ocean acidification – NOAA Teacher at Sea Blog

August 23, 2024August 27, 2024

Tonya Prentice: NOAA’s CTD and Carousel, August 20, 2024

NOAA Teacher at Sea

Tonya Prentice

Aboard NOAA Ship Henry B. Bigelow

August 8 – August 24, 2024

Mission: Northeast Ecosystem Monitoring Survey

Geographic Area of Cruise: Northwest Atlantic Ocean

Date: August 20, 2024

Weather Data from the Bridge
Latitude: 42.2212 º N
Longitude: 70.29659º W
Wind Speed: NW at 12 mph
Air Temperature: 19.8° Celsius (67.64° F)
Sea Temperature: 19.3 Celsius (66.74° F)

Science and Technology Log

Monitoring Ocean Parameters with NOAA’s CTD and Carousel Bottle Sampler

The CTD and Carousel Sampler are essential tools NOAA uses to monitor ocean conditions. “CTD” stands for Conductivity, Temperature, and Depth, the primary parameters this device measures. By running profiles of the water column from the surface to the bottom, the CTD helps us understand key ocean characteristics. The Carousel Sampler paired with the CTD allows collection of water samples at depth for laboratory analysis.

What Does the CTD Measure?

Conductivity: Helps determine the salinity of the water.
Temperature: Measures the thermal profile of the water column.
Depth: Tracks how deep the CTD is during data collection.

Together, these measurements give us a detailed profile of the water column, helping scientists monitor what we call “the Big Four” parameters.

Carousel: Collecting Water Samples

The CTD and Carousel is equipped with twelve Niskin bottles, which are used to collect discrete water samples from specific depths. The bottles are numbered 1-12, and are “fired” (closed) at different depths to capture water samples.

For example, bottle 1 might be fired near the bottom (a few meters above the seafloor), bottle 2 at 10 meters, bottle 3 at the determined chlorophyll maximum (C Max), and bottle 4 couple just below the surface. Multiple bottles are often fired at each depth to collect additional water. These samples provide critical data about the ocean’s chemical properties at various levels.

view of the carousel sampler resting on the deck of NOAA Ship Henry B Bigelow at night. A white cylindrical metal frame holds twelve gray cylindrical bottles in a round. The bottles have opened stoppers connected at the top and bottom. the CTD probe, at the center of the round, is not visible. Tonya has added yellow text boxes to label the following: carousel, Niskin bottles, top stopper, valves, bottom stopper. — CTD Carousel Bottle Sampler

Preparing the CTD Carousel Bottle Sampler

Before deployment, we ensure that all the stopper valves at the top and bottom of each Niskin bottle are closed. We also hook the wires at the top and bottom to prepare the bottles to open at the designated depths. Once the CTD is ready, it is carefully lowered into the water, beginning its descent through the water column.

Analyzing the Key Parameters

Once the water samples are retrieved, we focus on analyzing these key parameters:

Dissolved Inorganic Carbon (DIC)
pH
Total Alkalinity (TA)
Nutrients
Chlorophyll

view of a large scientific instrument, a cylindrical metal frame containing a round of tall dark gray sample bottles, suspended over the rail of a ship. The sky and the water are both a dark blue, fading into one another at the horizon. — Lowering the CTD into the water.

photo of a computer monitor displaying a graph; the graph itself is not really readable — Lowering the CTD into the water.

Storing the Samples

After processing, the nutrient and chlorophyll samples are stored in a freezer kept at -80°C (-112°F) to preserve them for further analysis. Mercuric chloride is added to the DIC, pH, and TA samples to preserve them until they are measured in the laboratory. These samples provide invaluable insights into ocean health. The DIC, TA and pH samples help us monitor the effects effects of ocean acidification— which occurs when carbon dioxide dissolves into the ocean. The chlorophyll samples measure the amount of phytoplankton living in the water. Like plants on land, microscopic phytoplankton carry out photosynthesis, produce oxygen, and are at the base of the marine food web.

Understanding these parameters allows us to monitor the ocean’s health and better predict how it may change in the future. For more information on ocean acidification, check out this resource: NOAA Ocean Acidification.

By closely monitoring DIC, TA and pH we can track important changes in our oceans, providing critical data for research and conservation efforts.

