NOAA Teacher at Sea
Denise Harrington Almost Aboard NOAA Ship Rainier April 6 – April 18, 2014
Mission: Hydrographic Survey Geographical area of cruise: North Kodiak Island Date: March 28, 2014
My name is Denise Harrington, and I am a second grade teacher at South Prairie Elementary School in Tillamook, Oregon. Our school sits at the base of the coastal mountain range in Oregon, with Coon Creek running past our playground toward the Pacific Ocean. South Prairie School boasts 360 entertaining, amazing second and third grade students and a great cadre of teachers who find ways to integrate science across the curriculum. We have a science, technology, engineering and math (STEM) grant that allowed me to meet Teacher at Sea alumni, Katie Sard, who spoke about her adventures aboard NOAA Ship Rainier. I dreamed about doing something similar, applied, and got accepted into the program and am even on the same ship she was!
In Tillamook, we can’t help but notice how the tidal influence, flooding and erosion affect our land and waters. Sometimes we can’t get to school because of flood days. The mountainside slips across the road after logging, and the bay fills with silt, making navigation difficult. As a board member for the Tillamook Estuaries Partnership (TEP), I am proud to see scientists at work, collecting data on the changing landscape and water quality. They work to improve fish passage and riparian enhancement. Working with local scientists and educators, our students have also been able to study their backyard, estuary, bays and oceans.
Now that we have studied the creek by our school, the estuary and Tillamook Bay, with local scientists, it seems to be a logical progression to learn more about our larger community: the west coast of the North American Continent! I hope the work we have done in our backyard, will prepare students to ask lots of educated questions as I make my journey north on Rainier with scientists from the National Oceanic and Atmospheric Administration (NOAA) north to Alaska.
NOAA has the best and brightest scientists, cutting edge technology and access to the wildest corners of the planet we live on. And I have got the most amazing assignment: mapping coastal waters of Alaska with the best equipment in the world! NOAA Ship Rainier is “one of the most modern productive hydrographic survey platforms of its type in the world.” Rainier can map immense survey areas in one season and produce 3-D charts. These charts not only help boaters navigate safely, but also help us understand how our ocean floor is changing over time, and to better understand our ocean floor geology and resources, such as fisheries habitat. Be sure to check out the Rainier link that tells more about the ship and its mission. http://www.moc.noaa.gov/ra
Rainier is going to be doing surveys in “some of the most rugged, wild and beautiful places Alaska has to offer,” says the ship’s Commanding Officer CDR Rick Brennan. I am so excited for this, as an educator, bird surveyor, and ocean kayaker. After departing from Newport, Oregon on April 7th, we will be travelling through the Inside Passage of British Columbia, the place many cruise ships go to see beautiful mountains and water routes. I have many more questions than I do answers. What kinds of birds will I see? Will I see whales and mountain peaks? Will the weather cooperate with our travels? Will the crew be willing to bear my insatiable questions?
Once we are through the Inside Passage, we will cross the Gulf of Alaska, which will take 2 ½ days. As we pass my brother’s home on the Kenai River, I will wave to him from the bow of Rainier. Will he see me? I think not. Sometimes I forget how big and wild Alaska is. Then we will arrive on the north side of Kodiak Island where we will prepare for a season of survey work by installing tide gauges.
I always love to listen to students’ predictions of a subject we are about to study. What do I know about tide gauges? Not a lot! Even though I can see the ocean from my kitchen window, I cannot claim to be an oceanographer or hydrographer. I had never even heard the word “hydrographer” until I embarked on this adventure! I predict I will be working with incredibly precise, expensive, complicated tools to measure not just the tide, but also the changes in sea level over time. I am excited to learn more about my neighbor, the ocean, how we measure the movement of the water, and how all that water moving around, and shifting of the earth affects the ocean floor. I am proud to be a member of the team responsible for setting up the study area where scientists will be working and collecting data for an entire season. It will surely be one of the greatest adventures of my lifetime!
