lionfish – NOAA Teacher at Sea Blog

August 26, 2022August 30, 2022

George Hademenos: A Day in the Life…of a Marine Science Researcher, August 25, 2022

NOAA Teacher at Sea

George Hademenos

Aboard R/V Tommy Munro

July 19 – 27, 2022

Mission: Gulf of Mexico Summer Groundfish Survey

Geographic Area of Cruise: Eastern Gulf of Mexico

Date: August 25, 2022

In this post, I would like to walk you through my interactions and observations with the science research being conducted aboard the R/V Tommy Munro, in particular, the steps that were taken during a trawling process. The entire process involved three stages: Preparing for Sampling, Conducting the Sampling, and Analyzing the Sampling with each stage consisting of six distinct steps.

View the following steps in an interactive tour here: Trawl Sampling Process (Genially)

I. Preparing for Sampling

Step 1: The ship travels to designated coordinates for sampling sites as determined for the particular leg of the Survey by SEAMAP (Southeast Area Monitoring and Assessment Program).

screenshot of a computer screen showing the path that R/V Tommy Munro traveled among sampling sites. The ship's path is a bold blue line connecting sample sites marked in yellow. It's superimposed on an electronic nautical chart. This survey occurred southeast of Florida's Apalachicola Bay and St. George Island. — **Ship Transport to Sampling Site**

Step 2: Once the ship reaches the site, a Secchi disk is attached to a cable and lowered into the water off the side of the ship to determine visibility. When the disk can no longer be seen, the depth is recorded and the disk is raised and secured on ship.

a scientist wearing a life vest stands on a small grated platform that has folded down off the fantail of R/V Tommy Munro. With his left land, he grasps a cable hanging from an A-Frame that extends out of the photo. The cable is attached to a white disk, about the size of an old record, with a weight underneath. — **Deployment of Secchi Disk**

Step 3: A CTD (Conductivity, Temperature, and Depth) unit is then prepared for deployment. It is a rectangular chamber with sensors designed to measure physical properties of the water below including dissolved oxygen, conductivity, transmissivity, and depth.

a conductivity, temperature, and depth probe, mounted inside a rectangular metal cage about 1 foot square and about 3 feet high, sits on deck. a crew member wearing white shrimp boots hooks a cable onto the top of the CTD frame. Another person, mostly out of frame, touches the CTD frame with their right hand, covered in a blue latex glove. — **Preparation of CTD Unit**

Step 4: The CTD unit is powered on and first is submerged just below the surface of the water and left there for three minutes for sensors to calibrate. It is then lowered to a specified depth which is 2 meters above the floor of the body of water to protect the sensors from damage.

the CTD unit, attached to a cable, sinks into dark blue water. — **Deployment of CTD Unit**

Step 5: Once the CTD unit has reached the designated depth, it remains there only for seconds until it is raised up and secured on board the ship.

a science team member, wearing a blue hat, a blue life vest, and blue latext gloves, stands on the deployment platform out the back of R/V Tommy Munro. He grasps the top of the CTD frame as a cable lifts it back out of the water. — **Recovery of CTD Unit**

Step 6: The CTD unit is then turned off and the unit is connected through a cable to a computer in the dry lab for data upload. Once the data upload is completed, the CTD unit is flushed with deionized water using a syringe and plastic tubing and then secured on the side of the ship.

the CTD unit sits on deck, now connected to a computer via a cable to upload the data it collected. — **Data Upload from CTD Unit**

II. Conducting the Sampling

Step 1: The trawling process now begins with the trawl nets thrown off the back of the ship. The nets are connected to two planks, each weighing about 350 lbs, which not only submerges the nets but also provide an angled resistance which keeps the nets open in the form of a cone – optimal for sampling while the ship is in motion.

a view of the fantail of R/V Tommy Munro, from an upper deck. we are looking through the rigging of the trawl frames. two large planks rest on the lower deck, connected to ropes and lines. the trawl net, connected to the planks, extends out the back of the fantail. It is just visible below the surface, a turquoise-colored cone submerged in a blue sea. — **Preparation of the Trawling Process Part 1**

another view of the fantail of R/V Tommy Munro from an upper deck, through extensive rigging and frames. the trawl net is further extended; now the large planks are lowering off the back deck as well, suspended by lines connected to a pulley in an A-frame. it is a clear day and the water is very smooth. — **Preparation of the Trawling Proces**s Part 2

Step 2: Once the trawl nets have been released into the water from the ship, the ship starts up and continues on its path for 30 minutes as the nets are trapping marine life it encounters.

a view of the fantail of R/V Tommy Munro from an upper deck. the trawl net is fully deployed and no longer visible. a crew member sweeps the deck. — **Onset of the Trawling Process**

Step 3: After 30 minutes has transpired, a siren sounds and the ship comes to a stop. The two weighted planks are pulled upon the ship followed by the trawl nets.

a view of the A-frame at the fantail R/V Tommy Munro as the trawl net rises from the ocean. The two spreader panels are suspended from separate lines running through the central pulley. behind those, the top of the trawl net is visible above the water. a crew member guides the spreader doors with his left hand, holding the lines with his right hand. — **Conclusion of the Trawling Process** Part 1

the spreader doors are now resting on the fantail deck again. two crewmembers, wearing life jackets, pull the trawl net back on board. — **Conclusion of the Trawling Process** Part 2