Personal Log

Life on a 12-Hour Work Shift at Sea

Working a 12-hour shift at sea might sound intense, but there’s often some downtime between stations and even a few hours after the work is done. The time you get can vary depending on how far apart each station is. Sometimes it’s just enough to process samples before heading to the next station, while other times you have several hours to relax and recharge.

So, how do you spend that free time on a ship? There’s no shortage of options. You could enjoy a movie in the lounge area, dive into a good book, play a board or card game with other crew members, or head to the flying deck to spot seabirds and marine life, or simply take in the stunning ocean views. Another interesting way to pass the time is visiting the bridge, where you can see how the ship is navigated, maneuvered, and commanded.

Let’s not forget “Activities and Crafts with Katy,” which can bring a whole new adventure to your day. Today, this included visiting the lab and looking at the different species of marine organisms that have been collected, such as stingray barbs, dogfish, and scallop shells. Katy then showed us how to make our own Acadian Redfish otolith (ear bone) earrings. “Scientists use the ear stones (bones) as a way to age the fish. Also called otoliths, they are bones found right behind the skulls of bony fishes.” (Smithsonian)

The balance of work and downtime can make those long shifts much more manageable and even enjoyable, offering moments to connect with colleagues and the environment around you in a way that few people get to experience.

view of two rows of large brown comfy-looking recliners facing a tv screen mounted on the wall above cabinets. there is a bookcase off to one side. — The Lounge area.

the flying deck - the uppermost deck on the ship - is bisected by the ship's yellow mast. a tall metal frame appears to be shade structure but may serve additional purposes. There are picnic benches and beach lounge chairs. — The Lounge area.

Did You Know?

“One atmosphere is equal to the weight of the earth’s atmosphere at sea level, about 14.6 pounds per square inch” (NOAA Water Pressures at Ocean Depths). Beneath the ocean’s surface, water pressure increases by approximately one atmosphere for every 10 meters of depth.

To illustrate just how intense this pressure can be, we conducted a simple yet fascinating experiment. We decorated 16 ounce styrofoam cups with artwork, then placed them in a mesh bag attached to the CTD Carousel Sampler. The CTD , along with the cups, was submerged to a depth of about 500 meters (1640.42 feet), where the pressure equals roughly 725 pounds per square inch (psi). We repeated this process by submerging the cups to 200 meters (656.17 feet), which equals about 291.18 psi.

As the cups descended into the depths, the increasing water pressure caused them to shrink dramatically because the air inside the cups was compressed. This simple experiment vividly demonstrates how powerful the forces at play beneath the ocean’s surface can be.

three styrofoam cups in a row on a table or desk surface. the leftmost cup is the standard size, undecorated. The middle cup is 30-40% smaller. It's colored with marker to be a flower scene, with "2024" written around the top rim. The rightmost cup is the smallest, probably less than half the size of the original. It says Go Wildcats, August 2024, Henry B Bigelow. — This is a normal size ounce styrofoam cup (left side). Here is the cup after it was submerged 200 m below the ocean surface (middle). The last cup was submerged 500 m and then again at 200 m (right side).

July 24, 2019

Shelley Gordon: A Day on the Back Deck, July 20, 2019

NOAA Teacher at Sea

Shelley Gordon

Aboard R/V Fulmar

July 19-27, 2019

Mission: Applied California Current Ecosystem Studies Survey (ACCESS)

Geographic Area of Cruise: Pacific Ocean, Northern and Central California Coast

Date: July 20, 2019

Weather data: Wind – variable 5 knots or less, wind wave ~1’, Swell – NW 7’@ 10sec / S 1’ @ 11sec, Patchy fog

Science Log

7:39am – We are about to pass under the Golden Gate Bridge, heading west toward the Farallon Islands. Several small fishing boats race out in a line off our port side, hulls bouncing against the waves and fishing nets flying in the wind. I am aboard R/V Fulmar in transit toward data collection point 4E, the eastern most point along ACCESS Transect 4. The TTG (“time to go,” or the time we expect to arrive at 4E) is estimated at 1h53’ (1 hour, 53 minutes), a figure that fluctuates as the boat changes course, speeds up, or slows down.

This is my second day on an ACCESS research cruise. Yesterday I got my boots wet in the data collection methods used on the back deck. The ACCESS research project collects various types of data at specific points along transects (invisible horizontal lines in the ocean). Today we will be collecting samples at 6 different points along Transect 4. With one day under my belt and a little better idea of what to expect, today I will aim to capture some of the action on the back deck of the boat throughout the day.

