEA
STEVEN WILKIE
ONBOARD NOAA SHIP OREGON II
JUNE 23 — JULY 4, 2011

Mission: Summer Groundfish Survey Geographic Location: Northern Gulf of Mexico Date: July 3, 2011 Ship Data

Latitude 29.27
Longitude -94.39
Speed 9.30 kts
Course 298.00
Wind Speed 6.70 kts
Wind Dir. 281.88 º
Surf. Water Temp. 29.90 ºC
Surf. Water Sal. 24.88 PSU
Air Temperature 29.30 ºC
Relative Humidity 75.00 %
Barometric Pres. 1015.75 mb
Water Depth 15.70 m

Science and Technology Log

One of the first expeditions devoted to the study of the world’s oceans was that of the H.M.S. Challenger.  This voyage covered a distance of more than 68,000 nautical miles.   Although other expeditions prior to the Challenger expedition would periodically collect data about the ocean environment, none were devoted solely to the exploration of the chemical, biological and physical attributes of the oceans.

The Voyage of the HMS Challenger
The HMS Challenger’s voyage spanned 4 years and covered close to 70,000 nautical miles.
A sounding device used by the Challenger expedition. This weighted line would be lowered over the side of the ship and the amount of line let out would indicate depth.

If you have read my previous posts, you know how important monitoring the abiotic factors are.  This was no different aboard the Challenger expedition.

And remember it took 23 years to process and publish all of the data, well with the help of computers and the internet, the Oregon II’s data is available in hours.

Michael Hendon (lead scientist) performs a winkler titration to determine dissolved oxygen content. See wet chemistry skills are still important!
Michael Hendon (lead scientist) performs a winkler titration to determine dissolved oxygen content. See wet chemistry skills are still important!

Although technology plays a pivotal role in collecting and analyzing the data, computers still need to be cross referenced against tried and true scientific processes.  In order to ensure that all of the CTD equipment is accurate, random water samples are pulled using the CTD’s sample bottles.  A chemical titration, known as the Winkler titration is used to determine the amount of dissolved oxygen present in the water samples.

The method for sampling the living organisms along the bottom of the seafloor has not changed much since the Challenger expedition.  Trawl nets are still the name of the game, although the way they are deployed might vary a bit!

Mike and Cliff bring the Oregon II's trawl aboard complete with catch.

Once the catch is on board, the process begins to collect data (remember that is why NOAA is out here) to better understand how populations are changing in order to set catch limits and analyze human impact.  In the day’s of the Challenger expedition, the work of analyzing samples and collecting their would have been done in a lab aboard ship, and we rely on similar if not more automated facilities onboard the Oregon II.  Follow this link to take a virtual tour of the Challenger’s “Wet lab”. The wetlab onboard the Oregon II is where I spend the majority of my 12 hour watch.   It is here that the catch is brought after we bring it on deck, we sort the catch, count and measure a subsample of what is brought on board.  If we had to measure everything that came up with the net we would never get finished.  By taking a subsample we can split the catch into percentages depending on the weight of the entire catch and count a smaller sample of the catch.  This subsample’s diversity can then be used as a basis for the entire catch.  This saves time and effort on our part and still provides an accurate representation of what was in the net.  A few species are selected to be counted in their entirety, that includes all commercially important shrimp (brown shrimp, pink shrimp and white shrimp) and all red snapper.  We will also pull organisms into our subsample that are unique to the catch such as sharks, rays, skates etc.

Now I am not quite sure how the Challenger expedition determined where it would sample and when, perhaps if they saw something interesting they would simply drop their nets in the water, but with the Oregon II, the sampling sites are predetermined and the method to set up those sites is quite sophisticated.  In order to ensure that the cruise covers the majority of the Gulf of Mexico NOAA uses a method known as independent random sampling.  This method uses a computer program to randomly select stations based on depth data, and spatial area.  By choosing random samples independently, the scientists can rest assured that they haven’t purposefully singled out an area with “good fishing” or “bad fishing” and that the data they collect will represent a more accurate count of the actual fish populations in the Gulf of Mexico.

Scott Sperber, July 16, 2009

NOAA Teacher at Sea
Scott Sperber
Onboard Research Vessel Kilo Moana
July 9-17, 2009 

Mission:Woods Hole Oceanographic Institution Hawaii Ocean Time series Station; Albert J. Plueddemann, Chief Scientist
Geographical area of cruise: Central Pacific, north of O’ahu
Date: July 16, 2009

Weather Data from the Bridge 
Temperature: 22.64 C
Humidity: 80.6%

Science and Technology Log 

I am up very early today, 0530, the last full day at sea.  I did not make a log entry yesterday it was a very busy day. The day totaled a full 12 hour hard work day for me.  The day started out a about 0545 with the initial recovery of the old buoy.  The acoustic (sound) release mechanism was triggered and the glass balls cam up to the surface with the rope attached.  The glass balls were in a large cluster once onboard and had to be untangled.