Step 4: The trawl nets are raised and hoisted above buckets for all specimens to be collected. Then begins the process of separation. In the first separation, the marine life is separated from seaweed, kelp and other debris. The buckets with marine life and debris are then weighed and recorded.

a crewmember (only partially visible) empties the contents of the trawl net into a blue plastic basket. it looks like it's mostly sargassum. — **Content Collection from the Trawl** Part 1

four plastic baskets on deck hold the sorted contents of the trawl. one has larger fish; another contains only a single fish; a third is a jumble of seaweed and sargassum, and may represent the remainder to sort; the contents of the fourth are not visible. a crewmember wearing a life vest and gloves leans over the baskets. another crewmember, only partially visible, looks on. — **Content Collection from the Trawl** Part 2

Step 5: The bucket(s) with marine life are emptied upon a large table on the ship’s stern for separation according to species.

a pile of fish on a large metal sorting table. we can see snappers, a trigger fish, and many lionfish. a stack of white sorting baskets rests adjacent to the pile. — **Separation Based on Species** Part 1

a gloved hand reaches toward the pile of fish on the metal sorting table. (this photo was taken from the same vantage point as the previous one.) — **Separation Based on Species** Part 2

Step 6: Each species of marine life is placed in their own tray for identification, examination, and measurements inside the wet lab.

two gloved crewmembers sort fish into smaller white baskets on a large metal sorting table. the table is on the back deck of the ship, and we can see smooth ocean conditions in the background. the crewmember in the foreground considers a small fish he has picked up from the remaining unsorted pile. the other crewmember looks on. — **Species Sorted in Trays** Part 1

a close-up view of the sorting basket containing only lionfish. — **Species Sorted in Trays** Part 2

III. Analyzing the Sampling

Step 1: After all species were grouped in their trays, all trays were taken into the wet lab for analysis. Each species was positively identified, counted, and recorded.

a direct view of three fish of different species, lined up on the metal sorting table. the third is a spotfin butterflyfish. — **Tray Transport to Wet Lab**

Step 2: Once each species was identified and counted, the total number of species was weighed while in the tray (accounting for the mass of the tray) and recorded on a spreadsheet to a connected computer display system.

a view of a scale. — **Total Weight Measurements**

Step 3: For each species, the length of each specimen was recorded using a magnetic wand with a sensor that facilitated the electronic recording of the value into a spreadsheet.

two hands, wearing latex gloves, measure a small lionfish on the electronic measuring board. the scientist holds the fish against the board with his left hand and with his right hand marks the length with the magnetic stylus. — **Individual Length Measurements**

Step 4: Weights of the collected species were recorded for the first sample and every fifth one that followed.

the gloved arm places the small lionfish on the scale behind the fish measuring board. — **Individual Weight Measurements**

Step 5: If time permitted between samplings, the sex of selected specimens for a species was determined and recorded.

gloved hands cut into a small lionfish to remove the fish's gonads. — **Individual Species Sex Identification**

Step 6:Once the entire sampling was analyzed, selected samples of specimens were placed in a baggie and stored in a freezer for further analysis with the remaining specimens returned to a larger bucket and thrown overboard into the waters. The separation table was cleaned with a hose and buckets were piled in preparation for the next sampling.

view out the fantail of R/V Tommy Munro from the lower deck. the trawl net and spreader doors lay on the deck, not currently in use. the sun shines on calm seas. — **Finalize Process and Prepare for Next**

In this installment of my exercise of the Ocean Literacy Framework, I would like to ask you

to respond to three questions about the fifth essential principle (The ocean supports a great diversity of life and ecosystems.), presented in a Padlet accessed by the following link:

https://tinyurl.com/427xp9p3

Remember, there are no right or wrong answers – the questions serve not as an opportunity to answer yes or no, or to get answers right or wrong; rather, these questions serve as an opportunity not only to assess what you know or think about the scope of the principle but also to learn, explore, and investigate the demonstrated principle. If you have any questions or would like to discuss further, please indicate so in the blog and I would be glad to answer your questions and initiate a discussion.

August 24, 2022August 26, 2022

George Hademenos: (Working) 9 to 5…and Then Some When at Sea, August 24, 2022

NOAA Teacher at Sea

George Hademenos

Aboard R/V Tommy Munro

July 19 – 27, 2022

Mission: Gulf of Mexico Summer Groundfish Survey

Geographic Area of Cruise: Eastern Gulf of Mexico

Date: August 24, 2022

In the prior blog post, I focused my attention on the ship that I would be sailing on during Leg 1 of the Summer SEAMAP Groundfish Survey and then took you on a virtual tour of the various compartments and areas of the R/V Tommy Munro. The ship is an enclosed, confined space and thus I found myself spending much of my time in most of the compartments and areas of the ship during my time on the cruise. In this post, I would like to describe what life was like on the ship as a member of the science team.

Work schedule

My primary role as a Teacher at Sea was to participate in the research process for this cruise – Summer Groundfish Survey. The detailed step-by-step description of the preparation, collecting, measuring, and analysis of sampling specimens of marine life will be covered in the following blog post. However, regarding the work conducted on the ship, research is ongoing continuously on a 24-hour schedule. The science research team was grouped into two teams with each team working a 12-hour shift. The two teams worked either the AM shift (12:00 am Midnight – 12:00 pm Noon) or the PM shift (12:00 pm Noon – 12:00 am Midnight), seven days a week. I was assigned the PM shift, which took a little getting used to but after the first full shift, the schedule became a routine schedule.