9:41am – Almost to Station 4E. “5 minutes to station.” This is the call across the radio from First Mate Rayon Carruthers, and also my signal to come down from the top deck and get ready for action. I put on my rain pants, rubber boots, a float jacket, and a hard hat. Once I have my gear on, I am ready to step onto the back deck just as the boat slows down for sample collection to commence. At this first station, 4E, we will collect multiple samples and data. Most of the sampling methods will be repeated multiple times through the course of the day at different locations and depths (most are described below).

deploying hoop net — Dani Lipski and Shelley Gordon deploy the hoop net. *Photo: Rachel Pound*

10:53am – Station 4EX. We finished cleaning the hoop net after collecting a sample at a maximum depth of 33m. The hoop net is a tool used to collect a sample of small living things in deep water. This apparatus consists of an ~1m diameter metal ring that has multiple weights attached along the outside. A 3m, tapered fine mesh net with a cod end (small plastic container with mesh vents) hangs from the hoop. Attached to the net there is also a flow meter (to measure the amount of water that flowed through the net during the sample collection) and a depth sensor (to measure the depth profile of the tow). To deploy the net, we used a crane and winch to hoist the hoop out over the surface of the water and drop the net down into the water. Once the net was let out 100m using the winch, we brought it back in and pulled it back up onto the boat deck. Using a hose, we sprayed down the final 1m of the net, pushing anything clinging to the side toward the cod end. The organisms caught in the container were collected and stored for analysis back at a lab. On this haul the net caught a bunch of copepods (plankton) and ctenophores (jellyfish).

Kate Davis preps samples — Kate Davis fills a small bottle with deep water collected by the Niskin bottle.

11:10am – Station 4ME. Dani Lipski just deployed the messenger, a small bronze-colored weight, sending it down the metal cable to the Niskin sampling bottle. This messenger will travel down the cable until it makes contact with a trigger, causing the two caps on the end of the Niskin bottle to close and capturing a few liters of deep water that we can then retrieve back up at the surface. Once the water arrives on the back deck, Kate Davis will fill three small vials to take back to the lab for a project that is looking at ocean acidification. The Niskin bottle is attached to the cable just above the CTD, a device that measures the conductivity (salinity), temperature, and depth of the water. In this case, we sent the Niskin bottle and CTD down to a depth of 95m.

deploying the CTD — Dani Lipski and Shelley Gordon deploy the CTD. *Photo: Rachel Pound*

12:16pm – Station 4M. Rachel Pound just threw a small plastic bucket tied to a rope over the side of the boat. Using the rope, she hauls the bucket in toward the ship and up over the railing, and then dumps it out. This process is repeated three times, and on the third throw the water that is hauled up is collected as a sample. Some of the surface water is collected for monitoring nutrients at the ocean surface, while another sample is collected for the ocean acidification project.

Rachel Pound throws a plastic bucket over the side railing to collect a surface water sample.

1:36pm – Station 4W. Using a small hoop net attached to a rope, Rachel Pound collected a small sample of the phytoplankton near the surface. She dropped the net down 30ft off the side of the boat and then towed it back up toward the boat. She repeated this procedure 3 times and then collected the sample from the cod end. This sample will be sent to the California Department of Public Health to be used to monitor the presence of harmful algal blooms that produce domoic acid, which can lead to paralytic shellfish poisoning.

2:54pm – The final sample collection of the day is underway. Jaime Jahncke just deployed the first messenger on the Tucker trawl net. This apparatus consists of three different nets. These nets are similar to the hoop net, with fine mesh and cod ends to collect small organisms in the water. The first net was open to collect a sample while the net descended toward ocean floor. The messenger was sent down to trigger the device to close the first net and open a second net. The second net was towed at a depth between 175-225m for ~10 minutes. After the deep tow, a second messenger will be sent down the cable to close the second net and open a third net, which will collect a sample from the water as the net is hauled back to the boat. The Tucker trawl aims to collect a sample of krill that live near the edge of the continental shelf and the deep ocean.

3:46pm – After a full day of action, the boat is turning back toward shore and heading toward the Bodega Bay Marina.

5:42pm – The boat is pulling in to the marina at Bodega Bay. Once the crew secures the boat along a dock, our day will be “done.” We will eat aboard the boat this evening, and then likely hit the bunks pretty early so that we can rise bright and early again tomorrow morning, ready to do it all again along a different transect line!

Did You Know?