Glass balls coming onboard (left) and popped glass ball (right).
Glass balls coming onboard (left) and popped glass ball (right).

Five of the glass balls have imploded at some time and the glass that had remained had turned into a fine white powder.  After the glass balls were brought onboard and untangled and put into their boxes the chore of bringing the 5 miles of line and cable began.  I started out in the box to flake (lay the rope down) the line as it came in.  After quite a while and a lot of rope the capstan (the vertical winch) broke. It was the only break I had since we began. A break when the brake broke. LOL. The line was cut and placed on the main winch to complete the process.  This slowed the whole procedure down because once the rope was on the winch; we had to unwind it all into its storage boxes. This had to be down 2 times and it set the whole recovery procedure behind about 2 hours. If you remember the procedure of deploying the new buoy, one chain link section at a time with the sensors attached, this procedure was now reversed for the recovery.

Scott in the box (left) and Scott on deck (right).
Scott in the box (left) and Scott on deck (right).

When the sensors came up each one was taken into the lab, photographed, videoed and a narrative was taken on to the condition of the sensor including what type of marine (ocean) growth had taken place over the year. I was given the task of taking the sensors into the lab, hanging them for photographic purposes and then bring them back outside.  A dirty job but some one had to do it. This process from start to finish, recovery of the buoy to the end of documenting the condition of the sensors took 10 hours.  After this the real fun started, cleaning the sensors. Now we are talking dirty. We had to clean off all marine growth from the sensors so Jeff could then start recovering data. 

Personal Log 

Well today I was able to put on my new steel toed boots. I should have broken them in a couple of times before this; my feet ached at the end of the day, wore a hard hat all day, a safety vest, got to climb into a box with miles of rope, got to smell like an old aquarium.  All and all a great day. Sure didn’t need to ride the bike, Carly passed on it too.

Jeff and the sensors in the lab (left) and dirty sensor with goose barnacles (right).
Jeff and the sensors in the lab (left) and dirty sensor with goose barnacles (right).

All this said and done I would really like to take the time to thank all the people who made this possible. I have done many things in my professional career to broaden my professional knowledge and this has got to be one of the best experiences of all.  First and utmost I would like to thank the NOAA Organization.  Without their desire to stress the importance of Science education through increasing the knowledge base of the educators of the world this would not have been possible. Thank you to Dr. Al Plueddemann, Chief Scientist, Dr. Roger Lukas and Dr. Fernando Santiago, both of the University of Hawaii. Not only did they share their wealth of knowledge with me but guided me through the practices of this WHOTS project and confirmed in me my beliefs of the importance of long term research in science.  Thank you to the rest of the Science Party. You all put up with me and showed me how to do what you needed.  Thank you to the Captain and the crew of the R/V Kilo Moana.

The R/V Kilo Moana (left) and Dr. Plueddeman, Paul Lethaby, Sean Whelan and Dr. Roger Lukas (right).
The R/V Kilo Moana (left) and Dr. Plueddeman, Paul Lethaby, Sean Whelan and Dr. Roger Lukas (right).

What a great experience. Thank you to my principal, Robert Weinberg, at Sherman Oaks Center for Enriched Studies and to my students. Keep it up kids, it is you that make SOCES number one.  I would also like to thank my wife.  Without her encouragement and enthusiasm towards our profession, she is also a teacher, I don’t know if I would have applied.  She is my inspiration.  Thank you one and all for allowing me to participate in this career and life enriching experience.

I see skies of blue….. clouds of white Bright blessed days….dark sacred nights And I think to myself …..what a wonderful world

~ Louis Armstrong

Folks on the ship take in the beautiful Hawaiian sunset…
Folks on the ship take in the beautiful Hawaiian sunset…

Scott Sperber, July 14, 2009

NOAA Teacher at Sea
Scott Sperber
Onboard Research Vessel Kilo Moana
July 9-17, 2009 

Mission:Woods Hole Oceanographic Institution Hawaii Ocean Time series Station; Albert J. Plueddemann, Chief Scientist
Geographical area of cruise: Central Pacific, north of O’ahu
Date: July 14, 2009

Weather Data from the Bridge 
Temperature: 23.66 C
Humidity: 76.34%

R/V Kilo Moana
R/V Kilo Moana

Science and Technology Log 

Today is another slow scientific day today. So today I am doing some other type of scientific learning, some local marine biology.  Today I am learning about how to fish in the local Hawaiian Islands style.  Breeze Simmons, research associate student level 1, is showing me all of his riggings for various types of fish and fishing conditions.  He is even rigging up something for me so I might have an opportunity to try to catch something later today or tomorrow. I have learned that Mahi has eyes like humans and they can see up to the surface.  They are a very strong food source in the ocean the world record is close 86 pounds and that only took about 18 months of growth. Mahi mahi is also known as the dolphin fish, not to be confused with “Flipper” of dolphin fame, also known as Dorado.  Ahi is tuna, Ono is Wahoo. There are also Marlin and Aku, a member of the mackerel family.