Small living quarters

One of things I should have packed prior to the cruise was a football helmet. Why you might ask? In the prior post as I took you on a tour of the R/V Tommy Munro, I showed pictures of my living quarters on the ship and my bed which provided limited space. If you will recall, my bed was the bottom bunk to the left in the photo below.

A collage of two images. On the left, a view of a closed door (simple, wooden, with a knob, could be in a house.) Several pieces of laminated paper are taped to the door. One reads: State Quarters 2. The next are the two pages of the Emergency Station Bill (not close enough to read). On the right, a photo looking inside the stateroom, where we can see four bunks. — My living quarters aboard the R/V *Tommy Munro*.

In fact, as I retired to my bed on the first night, I bumped my head. I then got up to go to the bathroom and I bumped my head. Returning to the bed and positioning myself under the covers, I bumped my head yet again. After bumping my head an additional 1,374 times (not really but it seemed like an accurate enough number), I wish I had thought to pack a football helmet but I was not the only one having trouble moving in my bed without bumping my head. My bunkmates experienced the same thing – apparently a normal occurrence in life at sea.

Meals

One thing to note that while aboard the ship, I never… and I mean never… found myself hungry. There were all sorts of food to accommodate all tastes for all workers at all hours of the day and night. The cook on board the R/V Tommy Munro, John Z., was an amazing cook and continuously worked his magic in the kitchen to prepare three square meals for the crew and research staff. The three meals were breakfast at 5:30 am, lunch at 11:30 am, and dinner at 5:30 pm. One of my many pleasant memories after working one of my shifts and getting to bed by 1:30 am was being awoken by the smell of bacon wafting through the ship. Although I was going on 4 hours of sleep and was dead tired, the bacon was calling… no, scratch that… screaming my name and I was dressed and had a seat at the dining table within 15 minutes. Because of the long shifts often involving hard, strenuous work, many of the crew would sleep through a meal or two. However, leftovers of the prior meal were always available to those sleeping in to be heated up and enjoyed later. Lunch was the one meal that could be enjoyed by the PM crew before starting their shift and be the AM crew as they completed their shift on their way to bed. Some examples of meals that I enjoyed during my time on the R/V Tommy Munro is shown in the collage below.

DO NOT Touch that Fish but… Bon Appétit!

As an educator interested in any and all things science, I would always look forward to the end of the sampling process and the emptying of the nets to survey our catch – a grab bag of a variety of different types of marine life and species. I had seen images of several types of marine life contained within the nets and recognized even fewer numbers by their name, but again this was an opportunity to learn and every sampling increased my library of marine science knowledge. During one such sampling (as shown in the photo below), I noted a multitude of one species of fish that were unique in their presence and I quickly understood them to be a species of lionfish.

a pile of fish on deck next to a stack of empty sorting bins. there are at least four, maybe as many as seven, lionfish visible in the pile. They are easily identifiable by their pink, orange, and white stripes and marbling and their frilly fins. — The collection of fish from a sampling.

I was somewhat familiar with lionfish and knew them to be an invasive species, detrimental to marine ecosystems. For those interested in learning more about lionfish, please review the two graphics below:

a poster about invasive and venomous lionfish. "With their distinctive venomous spines and aggressive nature, this invasive species has thrived in U.S. coastal waters because they have no natural predators--until now. Whole Foods stores in Florida are selling the 'white, buttery meat' of the fish, hoping to take a bite out of the non-native species hurting Florida's offshore reefs." — An infographic describing the features and habitat of the lionfish.
Credit: Hiram Henriquez / H2H Graphics & Design Inc.

Office of National Marine Sanctuaries, National Oceanic and Atmospheric Administration. Invasive Lionfish By the Numbers. Biology: 50,000 eggs every 3 days. 1 Year to Maturity. 30 Year Lifespan. 18 venomous spines. Distribution: 17x density in Atlantic vs. native Pacific range. Reach depths of 1,000 feet. 1985: year first found off Miami, FL. 4 U.S. national marine sanctuaries invaded: 1) Monitor, 2) Gray's Reef, 3) Florida Keys, 4) Flower Garden Banks. Map of invaded area (Gulf of Mexico, Caribbean, eastern U.S. coast) and area projected for invasion (Brazilian coast.) Control: 164 restaurants serving lionfish. 51,420 lbs of commercial lionfish caught in U.S. 28,770 lionfish removed during REEF sanctioned lionfish derbies. Impacts: Invasive species threaten coral reefs. Before invasion: (illustration of diverse fish assemblage on reef) after invasion: (mostly lionfish.) Over 100 prey fish species. 1,000 lionfish can consume 5 million prey fish in 1 year. 0 known predators. — An infographic depicting invasive lionfish by the numbers. Download full version here: https://sanctuaries.noaa.gov/lionfish/invasive-lionfish-by-the-numbers.pdf

and access the Invasive Lionfish Web portal at:

http://lionfish.gcfi.org/education-outreach#front_page_accordion-block-5

Lionfish adversely impact coral reefs by feeding on herbivores which in turn feed on and keep a check of algae growth as well as pose a danger to any organism that comes in direct contact with them. They carry venomous spines which contain a deadly poison that can initiate a severe and painful allergic reaction in humans and can be fatal when in contact with other marine species. This is exactly why I was warned several times to avoid touching the lionfish… orders I followed to a T. When the sampling was brought into the wet lab for analysis, I asked Andre D. and my team members Kyle A. and Jacob G. questions about lionfish to find out more information about this interesting species of fish. We were discussing its detrimental impact to marine ecosystems, and the efforts currently underway to curtail the population of lionfish, when the ship’s cook, John Z., mentioned that they are very delicious and often served in seafood dishes like fish tacos. He went on to explain that one strategy to control the population of lionfish was to see if they could be eaten and if people would find it palatable. It turned out that this was the case for lionfish. I did not know that lionfish could be eaten and expressed surprise. He waited until the analysis of the sampling was over and then took two lionfish to the kitchen, cooked them, and brought the prepared fish to us in the wet lab to taste. I did and John Z. was right – it was very delicious!

a collage of two photos titled, "Lionfish Just Caught... and Just Cooked." on the left, a basket of lionfish sorted out from the sample. on the right, a paper plate with cooked lionfish meat. — Lionfish captured…and consumed!

Seasickness

During the Orientation webinar for all Teacher at Sea educators who would be sailing this season, the topic of seasickness came up and it was strongly suggested to have Dramamine on hand to relieve the unpleasant symptoms of motion sickness. Nawww, I’ll be OK. It would be one less thing to worry about during packing. My wife thought differently and urged me to take some with me…just to have on hand. So, I did pack some Dramamine just in case I need it. Well, on the first night of my cruise, it turned out that I needed it. As much as I thought I would be OK once the ship set sail, my stomach thought otherwise and experienced a mild case of nausea. I did take some Dramamine and allowed me to get some restful sleep and everything was fine. Dramamine did come in handy a couple of other times, particularly when the waters became more choppier than usual, but for the most part, I feel that I adjusted to life at sea quite well. Nevertheless, I was glad I had Dramamine with me.

No Wi-Fi

As a science teacher engaged in a once-in-a-lifetime opportunity like Teacher at Sea, I am particularly excited about sharing my experiences…as they happen in real time. However, updating blog posts, uploading photos to Facebook, or engaging followers through social media can only happen if Wi-Fi is available. The NOAA fleet of research vessels are equipped with Wi-Fi which as I was reminded on frequent occasions can be weak and intermittent. However, the R/V Tommy Munro was not part of NOAA and had no Wi-Fi. It was not possible for me to communicate my observations, my photos, and my narratives as a Teacher at Sea while it was happening. It just meant I would have to wait until the end of the cruise to begin sharing my experience.

On Deck scenic views

Although many might think that the lack of Wi-Fi would be a major inconvenience, I actually found it to be refreshing, offering me opportunities to simply relax. After a long shift and getting some rest, I would often go up to the top deck and just look gaze all around. At what you are probably wondering? Enjoy a sample of the breathtaking views I enjoyed from my perch atop the deck of the R/V Tommy Munro.

a collage of five photos titled, "Breathtaking Views of the Scenery Aboard the R/V Tommy Munro." Clockwise from top left: 1) the sun shines on water out the fantail of the R/V Tommy Munro. 2) sunsets in an orange sky over the water. 3) the wake of R/V Tommy Munro breaks otherwise smooth waters at daytime. 4) another view over the water at sunset. 5) somewhat choppier conditions and rain visible on the horizon. — Scenic views from aboard the R/V *Tommy Munro*.

In this installment of my exercise of the Ocean Literacy Framework, I would like to ask you to respond to three questions about the fourth essential principle:

The ocean made Earth habitable.

presented in a Padlet accessed by the following link:

https://tinyurl.com/32kdpx3e

July 29, 2019July 30, 2019

David Madden: Otolithia and The Tragedy of the Commons, July 27, 2019

NOAA Teacher at Sea

David Madden

Aboard NOAA Ship Pisces

July 15-29, 2019

Mission: South East Fishery-Independent Survey (SEFIS)

Geographic Area of Cruise: Atlantic Ocean, SE US continental shelf ranging from Cape Hatteras, NC (35°30’ N, 75°19’W) to St. Lucie Inlet, FL (27°00’N, 75°59’W)

On board off the coast of North Carolina – about 45 miles east of Wilmington, NC (34°18’ N, 77°4’ W)

Date: July 27, 2019

Weather Data from the Bridge:

Latitude: 34°18’ N
Longitude: 77°4’ W
Wave Height: 3-4 feet
Wind Speed: 6.68 knots
Wind Direction: 42°
Visibility: 10 nm
Air Temperature: 28.0°C
Barometric Pressure: 1022.4 mb
Sky: Partly cloudy

Science and Technology Log

Today, with the help of friends Zeb and Todd, I’d like to take a deep dive into the mission of this cruise. Starting with the fish work up process aboard Pisces, first explained in blog #3. Below is a picture flowchart I drew up to help visualize what’s going on.