The word copepod means “oar-legged.” The name comes from the Greek word cope meaning oar or paddle, and pod meaning leg. Copepods are found in fresh and salt water all over the world and are an important part of aquatic food chains. They eat algae, bacteria, and other dead matter, and are food for fish, birds, and other animals. There are over 10,000 identified species of copepods on Earth, making them the most numerous animal on the planet.

July 22, 2019July 22, 2019

Erica Marlaine: Diving Down the pH Scale, July 13, 2019

NOAA Teacher at Sea

Erica Marlaine

Aboard NOAA Ship Oscar Dyson

June 22 – July 15, 2019

Mission: Pollock Acoustic-Trawl Survey

Geographic Area of Cruise: Gulf of Alaska

Date: July 13, 2019

Weather Data from the Bridge:

Latitude: 57º 09.61 N
Longitude: 152º 20.99W
Wind Speed: 15 knots
Wind Direction: 210 º
Air Temperature: 12º Celsius
Barometric Pressure: 1013 mb
Depth of water column 84 m
Surface Sea Temperature: 12º Celsius

Science and Technology Log

Are you wondering what it’s really like to live and work full-time on a NOAA research vessel? I asked Andrea Stoneman, the Senior Survey Technician on the NOAA Ship Oscar Dyson.

Like everyone onboard the Oscar Dyson, Andrea is always working hard, but always has a smile on her face. Originally from Duluth, Minnesota, she has been employed by NOAA as a “wage mariner” for a year. A wage mariner means she is an at-sea civilian employee of NOAA. She began college at the University of Minnesota as a business major, but an internship as a freshwater mussel researcher changed her life and made her realize her true love: BIOLOGY! She earned a degree in Environmental Science, and then attended graduate school at Delaware State University, where NOAA funded her research on ocean acidification and its impact on fish.

Are you wondering what ocean acidification means?

The amount of carbon in the ocean is rising due to an increase in the amount of carbon dioxide (CO2) in the air. Carbon dioxide acidifies the water, reducing its pH level. The letters pH stands for the ‘potential of Hydrogen.’ The pH scale was invented in 1909 by a biochemist names S.P. Sorenson. The scale uses numbers from 1 to 14, with 1 being the most acidic, 14 being the least acidic (or more alkaline) and 7 as the middle (neutral) point.

For the past 300 million years, the average pH of the ocean was approximately 8.2. It is now closer to 8.1, a drop of 0.1 pH units. Remember, the numbers go “in reverse” so a drop in pH means it is MORE acidic. You may be thinking, but it’s only a drop of 0.1. That doesn’t sound like a lot. However, a drop of 0.1 represents a 25-percent increase in acidity. That’s because the pH scale is a logarithmic scale, not a linear scale. To understand a linear scale, think of a ruler. The difference between inches on a ruler stays constant. A 5-inch fish is one inch bigger than a 4-inch fish, and 2 inches bigger than a 3-inch fish. In contrast, the pH scale is a logarithmic scale in which two adjacent values increase or decrease by a factor of 10. Therefore, a pH of 3 is ten times more acidic than a pH of 4, and 100 times more acidic than a pH of 5.

Studies indicate that many marine species may experience adverse effects on their health, growth, reproduction, and life span due to ocean acidification. That means fish could develop diseases, have fewer babies, or die younger.

You and I need calcium to build strong bones. We get calcium through milk, cheese, green leafy vegetables, and many other sources. Marine species also need calcium carbonate to build their bones or shells. Ocean acidification causes carbonate ions to be less abundant in the ocean, which makes it harder for marine species to build strong bones and shells. This is especially bad for oysters, clams, sea urchins, corals, and mussels, the very species that made Andrea fall in love with science!

After graduate school, Andrea worked as a fisheries observer on commercial fishing vessels. (I met quite a few people on-board the ship who are or were observers.) To a non-fisheries person, an “observer” SOUNDS like someone who stands around watching others, but it is actually very hard work! Observers document compliance (making sure that things are being done the correct way). They take samples of the catch and collect data regarding the size of the catch and the species caught. The data goes into the same service model that NOAA data does, which is vital for ensuring sustainable fishing for the future.

Through her work as an observer in Alaska, Andrea met people at NOAA, took a tour of a NOAA ship, and decided to apply for a job with NOAA. (Hmmm… When I interviewed Ensign Andonian for an earlier blog, she also mentioned visiting a NOAA ship as the thing that made her decide to choose a career with NOAA. That gives you an idea of just how amazing NOAA ships are!)