Breeze setting up gear for fishing
Breeze setting up gear for fishing

I am also sharing the Pacific Ocean with Hurricane Carlos. It’s a big ocean out here and I have not felt any effect from it and we don’t plan to.  Carlos is still off the coast of Mexico now. This is so cool to be on board this ship with all these experts and to be adding to my knowledge. The meteorologists on board say that if Carlos comes close to Hawaii its strength will die out (lose its energy). The weather balloon launches are continuing on schedule every 4 hours with Tom and me taking the 0700 and 1100 launches. Tomorrow promises to be a very hectic day aboard ship.  We will be recovering the old buoy.  Everything will begin at a 0600 and continue all day.

Mahi mahi
Mahi mahi

Personal Log 

Since today is such a mellow day I have taken this opportunity to catch up on some reading, sun, listening to music and continue by bike riding.  It has now become a bit of competition between, Carly, one of the very young interns, 25 years young from the University of Hawaii, and me as to who is riding the most miles each day. Today she rode more.

The ship has an onboard DVD system where movies and such are piped into each berth (room) along with scientific information.  I was in my berth and I put on one of the channels and what did I see that someone had put on in the main lounge? It was an episode of National Geographic and who was on the episode but my good friends from UCLAs’ Marine Biology Department, Dr. Bill Hamner and his wife Peggy. Small world, Peggy wrote one of my letters of recommendation for this expedition. They are part of the reason I am so involved in Ocean Sciences.

Today’s Task 

Look up and find a picture of all the fish that were mentioned above. 

Me and Carly
Me and Carly

Scott Sperber, July 13, 2009

NOAA Teacher at Sea
Scott Sperber
Onboard Research Vessel Kilo Moana
July 9-17, 2009 

Mission:Woods Hole Oceanographic Institution Hawaii Ocean Time series Station; Albert J. Plueddemann, Chief Scientist
Geographical area of cruise: Central Pacific, north of O’ahu
Date: July 13, 2009

Weather Data from the Bridge 
Temperature: 24.13 C
Humidity: 72%

Kuhio setting up for fishing
Kuhio setting up for fishing

Science and Technology Log 

The ship moved to the location of the old buoy last night. Visually, what a difference between the two. This one is certainly not the bright yellow color of the new one launched just 3 days ago. Yesterday I mentioned that the two thermometers on the new buoy were not reading identical temperatures and that they were about 0.4 degrees difference.  After asking a few questions I came to be informed that the importance of this particular series of expeditions, WHOTS, is that it is the accuracy of this longevity study that gives it its validity.  NOAA’s value of this study is that the study is an ongoing study not one that collects data brings it back to a lab and analyzes it and that is the end of it.

Science is not a one shot deal.  This is something I have tried to stress with my students over the years.  Good science, good data, is done with multiple sampling, either longevity study or many samples over a shorter period of time.  Any data can happen once but for it to be valid it needs to be substantiated.  For a number of years now the WHOTS study has not only brought back this type of data but has been able to note the small changes in this particular environment.  It has shown how these micro changes, shown over time, have an overall affect on a macro scale. This is the credence of this study is.  The fact that small changes do over a long period of time do show an effect.  The simple fact that the ship stayed on station for 3 days to calibrate the measurements with the new buoy, and then moved to the location of the old buoy shows the effort to make sure that even the most infinitesimal piece of data is made constant and notable.

Fresh Mahi mahi
Fresh Mahi mahi

Today, at this second location, there is being made shallow casts (samplings) with the SEABIRD at depths up to 200m every 4 hours.  These depths are the same depths as those of the instruments on the buoys.  Sometimes during the course of a years study the sensors will have a tendency to drift (change) or jump in their data.  These casts, engineering calibration casts, close to the buoys standardize the CTDs again reading temperature, conductivity, dissolved oxygen and then calculating density. These calibrations of any drifts serve as a comparison over the course of the year and are used to recalibrate the data.  With the recovery of the old buoy, one year worth of data will be downloaded and the similarities of all data with past weather conditions will be analyzed.  Again the sensors that are on the buoy are; MICROCATS, acoustic Doppler current meters and vector measuring current meters.