NOAA Fish Protocol (color) — NOAA SEFIS Fish Survey Protocol

This sequential process is rather straight forward following steps 1-8, rinse (the gear) and repeat. It’s the before and after; what comes before step 1 and after step 8, that’s important; How and where is the data used. If you follow along into steps 9, 10, 11… you start with the laboratory analysis of the biological samples – otoliths and gonads – used to age the fish, and determine reproductive activity and spawning seasons, respectively. This information is vital to proper management of fisheries. Here’s why.

This cruise, and SEFIS in general, originally came into existence because of red snapper. Scientists determined around 2009 that the red snapper population in the SE Atlantic was at historically low levels. Strict regulations were put in place to help the species rebound. This on its own was a good measure, but only one step. In order to assess the effect of the regulations, scientists would have to monitor the abundance of red snapper in the region. However, charting changes in abundance would not be enough with this species (or with many others) due to the nature of its life cycle and reproduction. See, all populations have a natural age structure balance. This includes species specific traits – like its survivorship curve (how likely it is for an individual to die at different points in their life – for red snapper and many other reef-associated species it’s incredibly high at their larval and juvenile stages). It also includes pertinent developmental characteristics such as when the species is reproductively mature. Like many similar fish, older, mature red snapper have greatly increased reproductive potential, also known as fecundity. So while the population has been bouncing back in terms of numbers, the number of older, mature, more fecund fish is still considerably lower than historical levels; thus the population is still recovering. *this information is gathered from the data collected by scientist here on our SEFIS mission, and others like them.

The next step is to share this data with other scientists who will then, in conjunction with other information on the species, analyze the data and bring the results and conclusions of their analyses to policy makers (FYI, the government is moving towards making governmentally gathered scientific data available to the public). Discussion ensues, and climbs the political decision-making-ladder until allowable catch regulations are determined. Florida fishers, check here for your current snapper regulations or maybe this Fish Rules app will help. Fish safe, my friends!

Morning Crew — Morning crew: Mike, Dave, Brad, Me, Todd, Oscar the Octopus, Mike, Zeb

Macabre medieval cutlery? Or otolith extraction gear?

Ultimately this is a tricky and tangled issue of sustainability. Commercial fishermen are understandably upset, as this can threaten their livelihood. Although real, this concern is inherently short sighted, as their long term earnings depend on healthy and robust populations, and ecosystems. The difficult part is to gather the necessary scientific data (very challenging, especially for marine organisms) and marry that to the many financial, social, and political concerns. Comment below with thoughts and suggestions. And while you’re at it, here’s a lovely and quick (fish-related) tutorial overview of this situation in general – the tragedy of the commons – and the challenges of managing our resources.

A quick note about otoliths. Within the fish processing protocol (above) – the most satisfying part is otolith extraction. On board competitions abound: people vie for first chair (the spot in the lab that’s the coolest and best lit) and for the sharpest knives and scissors. Much like a wild west showdown, most important is fastest extraction times. Dave H opts for the classic chisel-through-the-gills technique, while the rest of us opt for the saw-through-the-skull-with-a-knife-and-crack-the-head-open-just-behind-the-eyes technique. While Brad looks to perform the “double-extraction” – both otoliths removed in the tweezers at the same time, I look to perform the please-don’t-slice-my-hand-open extraction. The quest for otoliths is usually straight forward. But sometimes an ill-sliced cut can leave you digging for the tiny ear bones forever.

This leaves us with: Why otoliths? These tiny little ear bones help function in the fish’s vestibular system. That’s a fancy way of saying the balance and orientation system of the fish. They help vertebrates detect movement and acceleration, and they help with hearing. These little bones help you determine your head and body orientation – turn your head sideways, it’s your otoliths who will send the message. All vertebrates, including you, gentle reader, have them. This makes me wonder if folks with exceptional balance and proprioception and court awareness have bigger otoliths? Fish requiring more balance, those that sit and wait to hunt vs. those that swim predominantly in straight lines, have bigger otoliths.

Otoliths are made of layered calcium carbonate (side question – does ocean acidification impact otolith formation? Like it does with other calcium carbonate structures in the ocean?) The fish secretes new layers as it ages: thicker layers during good times, thinner layers during lean times – correlated with summer and winter seasonality – just like with tree rings. Once you dig out the otoliths, they can be analyzed by on-shore scientists who slice ‘em in half and take a really thin slice, deli-meat-style. Voila! You can then count up the rings to tell how old the fish is.

Fish Otolith — From Andrews et al 2019, published in the Journal of Marine and Freshwater Research: Illustration of a red snapper (top right), a photo of a red snapper otolith (top left), and an image of a cross-section of that otolith (bottom) http://www.publish.csiro.au/MF/fulltext/MF18265

cod otolith — From Hardie and Hutchings 2011, published in the journal Arctic: A cross-section of the sagittal otolith of an Atlantic cod.

Retrieved from https://www.researchgate.net/publication/255711740_The_Ecology_of_Atlantic_Cod_Gadus_morhua_in_Canadian_Arctic_Lakes

Black sea bass otoliths with fingers for size comparison. Photos from Dave Hoke

Fish Count July 25th — Yesterday’s Fish Count.