So what does a Senior Survey Technician do?

She runs and maintains all of the scientific sensors on the ship (including the meteorological and oceanographic sensors). She also runs the CTD, a device which measures the conductivity, temperature, depth, salinity, and other oceanographic parameters of the water.

In addition, she is involved in setting and retrieving the fishing nets and is an expert at processing the catch in the fish lab. Andrea ensures that the data collected onboard is sound and accurate, and “packages” the data so that it is presentable and accessible to NOAA thus becoming accessible to the public whom NOAA serves.

Asked if she recommends a NOAA life, Andrea says it’s great for college graduates who have an interest in science and a love of the ocean. Some perks (especially for new college graduates) include living rent-free onboard, having delicious meals cooked for you three times a day, and getting to see the world while being involved in interesting, and sometimes ground-breaking, scientific research. An added perk is that working for the federal government can “erase” some of your student loans!

Andrea enjoys being the Senior Survey Technician onboard the NOAA Ship Oscar Dyson, and has fallen in love with Alaska, which she now considers her home.

Click below to watch a 2-minute video by NOAA about ocean acidification:

Personal Log

While I cannot describe what it is like to live full-time on a NOAA ship, I can tell you what it’s like as a Teacher at Sea for 26 days. Like everyone onboard, I “work” a 12-hour shift. The science team works shifts starting at either 4 a.m. or 4 p.m. I was assigned the 4 p.m. to 4 a.m. shift. That means I wake up most days between 2:30 and 3:00 in the afternoon. On days that I am “good” I head down to the gym. On other days, I grab a light “breakfast” before heading to the chem lab to start my shift.

Often we start our shift processing fish by 4:30. First I suit up in steel-toed boots, a waterproof jacket and overalls, and elbow-high rubber gloves.

Erica ready for the fish lab — I am ready to work in the fish lab!

Then we process the haul, which means sorting approximately 1000 pounds of fish and jellyfish by species.

We weigh them, measure them, and dissect some to collect otoliths (ear bones) or ovaries. All of this can take 2-3 hours. Then we clean. The fish lab gets COVERED in fish slime, scales, and jellyfish goo.

There are high-powered waters sprayers hanging from the ceiling, and we blast every surface in the room with saltwater for at least 10 minutes after every haul. Imagine cleaning your kitchen with a fire engine hose! It’s definitely the most fun I have ever had cleaning!

cleaning the fish room — One of the many high power saltwater sprayers

At the end of the cruise, I will join Andrea the Survey Technician and the science team for 2-3 hours of meticulously scrubbing and spraying the fish lab so that it is clean and ready for the next group that comes aboard a few days after we leave.

Since the scientists onboard often want to do “pair trawls” (fishing in the same area using the “old” AWT net and the “newer” LFS net in order to align the catch data with the acoustics data), I am often back in the fish lab an hour later to process another haul, and again clean the fish lab.

After that, depending upon the time, I might have a snack, or do research and write blogs, or spend time in the chem lab with my co-workers, Matthew Phillips (the Fish Lab Lead) and volunteer biologist Nathan Battey, discussing the haul or what is coming up for the rest of the shift. At about 11 p.m., the sun sets, and sometimes it is spectacular, so I try to pop out onto the deck for a quick photo.

At midnight, we start getting ready to do the drop camera to determine which areas are trawlable. We usually do at least 4 camera drops, from approximately 1 p.m. to 4 p.m. This time of night often involves the science team consuming caffeine, ice cream, red vines, sour patch kids, or all of the above. At 4 a.m., the next shift starts, and my roommate, Jamie Giganti, comes into the chem lab. Jamie is a field coordinator for AIS. She works as an observer part of the time, but also provides support and training for new observers, and acts as a liaison between boat captains and observers.

Jamie’s arrival in the chem lab means it is my turn to go to “our” room. Although we are roommates, we are never actually in the room at the same time. The goal is that you stay out of the room for the 12 hours your roommate is off-shift, allowing them to sleep or relax. That means that every time I am on shift I need to make sure that I take everything I might need for the day.

The first few days onboard, I was in bed and asleep 15 minutes after my shift ended. Now that I am accustomed to the schedule, or perhaps due to the caffeine or sugar, I am often up until 5 or 5:30 a.m. That means I go to sleep just as the sun rises.