Here are my two favorite travelling companions and children, Martin and Elizabeth.
In my final days before I embark, I am trying to pick up the many loose ends around the Garibaldi, Oregon home where I live with my dorky, talkative 18 year old son and 16 year old daughter who take after their mother. They share my love of the ocean and adventure. When they aren’t too busy with their friends, they join me surfing, travelling around the world, hiking in the woods, or paddling in our kayaks. Right now, Elizabeth is recovering from getting her tonsils out, but Martin is brainstorming ways to sneak my bright orange 17 foot sea kayak onto Rainier next week. I moonlight as a bird surveyor, have taxes to do and a classroom to clean up before I can depart on April 6. Once Rainier leaves Newport, I will become a NOAA Teacher at Sea, leaving Martin, Elizabeth and my students in the caring hands of my supportive family and co-workers.
Here I am having fun with kayaking friends in California in December.
Having gone through the Teacher at Sea pre-service training, I feel more prepared to help the crew, learn about all the jobs within NOAA and develop great lesson plans to bring back to share with fellow educators. I want to bring back stories of scientists working as a team to solve some of our world’s most challenging problems. And I am looking forward to being part of that team!
NOAA Teacher at Sea Susy Ellison Aboard NOAA Ship Rainier September 9 – 26, 2013
Mission: Hydrographic Survey Geographic Area: Carbondale, CO Date: November 5, 2013
Weather: You can go to NOAA’s Shiptracker (http://shiptracker.noaa.gov/) to see where the Rainier is and what weather conditions they are experiencing while I am back at school in Glenwood Springs, CO.
GPS Reading: 39o 24,13146 N 107o 12.6711 W
Temp: -8C
Wind Speed: 0
Barometer: 1026.00 mb
Visibility: Clear
Science and Technology Log
How do you become a hydrographer? After spending 2 ½ weeks aboard the Rainier as a Teacher at Sea, I found that this question had as many answers as the ship had hydrographers. In fact, if you take time to concatenate the data (obviously, I have become fond of my newest vocabulary word!), you will learn that being a hydrographer is incredibly multi-faceted and is a confluence of ocean-, cartographic-, and computer-based sciences, with some outdoor skills thrown in for good measure.
Cdr Rick Brennan and some of the hydrographers of the future in Cold Bay, Alaska
The Rainier’s CO, Commander Rick Brennan, finished college with a degree in Civil Engineering. In 1991, his senior year, he discovered NOAA when a professor suggested he check out the NOAA Corps during a recruiter’s visit to campus. He started as a NOAA Corps member in 1992 and has been involved in hydrographic survey work ever since. His studies in the NOAA Corps training included coursework on ships, radar, and navigation, and led to his appointment as Commanding Officer (CO) of the NOAA Ship Rude (http://www.moc.noaa.gov/Decomm Ships/ru-index.html). This ship was NOAA’s smallest hydrography vessel at only 90’ long.
Commander Brennan has seen many changes in hydrography during his career. First and foremost, has been its evolution as an academic discipline. The University of New Hampshire, based in Durham, NH, founded the Center for Coastal and Ocean Mapping in 1999. Their Joint Hydrographic Center was created through a partnership between the University and NOAA. (http://ccom.unh.edu/about-ccomjhc, http://www.eos.sr.unh.edu/) Prior to this, hydrography was part of more general courses in oceanography. Now, you can get a Master’s Degree in Hydrography.
The last 20+ years have also seen significant changes in hydrographic technology, especially in the tools used to map the ocean floor. Prior to 1994, hydrographic vessels were outfitted with single beam sonar, instead of the multi-beam sonar that is today’s standard. The single beam only provided bathymetric data at a single position on the seafloor directly below the vessel, while multi-beam sonar can give us high resolution information about the seafloor across a swath of the seafloor stretching several hundred meters to either side of the vessel. The Rainier, as NOAA’s premier hydrography vessel, was fully outfitted with multi-beam sonar by 1998. Other technological advances have included significant changes in information processing, from the days of paper tape and punch card programming, to the development of hydrography-specific data analysis programs such as CARIS.