Personal Log:

I’ve been continuing my work aboard the Pisces. Lately the focus has been on conversations with scientists and ship personnel. The source of most of today’s blog came primarily from conversations with Zeb and Todd. They were both super helpful and patient in communicating the goals and mission of this cruise and SEFIS. I’m also trying to contribute some things that might be useful to the NOAA scientists after the cruise is completed, and things that will be helpful to my students now and during the school year – like the drawings and diagrams, along with some upcoming videos (topics include: CTD color and pressure, Underwater footage featuring a tiger shark and hammerhead shark, Waves, All Hands on Deck, and a general cruise video).

The food and mood of the cruise continues to be good. * note: my salad eating has taken a hit with the expiration of spinach and leafy greens – it’s amazing they lasted as long as they did – the stewards, Rey and Dana, are amazing!

General Updates:

The other night I had my first bit of troubled sleeping. The seas were roaring! Actually, just about 6 feet. But it was enough to rock the boat and keep me from falling asleep. It was almost a hypnic jerk every time the ship rolled from one side to the other. Special sensations for when my head dipped below my feet.
Two more book recommendations: a. Newberry Book Award Winner: Call it Courage, by Armstrong Sperry. I loved this book as a little boy. I did a book report on it in maybe the 2^nd or 3^rd grade. I spent more time drawing the cover of the report than I did writing it. B. A few years ago I read The Wave, by Susan Casey. Great book about the science of waves and also the insane culture of big wave surfers.
I haven’t seen all that much lately in terms of cool biodiversity. The traps did catch some cute swimming crabs, a lionfish, and a pufferfish. * more below.
Zeb won the Golden Sombrero Award the other day. This is a momentous achievement awarded to a chief scientist after six consecutive empty fish traps!
Lauren crafted us an extra special tie-dye octopus named Oscar. He’s wearing the Golden Sombrero in the photo above.
Only 2.5 days till I’m back home. Can’t wait to see my family.

Neato Facts =

Back to general update #3 and today’s neato fact. Both lionfish and pufferfish are toxic. But are they poisonous? Or venomous? Wait. What’s the difference? Both poisons and venoms are characterized as toxins, and often they are used interchangeably. The distinction lies in the means of entry into your body. Venoms get into you via something sharp – you’re either bitten with fangs or stung with stingers or spines. Examples include our friend the lionfish, snakes, and bees. Poisons, conversely, get into you when you eat it. Examples include pufferfish, poison dart frogs,

Here’s a simple way to remember: Injection = Venom, Ingestion = Poison. Click these links for interesting lists of poisonous animals, poisonous plants, and venomous animals.

Lionfish and Pufferfish — Lionfish (Venomous) and Pufferfish (Poisonous). Injection = Venom, Ingestion = Poison http://www.peakpx.com/487337/lion-fish-and-blue-puffer-fish

Please let me know if you have any questions or comments.

August 6, 2018October 12, 2018

Jeff Peterson: The Work in the Eastern Gulf, July 19, 2018

NOAA Teacher at Sea

Jeff Peterson

Aboard NOAA Ship Oregon II

July 9 – 20, 2018

Mission: Summer Groundfish Survey

Geographic Area of Cruise: Gulf of Mexico

Date: July 19, 2018

Weather Data from the Bridge

Date: 2018/07/19

Time: 16:34:47

Latitude: 29 57.6 N

Longitude: 087 02.60 W

Speed over ground: 7.3 knots

Barometric pressure: 1014.49

Relative humidity: 84%

Air temperature: 26.8 C

Sea wave height: 1 m

Science and Technology Log

We arrived off the coast of Florida on the evening of Sunday, July 15, and sampled stations in the eastern Gulf until the afternoon of Thursday, July 19. We used the same fishing method during this part of the cruise (bottom trawling), but added a step in the process, deploying side scan sonar in advance of every trawl. This measure was taken both to protect sea life on the ocean floor (sponges and corals) and to avoid damaging equipment. The sea bottom in this part of the Gulf—east of the DeSoto Canyon—is harder (less muddy) and, in addition to coral and sponge, supports a number of species markedly different than those seen in the western Gulf.

Side Scan Sonar

In contrast to single-beam sonar, which bounces a single focused beam of sound off the bottom to measure depth, side scan sonar casts a broader, fan-like signal, creating nuanced readings of the contour of the ocean floor and yielding photo-like images.

Towed Side Scan — How side scan sonar works: The harder the object, the stronger the image returned. See: https://oceanservice.noaa.gov/education/seafloor-mapping/how_sidescansonar.html#

Rigged and ready for deployment. Signals from the sonar are conducted up the cable and picked up by the electrically powered lead on the block.

Side scan sonar just beneath the surface & descending.

When we arrive a station in this part of the Gulf, we begin by traversing, covering the usual distance (1.5 miles), but then turn around, deploy the side scan sonar, and retrace our course. Once we’ve returned to our starting point, we recover the sonar, turn around again, and—provided the path on the sea bottom looks clear—resume our course through the station, this time lowering the trawl. If the side scan reveals obstructions, it’s a no-go and the station is “ditched.”

Coming about before deploying the side scan sonar.

And Now for Something Completely Different . . . Fish of the Eastern Gulf

Off Panama City, Florida – Tuesday morning, July 17, 2018

We spent the first half of this leg of the survey in the western Gulf of Mexico, going as far west as the Texas-Louisiana border. The second half we’re spending in the eastern Gulf, going as far east as Panama City. From here we’ll work our way westward, back to our homeport in Pascagoula.