My stateroom has a bathroom and shower, a desk, a few shelves, lockers that act as a closet, and bunkbeds. (I was so happy when Jamie asked if she could have the top bunk!)

The large window has both magnificent views of Alaska and also blackout curtains that block the sun so that people on my shift can sleep.

The shower area in the bathroom has a slightly raised border, but since the boat moves while you are showering, so does the shower curtain.

Perhaps other people have figured out how to get the water to stay IN the shower. I am still working on that. On the upside, the bathroom floor gets cleaned every day! (I am told that one trick is to use zip ties to “lengthen” the shower curtain. (Next time?)

Processing a haul seems easy now, but it was overwhelming the first few days! As a non-scientist, I was unfamiliar with fish and jellyfish species, perplexed by the computer program used to enter data, and kept confusing which fish to measure, which fish to weigh, and which fish to measure and weigh. I am so grateful for the patience of everyone around me!

Amazingly, I never got seasick. I wore a scopolamine patch for the first part of the trip, and then one day decided to take it off and learned that I had in fact “gotten my sea legs.” Now I barely feel the boat moving during the day and enjoy the light rocking at night.

I am writing this during my last few days onboard. While we have occasionally been near land, during much of our time onboard, the view was the incredibly beautiful Gulf of Alaska. Yesterday, when I saw land in the distance, I was sad to learn that it was Kodiak. That means my time on the NOAA Ship Oscar Dyson is almost over.

March 15, 2015March 12, 2021

Sarah Raskin: Teacher at Sea Days 2 & 3, March 14-15, 2015

NOAA Teacher at Sea

Sarah Raskin

Aboard NOAA Ship Bell M. Shimada

March 13-18, 2015

Mission: Channel Islands Deep-Sea Coral Study

Geographic Area: Channel Islands, California

Date: March 14-15, 2015

Day 2: Saturday 3/14/15

Happy Pi Day everyone! The second day on the ship was productive and incredible. The weather was fantastic throughout the entire day, with hardly any wind and a sheet glass ocean. The stillness of the water made it easy to spot wildlife, and during the day we saw multiple pods of dolphins, sea lions, and a variety of sea birds such as cormorants and brown pelicans.

view from Shimada — A beautiful day aboard the *Bell M. Shimada* in the Channel Islands National Marine Sanctuary

dolphins — Dolphins swimming alongside the *Shimada*

The beautiful weather also made for smooth conditions to launch the ROV. The ROV took three dives today at different locations and depths each time. Peter and his team picked the locations around the Islands, staying true to spots they had visited in previous years. Part of their research involves looking at the same coral beds over the course of many years and recording what they observe and noting any changes that may have occurred. They are observing how the coral, specifically the species Lophelia pertusa, reacts to changes in pH levels and temperature. This information is important in finding indicators for how our ocean is being affected by warmer temperatures and ocean acidification.

Retrieving the Beagle ROV from its first dive of the day

So what exactly is ocean acidification?

As humans, we release carbon dioxide (CO₂) into the atmosphere and have been doing so in large quantities since the Industrial Revolution. Carbon dioxide is released during combustion, when we drive our cars, power our houses and factories, use electricity, burn things, cut down trees, etc.

The ocean acts as a sponge and absorbs about 30 percent of the carbon dioxide from the atmosphere. However, as levels of CO₂rise in the atmosphere, so do the levels of CO₂ in the ocean. This is not great news for our ocean or the organisms that make their home there. When CO₂ mixes with seawater, a chemical reaction occurs that causes the pH of the seawater to lower and become more acidic. This process is called ocean acidification.

Even slight changes in pH levels can have large affects on marine organisms, such as fish and plankton. Ocean acidification also reduces the amounts of calcium carbonate minerals that are needed by shell-building organisms to build their shells and skeletons. The damage to these shell-building organisms, including many types of plankton, oysters, coral, and sea urchins, can have a negative ripple effect throughout the entire ocean food web. An important part of the mission of this trip is to see how ocean acidification is affecting different types of deep-sea coral, such as Lophelia pertusa, that use calcium carbonate minerals to build their skeletons.

The scientists and the MARE team conducted three ROV dives throughout the day. The first dive brought up an outstanding Lophelia sample, and along with it a bizarre deep-sea creature called a basket star. Basket stars are a type of invertebrate that are related to brittle stars. Even though they feed mostly on zooplankton, they have long spindly arms that can reach to over a meter in length. It was astonishing to be able to see this alien looking creature alive and moving!