Personal Log 

Kuhio gave a shot at fishing this morning. Because the old buoy has been in the water for a year it has become a floating reef. So far Kuhio has hooked into and rough aboard 4 Mahi mahi. YUM, fresh fish tonight. I have been told that all over the old buoy and its sensors will be organisms of all types.  Jeff has asked be if I would help scrap off the old sensors.  OH BOY. Dirty smelly job I am sure. 

Scott Sperber, July 11-12, 2009

NOAA Teacher at Sea
Scott Sperber
Onboard Research Vessel Kilo Moana
July 9-17, 2009 

Mission:Woods Hole Oceanographic Institution Hawaii Ocean Time series Station; Albert J. Plueddemann, Chief Scientist
Geographical area of cruise: Central Pacific, north of O’ahu
Date: July 11-12, 2009

Weather Data from the Bridge 
Temperature: 24.2 C

Bringing in the SEABIRD CTD
Bringing in the SEABIRD CTD

Science and Technology Log 

Compared to yesterday today is a very slow scientific day.  After releasing the WHOTS buoy, things really calmed down.  Let me take this opportunity to tell you a bit about some of the instrumentation on the buoy itself.  The overall goal of the project is to collect data about the ocean and atmosphere over a long period of time.  These data will serve to help answer questions about such things as global warming and its impact in the tropics. On the buoy itself, pictured in a previous log, there are instruments that measure temperature, humidity, solar radiation, wind direction and speed. A GPS unit keeps track of the buoy’s location at all times. On the buoy there is also an antenna which transmits data to satellites. Each of the two buoys [explain why there are two in the ocean for this 4-day comparison period] in the water has enough slack in the lines to allow for an approximate 2-mile radius circle.

Profile of CTD on shallow casts
Profile of CTD on shallow casts

The weather balloon launching continues every four hours with teams of two or three taking each launch in shifts. Some CTD casts have been done with the small package SEABIRD CTD.  This is set over the side, lowered down by crane and yo-yoed up and down for about four hours.  During this time, data are sent directly to an onboard computer and collected by the scientists. These data include temperature and salinity. This is important information to assess changes going on in the crucial air/sea interface.

These particular locations, ones where temperature and salinity difference vary worldwide, the thermocline and halocline are dependent on variables such a currents and air temperature.  On the final assent collection bottles are closed to collect water samples for further analysis. With all of this sophisticated instrumentation onboard surface water temperature samples are still taken with the old fashioned method of lowering thermometers into the water several times to take an average reading. Some things never change. The information collected by both the oceanographic crew as well as the meteorological crew aboard is truly showing the links, the association between the interaction of the air and sky, in the crucial air/sea interface.

I found out today that the temperatures on the two thermometers on the WHOTS-6 buoy are not matching. They are off by about 0.4 degrees C; that is the level of precision necessary for this research.  The scientists are looking into which one is closest to the temperatures read on the ship before we move off to the old buoy’s location tomorrow. Apparently, this is not something that can be reconfigured so the scientists need to know which thermometer they can rely on for information. There are two of just about every instrument on the WHOTS buoys. This serves as a backup and a comparison for the same location and enables the greatest accuracy in the data.

Profile of weather balloon sonde
Profile of weather balloon sonde

Personal Log 

I’d like to share a bit more about my onboard life. I have gotten acclimated finding my way around the ship (sort of). Well, at least I don’t get lost going to the mess hall anymore.  I am in a berth on an upper bunk with Jeffrey Snyder, one of the primary researchers from the University of Hawaii. The berth is quite comfortable as berths can go since it has been years since I was in a bunk bed. Various alarm clocks go off at anytime at night so the crew can go on their watch.  There is even a ghost alarm that goes off at 01:15 that Jeff and I cannot locate.  Food is not at a shortage. It seems that every time you turn around it is time to eat, and what great food it is too.  There is fresh salad lunch and dinner, fresh fruit, at least 3 entries to choose from each mea and desserts. LA Fitness here I come. I received what I consider a gift today from Fernando Santiago, one of the principle scientists, a DVD of the procedures that are used on the Hawaii Ocean Time-series Project.

July 12, 2009 

Had some down time today after setting off another weather balloon and a great fruit and yogurt breakfast. Took a 7 mile bike ride. You may ask where in the middle of the ocean you can take a 7 mile bike ride.  They have a nice little fitness room on board.

Words of the day: Mahimahi, calibration, dissolved oxygen, interface, thermocline, conductivity, temperature, depth.