While data collection capabilities have changed exponentially over the past 20 years, CDR Brennan noted changes in how that data is used. NOAA has set the industry standard worldwide for collecting hydrographic data. Departments within NOAA are able to use that data to more than make charts. Fisheries biologists can use the detailed seafloor information in their assessments of ecosystem health and the availability of suitable prey species for all parts of the complex ocean-based food web. Shorelines are dynamic; charting plays a role in establishing baseline data in a changing world. Brennan foresees a future where navigators will view charts using a variety of platforms besides merely lines on paper; this will take educating mariners in how to utilize some of the new electronic tools that are available.
Brennan reflected that, while there have been significant advances in the field of hydrography, there is still much work to do. NOAA publishes an annual review of its hydrographic survey goals (http://www.nauticalcharts.noaa.gov/hsd/NHSP.htm) . While this might not sound like the most scintillating of reads, it’s a fascinating look at the enormity of the concept of charting our coastline. Depending on how you view coastline—is it a smoothed-out line of the coast, does it include all the ins and outs and bays, or does it include all the United States’ navigable coastline extending out 200 nautical miles—one thing is certain, there’s a lot of it. In Alaska, alone, NOAA has identified 324,465 square nautical miles as Navigationally Significant. The identified total for all of the United States, including the Caribbean, is 511, 051 square nautical miles. Alaska is big! The crew of the Rainier will have plenty of work!
Chief Survey Technician Jim Jacobson at work in the computer lab
Chief Survey Technician Jim Jacobson’s favorite area to survey is Southeast Alaska with its varied topography, underwater features, and interesting ports. He should know, since he’s been a member of the Rainier’s survey crew since 1990. Jim graduated from the University of Washington with a degree in Oceanography—at that time there were no hydrography-specific programs. When he began, a large part of the training consisted of good old, OJT—on the job training, learning new skills as new equipment and techniques became available. Needless to say, there have been more than a few changes over the past 20+ years.
Jim began his career before GPS was a part of hydrographic survey. Setting benchmarks to establish sea levels was done using transits and theodolites, triangulating from known points on land to establish location and elevation on shore. Information was transmitted using microwave towers that were erected on site. Fast forward to 2013, where GPS is part of everyone’s vocabulary and the ability to know ‘exactly’ where you are is often in the palm of your hand. The Rainier’s tide gauge stations are set using GPS units that can identify location and elevation to within centimeters.
He also began his career using single beam sonar, instead of today’s multi-beam. While single beam doesn’t have the pinpoint accuracy that multi-beam sonar might offer, there were a few advantages. It was a faster way to collect data, since you weren’t collecting as much information with each ‘ping’. Thus, you could complete more ‘sheets’ (an identified area for mapping) during your time at sea.
There have been incredible advances in data analysis since Jim started on the Rainier. Data collected each day has become more complex, requiring more hours of ‘cleaning’ to remove extraneous pings and information. Hydrographers use increasingly complex computer software to produce charts, often spending up to 5 hours to process one hour’s data.
What’s next? Jim imagines a future with underwater mapping done by ROVs, remotely operated vehicles, cruising the seafloor to send back terabytes of information. ROVs are already used in a variety of information-gathering capacities, sending back high-quality video of seafloor conditions, information on water chemistry, or video of marine life from far below the surface.
Here’s what hasn’t changed–hydrographers work in all sorts of weather and ocean conditions!
Christi Reiser didn’t start out planning to be a hydrographer. She has, perhaps, the most diverse resume of any of the survey team. Christi is currently a college student, and will be receiving her BA in Geography from the University of Colorado, Denver at the end of this year. Her hydrography career began in May, 2012 when she was hired as an intern on the Rainier, earning college credit while working for NOAA.