Chris and Peter — Chris Caldow and Peter Etnoyer and the basket star

Chris Caldow and Peter Etnoyer and the basket star

Day 3: Sunday 3/15/15

After long hours and a late night, the MARE team was able to get the manipulator arm on the ROV up and running, after having technical difficulties with it during the first half of our trip. This was perfect timing for the first ROV dive of the day in the waters between Santa Cruz and Anacapa Islands. The goal of this dive was to find scientist Branwen Williams a type coral known as Acanthogorgia. This coral is incredibly beautiful; tall, fan-like and golden in color.

coral and shark egg case — An Acanthogorgia with a cat shark egg case

Bombs Away: Branwen hoped to collect samples of this coral to take back to her lab for testing. She and her team of students and scientists will use these samples to ascertain how old the corals are, how fast they grow and what are they eating. Branwen explained to me that coral, similar to trees, have growth rings that can be used to determine age as well as other factors. She mentioned that when looking at age, she looks for the pattern of the “bomb curve” within the coral rings and that provides scientists with a relative date of how old the corals are. The “bomb curve” is a concentration of radiocarbon (¹⁴C) that is found in corals in every ocean in the world. The concentration of radiocarbon is a direct product of the bomb testing that took place starting in the 1950’s and produced large amounts of this radiocarbon into the atmosphere. The ocean absorbed that particular type of carbon, and in turn it was absorbed by the corals, who are suspension feeders. Suspension feeding means that corals eat by stretching their tentacles out to catch tiny particles that are floating by. So scientists identify the start and peak of the bomb testing in the radiocarbon stored in the coral skeleton to determine growth rates and then the ages of the corals. This was very shocking to me that corals in every ocean have this radiocarbon in their bodies, and clear evidence of how much human actions impact the entire globe.

team looks at samples — The team looks to see what samples have been collected

The Chief Boatswain prepares to operate the winch that will help lift the ROV out of the water

crewmembers — MARE and NOAA crew work together to make sure the ROV makes it back on board safe and sound

Diving Deep: The ROV was dispatched into the water and soon sunk to around 200 meters. As it cruised along the ocean floor the team watched as a variety of rockfish scuttled by. The ROV has two sets of lasers that shoot out in front of it, each spaced 10 centimeters apart. This gives the scientists an idea of the size of objects or organisms that pass in front of the camera.

The team located the Acanthogorgia habitat and got to work collecting samples using the manipulator arm. The manipulator arm reminds me of the claw game found in most arcades. Andy remotely operated the arm, while Dirk worked simultaneously to control the ROV. Together they were able to collect three exceptional samples, including two Acanthogorgia corals attached to hefty rocks. Each time the manipulator arm reached towards a coral, the whole crew of the Shimada held in their breath in suspense. Would the arm be able to grasp its target? The live footage from the ROV is now being streamed throughout the entire ship; in the lounges and staterooms too, so Andy and Dirk had a quite an audience cheering them on!

ROV watch party — Andy and Dirk work the controllers while Peter, Branwen and Leslie watch closely nearby

The samples made it back to the ship safely. Branwen prepared the coral to take back to the Keck Science Department of the Claremont College where she and her students will conduct their research about this little known species of coral.

Thinking about the effort it takes to research deep-sea coral, involving ROVs and commissioning ships to reach their remote locations, it’s no wonder we know little about them and so much more about their shallow water relatives.

Branwen and coral — Branwen and one of the Acanthogorgia samples

Dirk and Andy coral — Dirk and Andy after a job well done

Chief Survey Tech and ROV — Our Chief Survey Tech waits patiently to assist with the next ROV dive.

September 15, 2014August 21, 2021

Janelle Harrier-Wilson: T-8 Days and Counting – It’s Almost Time to Set Sail! September 14, 2014

NOAA Teacher at Sea
Janelle Harrier-Wilson
(Soon to Be) Onboard NOAA Ship Henry B. Bigelow
September 23 – October 3, 2014

Mission: Autumn Bottom Trawl Survey Leg II
Geographical area of cruise: Atlantic Ocean from the Mid-Atlantic Coast to S New England
Date: September 15, 2014

Personal Log

Janelle Harrier-Wilson with husband, Neil, and golden retriever, Devon, as a puppy. — With my husband, Neil Wilson, and my dog, Devon. He was a puppy at the time and graduating from training classes.