Thanks to different submarine terrain in the northeastern Gulf—not to mention the upwelling of nutrients from the DeSoto Canyon—it’s a different marine biological world off the coast of Florida.

Here’s a closer look at the submarine canyon that, roughly speaking, forms a dividing line between characteristic species of the western Gulf and those of the eastern Gulf:

Bathymetric map of the Gulf of Mexico, with proposed dive sites for Operation Deep-Scope 2005 indicated by red arrows and yellow numbers. Site #1 is on the southwest Florida Shelf in the Gulf of Mexico, where deep-water Lophilia coral lithoherms are found. **#2 is DeSoto Canyon, a deep erosional valley where upwelling of deep nutrient rich water means greater animal abundances.** #3 is Viosca Knoll, the shallowest site, where spectacular stands of Lophelia provide abundant habitat for other species. See: https://oceanexplorer.noaa.gov/explorations/05deepscope/background/geology/media/map.html

And here’s a selection of the weird and wonderful creatures we sampled in the eastern Gulf. As this basket suggests, they’re a more brightly colored, vibrant bunch:

Basket of catch — A basket of fish. Upper right: Lane Snapper, *Lutjanus synagris*. On the left: Sand Perch, *Diplectrum formosum*. The plentiful scallops? *Argopecten gibbus*.

Sand Perch, Diplectrum formosum — Sand Perch, *Diplectrum formosum*

Razorfish, Xyrichtys novacula — Razorfish, *Xyrichtys novacula*

Angelfish, Holacanthus bermudensis — Angelfish, *Holacanthus bermudensis*

Angelfish closeup — *Holacanthus bermudensis* details: tail fins (front specimen), pectoral fin & gill (behind)

Jackknife Fish, Equetus lanceolatus — Jackknife Fish, *Equetus lanceolatus*

Pink Shrimp, Farfantepenaeus duorarum. — Pink Shrimp, *Farfantepenaeus duorarum*. Note the signature “pink” spot by my thumb.

Lionfish, Pterois volitans — Invasive scourge of the Gulf: Lionfish, *Pterois volitans*

Scorpionfish (aka Barbfish), Scorpaena brasiliensis

Southern Stargazer, Astroscopus y-graecum (juvenile)

Ocellated Moray Eels, Gymnothorax saxicola

Video credit: Will Tilley

Mysterious debris: A bottom-dwelling payphone?

Personal Log

Our move into the eastern Gulf marks the midpoint of the cruise, and we’ll be back to Pascagoula in a few short days. The seas haven’t been as serenely flat as they were in the eastern Gulf, nor has the sky (or sea) been its stereotypically Floridian blue, but I’ve found life aboard ship just as pleasurable and stimulating.

storm — A squall on Monday morning, July 16, 2018. Off the stern there to starboard, Blackfin Tuna were jumping.

In my final blog post, I’ll have more to say about all the great folks I’ve met aboard NOAA Ship Oregon II—from its Deck Department members and Engineers, to its Stewards and NOAA Corps officers and inimitable Captain—but here want to reiterate just how thoughtful and generous everybody’s been. The “O2” is a class act—a community of professionals who know what they’re about and love what they do—and I couldn’t be more grateful to have visited their world for a while and shared their good company.

Busy as we’ve been, I haven’t had much time for sketching during this part of the cruise, and, as the selection of photos above suggests, I’ve concentrated more on taking pictures than making them. Still, I’ve begun a small sketch of the ship that I hope to complete before we reach Pascagoula. It’s based on a photograph that hangs in the galley, and that I’m going to attempt to reproduce actual size (3 3/8” x 7”) . Here’s where things stand early on in the process:

IMG_8230 2.jpg — Work in progress: sketch of NOAA Ship *Oregon II*

Did You Know?

Any of the western Gulf fish in the basket from my last blog post? Here it is again:

And here is a visual key to the four species I was fishing for, each figuring prominently in my blog post for July 15:

Basket of fish revision — Basket of Fish from Western Gulf: now color-coded

1: Red Snapper, Lutjanus campechanus

2: Longspined Porgy, Stenotomus caprinus

3: Gulf Butterfish, Peprilus burti

4: Brown Shrimp, Farfantepenaeus aztecus

A few Stenotomus caprinus and Peprilus burti have been left unhighlighted. Can you find them?

July 19, 2017

Anna Levy: What Tummies Tell Us, July 15, 2017

NOAA Teacher at Sea

Anna Levy

Aboard NOAA Ship Oregon II

July 10 – 20, 2017

Mission: Groundfish Survey

Geographic Area of Cruise: Gulf of Mexico

Date: July 15, 2017

Weather Data from the Bridge

Scattered, mild storms continue, causing some delays in our fishing. However, they do lead to beautiful sunsets!

Latitude: 29 18.790 N

Longitude: 84 52.358 W

Air temp: 28.7 C

Water temp: 29.7 C

Wind direction: light and variable

Wind speed: light and variable

Wave height: 0.3 meter

Sky: 80% cloud cover, no rain

Science and Technology Log

TAS Anna Levy removes the stomach of a red snapper.

Data about the number and size of individual organisms can tell us a lot about the health of an overall population of a species. However, it doesn’t tell us much about the role that species plays in its community. If we want to understand that better, we need to know more about how it fits into its food web – what it eats and what eats it. If you were trying to collect information about what a fish eats, where would you look first? Its stomach!