Christi Reiser
Since high school, Christi has earned an Associate’s Degree in Business, was employed as a saddle maker in Austria, and worked for an oil company as a mapping technician. While all of those pathways gave her something to ponder, it was the GIS part of her mapping job that really ignited the fire that sent her back to college to pursue a degree in Geography with a focus on GIS and a minor in Environmental Science. To further stoke that fire, Christi worked to design and pursue an internship experience that would allow her to ‘test drive’ a career combining GIS, hydrography, and life on the high seas. Through a combination of motivation, Google-based searching, a diverse and applicable set of educational and experiential skills, and the courage to make some phone calls and take a few risks, Christi ended up on the Rainier, working as a paid intern. How cool is that? She earns college credit, gains expertise working with challenging software and data acquisition programs and equipment, charts the uncharted ocean floor, and sees parts of Alaska that aren’t on the usual tourist’s destination list. One of her projects during her first season on the Rainier was the creation of an online blog describing her work. You can check it out at http://rainierinternship.blogspot.com/
Through her internship Christi has found that NOAA is one of the most education-oriented organizations she has worked for, constantly providing opportunities to learn new skills and information. She is excited to be working in a GIS-based field and considers it to be one that is ‘never-ending’, since only 4% of the sea floor has been mapped! After graduation, her next step may be a Master’s Degree in Geography, to add more science research experience to her knowledge base. After that? Well, all I can say is that Christi plans to create a new job that “doesn’t even exist”. Stay tuned.
So, the next time you’re talking to your guidance counselor about college plans, or wondering what you might want to be when and if you grow up, consider the field of hydrography. Where else do you get to wear a life jacket to work?
Field Operations Officer (FOO)Meghan McGovern goes over the Plan of the Day. Where else do you get to wear a life jacket to work?
Personal Log
Now that I’ve been home a few weeks, it’s time to reflect on my Teacher at Sea experience. I’ve been asked, more than once, “Did it meet my expectations”? That’s an easy question to answer—the answer is “No, it exceeded my expectations!” I came away from my time on the high seas with much more than just knowledge of the complexities of seafloor mapping. As a firm believer in the concept that ‘everything is interesting’, it would be hard to point to any aspect of my trip that wasn’tsomething fun and interesting to learn!
The science of hydrography is amazing. Just thinking about mapping something that you can’t actually see is an incredible concept. I have always been fascinated with maps and the process of creating a map, but I look at those maps a little differently now, going beyond the story the map tells to thinking about how that map was made. The science of mapping has undergone many changes since those first sailors with their lead lines creating maps of harbors and shorelines. In case you’re still wondering why hydrography and the Rainier’s mission is so important, check out this clip from a PBS special that aired in September–http://www.pbs.org/newshour/bb/climate-change/july-dec13/arctic_09-17.html
The teamwork, efficiency, and camaraderie on the ship were a common thread uniting each day’s activities. Each crew member played a role in the success of the ship’s mapping mission. It took everyone from the engine room to the bridge to keep it all ‘shipshape’. There was really no job too small—everything and everyone had a necessary role. I especially appreciated the fact that every crew member was willing to answer the myriad questions I had; from specific questions about their job to questions about how they ended up on the Rainier.
Perhaps we should have used some of our sonar capabilities to search for the pot of gold at the end of this rainbow!
At the end of my Teacher at Sea experience I have to conclude that NOAA is one of our country’s best kept secrets. What other federal agency can bring you such treats as the daily weather report or tide predictions for an entire year, monitor fisheries along our coastal areas, keep track of our changing climate, or survey marine mammals? Of course, you shouldn’t forget all those nautical charts produced by the hydrographers on the Rainier. NOAA’s webpage says it all (http://www.noaa.gov/); from the ocean floor to the top of our atmosphere—and everything in-between. In a world with a rapidly changing climate I can’t think of an agency that is doing more important work.
Many thanks to NOAA and the Teacher at Sea program for providing me with this incredible learning experience.