Hello and welcome! I am so excited to be a part of the NOAA Teacher at Sea experience. I currently teach chemistry, engineering, and technology at Lanier High School in Sugar Hill, GA (outside of Atlanta). I am part of an awesome project based learning (PBL) program called CDAT (Center for Design and Technology), which focuses on science, technology, engineering, and math (STEM). Lanier High School opened in 2010, so this is our fifth year as a school; however, this is my first year teaching here. Before transferring to Lanier High School, I taught sixth grade Earth science at Lanier Middle School for eight years. Now, I have the awesome privilege of teaching many of my students a second time. It’s really fun to see how much they have grown up and matured since they were sixth graders.

I am looking forward to sharing what I learn with my students as I think my engineering students will gain insight into shipboard careers they may have never considered, especially as it relates to engineering. I think my technology students will get a chance to see how scientists collect and organize data using technology tools.

Although I teach chemistry and this research cruise is focusing on fisheries, I know my students will gain a new understanding of our oceans. Sampling the health, age, and quantity of different fish species with the NOAA scientists help us to measure the health of the oceans. Some of the big issues with the health of our oceans concern overfishing, human pollution, and ocean acidification. Ocean acidification refers to how the oceans take some of the extra carbon dioxide from the air and dissolve it into the water. This lowers the pH of the water making it more acidic, which can affect the health of the ocean’s inhabitants.

I applied to be a NOAA Teacher at Sea so I could learn more about our oceans in order to share this knowledge with my students. I have always been a hugely passionate about space and space exploration. I’ve had so many cool space opportunities like seeing shuttles and rocket launches, going to Space Camp, floating in microgravity, and most recently, helping our students talk to Reid Wiseman on the International Space Station via amateur radio.

Space is awesome and amazing, but we have an equally amazing frontier right here on own planet, our oceans. I want to be able to share with my students about the oceans with as much confidence and enthusiasm as I do about space, so I am extremely happy to be a Teacher at Sea so I can begin to glimpse all the science our oceans entail. I was also inspired to apply after hearing the stories from two Teacher at Sea Alumni Jennifer Goldner and Kaci Heins, who I met at Advanced Space Camp and now call dear friends.

Experimenting in microgravity with Kaci Heins photo from NASA

Janelle Harr-er-Wilson on the water in Florida as a child — Me as a child in Florida

I grew up on the west coast of Florida near the Gulf of Mexico. Just two miles from my house was a tiny commercial fishing village, Cortez. My childhood best friend lived in Cortez, so I spent many days running up and down the docks and sampling the fresh caught seafood. (Fresh smoked mullet was my absolute favorite!) This gave me a unique look at the importance of fishing to a community. I even had a chance to go out on a small boat with a commercial fisherman and a few of my friends one night and catch fish via nets. So even though space has always been my passion, I feel a connection to the ocean as well.

My cruise is on the Henry B. Bigelow, a NOAA ship outfitted for fisheries research. You can take a virtual tour of the Henry B. Bigelow including the science labs, and track the ship here.

I am part of Leg II of the Autumn Bottom Trawl. We will be taking samples of fish and other species of marine animals from the Mid-Atlantic to Southern New England to measure the abundance, health, and age of certain fish species. As part of the science team, I will work a twelve hour shift everyday – either from noon to midnight (day shift) or from midnight to noon (nigh shift). I will find out my assigned shift when I arrive to the ship.

Right now I am working on getting everything I need ready and thinking about packing. Since space on the ship is very valuable, I am trying to pack as lightly as possible. Some of the things I plan to bring with me are earplugs (I hear the engines are loud so it’s good to have these while sleeping), anti-nausea aids so I don’t get seasick, and cameras to document my trip. A couple of weeks ago, I received this cool package of items from the Teacher at Sea program. I’ll definitely be bringing the water bottle, shirt, and hat with me. The good thing is there are laundry facilities on board, so I don’t have to pack too many outfits. I also plan to bring a companion along with me. At my school, we are the Lanier Longhorns, so I will be bringing one of the plush longhorns along with me for this adventure. My question for you is which one? Toro or Tyson? You get to decide!

Who should join me at sea: Toro or Tyson?

At Lanier, our motto is Learn.Lead.Succeed. I cannot wait to learn new things on this trip and share them all with you! What things to you hope I will learn and share with you? Please leave your ideas in the comments. Until next time!