So, after we measure certain species, we dissect them and remove their stomachs. We place each stomach in its own tiny bag, with a bar code that identifies which individual fish it belonged to. Back at a lab on land, scientists will carefully examine the contents of the stomachs to better understand what each species was eating.

The bar codes that we use to label specimens.

factc_240 — This map shows the native range of lionfish. Credit: http://oceanservice.noaa.gov/facts/lionfish-facts.html

For example, one of the fish currently under investigation in the Gulf of Mexico is the lionfish. This is an invasive species, which means that it is not native to the area. Its natural habitat is in parts of southern Pacific and Indian oceans, but it was first spotted in the Atlantic, off the coast of North Carolina, in 2002. Lionfish were most likely introduced to this area by humans, when they no longer wanted the fish as an aquarium pet. By 2010, its range had expanded to include the Gulf. And, with no natural predators in this area and rapid rates of reproduction, its numbers have increased exponentially.

Early dietary studies, which were focused on the lionfish in the Atlantic, show that the lionfish is a generalist. This means that, while it prefers to eat small reef fish, it is able to eat a wide variety of organisms including benthic invertebrates (like crabs) and other fish. This flexibility makes lionfish even more resilient and able to spread. These studies also found that lionfish stomachs were rarely empty, suggesting that they are highly successful predators, able to out-compete other top predators for food.

This has wildlife experts concerned about the impact lionfish will have on natural ecosystems. It is possible that lionfish will over-consume native species, causing native ecosystems to collapse. It is also possible that lionfish will out-compete and displace native, high level predators, like snapper and grouper. Scientists are working now to develop methods to try to manage this invasion.

Because ecosystems here are different from those in the Atlantic, scientists are now turning their attention to studying the lionfish in the Gulf of Mexico. The work that we did on the boat today should help them do just that!

NOAA biologist and Field Party Chief Andre DeBose and graduate student Dedi Vernetti inventory the lionfish caught at one station.

FPC Andre DeBose with lionfish

To see the results of one such study, completed in 2014, see:

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0105852

For more information and photos about the lionfish, please see:

https://oceanservice.noaa.gov/education/stories/lionfish/lion02_invade.html

https://oceanservice.noaa.gov/facts/lionfish-facts.html

http://www.fisheries.noaa.gov/mediacenter/2015/05/21_05.html

Personal Log

Often times, we teachers struggle to convince our students that, while all of the modern technology we have is great, they also need to understand how to solve problems without relying on it. (Most of us have probably been on at least one side of the old, “no, you don’t need a calculator to multiply by 10!” argument at some point in life.) Well, in the past couple of days, I’ve seen two great examples of this onboard the ship.

The first relates directly to our survey work. Our CTD, the equipment mentioned in last post, has two sensors that both detect how much dissolved oxygen is in the water. Having two instruments collecting the same information (sometimes called redundancy) is important, not only so that there is a back-up in case one breaks, but also so that we can tell if they are measuring accurately.

The two oxygen sensors have been reading differently – one was about 0.7 mg/L lower than the other. This is an indication that one needs to be calibrated – but which one? To find out, Alonzo Hamilton, one of the senior NOAA scientists, used a classical chemical analysis technique called titration.

This is the titration equipment found in the chemical lab on board the ship.

In a chemical titration, one substance is slowly added to another, while the scientist watches for a chemical reaction to occur. If you know how the two substances react, you can determine how much of the second substance is present, based on how much of the first was added to make the reaction happen.

Based on the results of his titration, Alonzo was able to determine which of the oxygen sensors was reading accurately. So, it definitely goes to show that there are important applications for that classic high school chemistry!

The binnacle that houses the ship’s magnetic compass.

The other example relates more to the ability to navigate the ship. NOAA Ship Oregon II is equipped with advanced electronic navigation software, Gyro compass, radar, and GPS systems. However, when I was exploring the top deck (flying bridge) of the ship, I came upon this strangely low-tech looking instrument. I asked ENS Chelsea Parrish, a NOAA Corps Officer and member of the wardroom, about it. She explained that it is called a “binnacle,” a safeguard that houses a magnetic compass! The magnetic compass is the same type of technology used by mariners back in the 1300’s. It is critical to have in case of a power outage or other disruption to the ship’s electronic navigation technology.

Did You Know?

While they typically live in cold waters, there is one pod of orca whales (aka killer whales) that resides, year-round, in the Gulf of Mexico. It’s rare to see them, but I’m keeping my eyes peeled!

Dolphins, on the other hand, seem to be everywhere out here. I’ve caught at least a glimpse of them every day so far. In fact, a group of them swam up to investigate our CTD today as it was being lowered into the water.

Questions to Consider:

Research: Some other famous invasive species in our oceans include the green crab (Carcinus maenas), killer algae (Caulerpa taxifolia), a jellyfish-like animal called a sea walnut (Mnemiopsis leidyi), a marine snail called rapa whelk (Rapana venosa), and the zebra mussel (Dreissena polymorpha). Where did each of these originate? How did they come to inhabit their invaded areas? What impact are they having?

Brainstorm: What measures could you imagine taking to manage some of these species?

Research: The specific type of titration used to determine the amount of dissolved oxygen in water is called the Winkler method. How does the Winkler method work?