NOAA Teacher at Sea Susy Ellison Aboard NOAA Ship Rainier September 9-26, 2013
Mission: Hydrographic Survey Geographic Area: South Alaska Peninsula and Shumagin Islands Date: September 13, 2013
Weather: current conditions from the bridge
You can also go to NOAA’s Shiptracker (http://shiptracker.noaa.gov/) to see where we are and what weather conditions we are experiencing
GPS Reading: 55o 15.037’ N 162o 38.025’ W
Temp: 10.44C
Wind Speed: 9.8 kts
Barometer: 1021.21 mb
Visibility: foggy on shore
Science and Technology Log
Since leaving Kodiak 5 days ago, I have been immersed in a hydrographic wonderland. Here’s what I’ve learned, summed up in two words (three, if you count the contraction); it’s complicated. Think about it. If I asked you to make a map of the surface of your desk you could, with a little bit of work and a meter stick, make a reasonably accurate representational diagram or map of that surface that would include the flat surface, as well as outlines of each item on the surface and their heights relative to that surface, as well as their location relative to each other on a horizontal plane. You might want to get fancy and add notes about the type of surface (is it wood, metal, or some sort of plastic), any small irregularities in that surface (are there some holes or deep scratches—how big and how deep?), and information about the types of objects on the desk top (are they soft and squishy, do they change location?). Now, visualize making this same map if your desktop was underwater and you were unable to actually see it. Not only that, the depth of the water over your desktop can change 2 times each day. If that isn’t complicated enough, visualize that the top of the water column over your desk is in constant motion. OK, not only all those variables, but pretend you are transformed into a very teeny person in a small, floating object on that uncertain water over the top of your desk trying to figure out how to ‘see’ that desktop that you can’t actually see with your own eyes? Welcome to the world of the hydrographer; the challenge of mapping the seafloor without actually touching it. It is, indeed, a complex meld of science, technology, engineering, and math (STEM, in educational parlance), as well as a bit of magic (in my mind).
How do you know what’s down there?
Challenge number one—how do you measure something you can’t see or touch with your own hands? Long ago, sailors solved that obstacle by using a lead line; literally, a line with a lead weight attached to the end. They would drop the weighted line over the side of their ship to measure the depth. These soundings would be repeated to get enough data to provide a view of the bottom. This information was added to their maps along with estimates of the horizontal aspects (shoreline features and distance from the shoreline) to create reasonably good charts that kept them off most of the underwater obstacles. A simple solution to a complex problem. No electricity required, no advanced degrees in computer science needed, no calculus-based physics necessary. Fast- forward to 2013 and the world of complex calculations made possible by a variety of computer-based algorithmic calculations (i.e. some darn fancy computing power that does the math for you). The NOAA Ship Rainier’s hydrographers use sound as their lead line, traveling in small boats known as launches that are equipped with multibeam sonar that send a series of sound ‘pings’ to the ocean floor and measures the time between sending and receiving the ping back after its trip to the bottom. Sounds simple enough, doesn’t it? If it were all that simple I wouldn’t be typing this in a room on the Rainier filled with 20 computer monitors, 10 hard drives, and all sorts of other humming and whirring electronic devices. Not only that, each launch is equipped with its own impressive array of computer hardware.
One of the launches is lowered from the ship.
So far on our survey days 2 launches have been sent out to cover identified transects. Their onboard crew includes a coxswain (boat driver), as well as 2-3 survey technicians and assistants. Each launch is assigned a polygon to survey for the day.
EVERY PING YOU TAKE…
Once they arrive at their assigned area, it’s time to ‘mow the lawn’—traverse back and forth systematically collecting data from one edge of your assigned polygon to the other until the entire area has been surveyed. Just in case you haven’t realized it yet, although that sounds pretty straightforward, it isn’t. Is the area shallow or deep? Depth affects how much area each traverse can cover; the sonar spreads out as it goes downward sending it’s little pings scampering to the ocean floor. Visualize an inverted ‘V’ of pings racing away from the sonar towards the sea floor. If it’s deep, the pings travel further before being bounced back upwards. This means that the width of each row the sonar cuts as it “mows the lawn” is wider in deeper water, and narrower in shallow. Shallower areas require more passes with the launch, since each pass covers a more limited area than it might if the water were deeper. As the launch motors back and forth ‘mowing the lawn’, the sonar signature is recorded and displayed on monitors in the cabin area and in front of the driver. Ideally, each lap overlaps the previous one by 25-50%, so that good coverage is ensured. This requires a steady hand and expert driving skills as you motor along either over or parallel to ocean swells. All you video gamers out there, take note–add boat driving to the repertoire of skills you might need if you want to find a job that incorporates video gaming with science!
One of the monitors displays the sonar. The green line is the seafloor. This image shows that the deeper the sea, the wider the swath that is covered with each pass of the launch.Calvin Burch uses a computer monitor to guide him as he drives the launch. It’s an art to ‘mow’ in straight lines while anticipating every roll and bounce of the ocean’s surface.
Here’s a small list of some of the variables that need to be considered when using sonar to calculate depth; the chemistry of the water column through which you are measuring, the variability of the water column’s depth at specific times of day, the general depth (is it shallow or deep), and the movement of the measuring device itself. So many variables!!
Starla Robinson and Randy Shingledecker set up the program that will enable them to monitor our progress
HOW FAST DOES SOUND TRAVEL?
When you’re basing your charts on how sound travels through the water column, you need to look at the specific characteristics of that water. In a ‘perfect world’, sound travels at 1500m/second through water. In our real world, that speed is affected by salinity (the concentration of salts), temperature, and depth (water pressure). The survey crew uses a CTD meter to measure Conductivity, Temperature, and Depth. The CTD meter is deployed multiple times during the day to obtain data on these parameters. It is attached to a line on the rear of the launch, dropped into the water just below the surface for 2 minutes, and then lowered to near the ocean floor to collect data. After retrieval, it’s hooked to the computer on the launch to download the data that was collected. That data is stored in its own file to use when the data is reviewed in the evening back on board the Rainier. This is one of the variables that will be applied to the sonar data file—how fast was the sound moving through the water? Without this information to provide a baseline the sonar data would not be accurate.
Randy Shingledecker gets ready to send the CTD over the side. It’s clipped into a stout line and a reel for lowering it.The CTD is lowered to just above the seafloor to collect data on Conductivity, Temperature, and Depth. This data will be applied to our sonar data to obtain an accurate sound speed for this area.
ROCKING AND ROLLING…
When you’re out on the ocean in a boat, the most obvious variable is the instability of the surface, itself. This is called ‘attitude’. Attitude includes changes to the boat’s orientation fore and aft (pitch), side-to-side (roll), and up and down (heave) as it is gently, and not-so-gently rocked by ocean swells and waves. This means that the sonar is not always where you think it is in relation to the seafloor. This is like trying to accurately measure the height of something while you, the measurer, are on a surface that is constantly moving in 3 different directions. Good luck. Luckily for this crew of hydrographers, each boat is equipped with a little yellow box whose technical name is the IMU (inertial measurement unit) that I call the heave-o-meter, as we bob up and down on this might ocean. This little box contains 3 gyroscopic sensors that record all those forward and backward pitches, sideways rolls, as well as the bobbing up and down motions that the boat does while the sonar is pinging away. This information is recorded in the launch’s computer system and is applied to the sonar data during analysis back at the Rainier.
This yellow box is the IMU. It’s internal gyros capture information about the boat’s pitch, roll, and heave.
TIME AND TIDE…
Now that you’ve gotten your launch to the correct polygon (using GPS data to pinpoint your location), taken CTD readings to create a sound transmission profile for your transect area, and started up the heave-o-meter to account for rocking and rolling on the high seas, it’s time to start collecting data. Wait—there’s still another variable to think about, one that changes twice daily and affects the height of the water column. You also have to factor in changes in the depth of the water due to tidal changes. (for an in-depth look at how tides work, check out this link: http://oceanservice.noaa.gov/education/kits/tides/tides01_intro.html). At high tide, there’s a greater likelihood that subsurface obstacles will be covered sufficiently. At low tide, however, it’s pretty important to know where the shallow spots and rocks might lurk. NOAA’s hydrographers are charting ocean depths referenced to mean lower low water, so that mariners can avoid those low-water dangers.
You might be asking yourself, who keeps track of all that tide data and, not only that, how do we know what the tide highs and lows will be in an area where there are no other tide gauges? NOAA has tide gauges along many coastal areas. You can go online to http://tidesandcurrents.noaa.gov/and find out predicted tide heights and times for any of these locations. While we are working here in Cold Bay, we are using a tide gauge in nearby King Cove, as well as a tide gauge that the Rainier’s crew installed earlier this summer. More data is better.
Here’s the tide chart from the King Cove tide gauge.
What do you do if you’re surveying in an area that doesn’t have existing tide gauges? In that case, you have to make your own gauge that is referenced to a non-moving point of known elevation (like a rock). For a detailed description of how these gauges are set, check out NOAA TAS blogs from some of the teachers who preceded me on the Rainier. On Wednesday, I helped dismantle a tide gauge on Bird Island in the Shumagin Islands that had been set up earlier this season (check out TAS Avery Martin’s July 12th posting), but had ceased to report reliable data. Our mission on Wednesday was to find out if the station had merely stopped reporting data or if it had stopped collecting data entirely.
Setting off in a skiff to check on the Bird Island tide gauge.
When we arrived at Bird Island we found out exactly why the gauge had stopped sending data—its battery bank had fallen from one rocky ledge to another, ripping apart the connections and breaking one of the plastic battery boxes in the process. That took a lot of force—perhaps a wave or some crazy gust of wind tore the 3 batteries from their mooring. Since each battery weighs over 25lbs, that means that something moved over 75lbs of batteries. Ideally, the station uses solar panels to keep the batteries charged. The batteries power up the station so that data can be sent to a satellite. Data is also stored on site in a data logger, but without power that data logger won’t work.
This is the data logger for the tide gauge. It is housed in a watertight box and was retrieved for downloading on the ship.
We retrieved all the equipment and will be able to download whatever data had been recorded before the system broke. The automated tide gauge is, basically, a narrow diameter air-filled tube that is underwater and set at a fixed depth with a narrow opening pointed downward to the seafloor. The pressure required to balance the air in the tube is equal to the pressure of the water column directly above the opening. The tide gauge measures this pressure and converts it to depth. Pressure/depth changes are recorded every six minutes—or ten times each hour. As it turns out, the damaged battery bank was only one of the problems with this station. Problem number two was discovered by the dive team that retrieved the underwater portion of the gauge; the hose had been severed in two locations. In this case, something had caused the tube to break, so it was no longer connected to the data logger. That must have been some storm!
ENS Carrier inspects the battery bank that rests on a rock ledge 2 feet below where it had been placed weeks ago!The waterproof battery boxes were broken in the tumble.The solar panels that charged the batteries were intact, still tied into bolts in the rocks.The dive crew gets ready to jump inBrrr, it’s chilly work diving in arctic waters. The divers are investigating the gauge and removing the damaged hose
While there, we set to work checking on benchmarks that had been set earlier in the season. We used a transit and survey rods (oversized rulers) to measure the relative heights of a series of benchmarks to ensure accuracy. There are 5 benchmarks along the beach. Each one was surveyed as a reference to the primary benchmark nearest the gauging station. Multiple measurements help ensure greater accuracy.
I am holding the survey rod on top of a benchmark.
I used a level to make sure the rod was plumb–perpendicular to the benchmark. No easy feat with a strong wind blowing!
We also were tasked with checking the primary benchmark’s horizontal location. While this had been carefully measured when it was set back in July, it’s important to make sure that it hasn’t moved. It might seem a crazy concept to think that a benchmark cemented into a seemingly immovable piece of rock could move, but we are in a region that experiences seismic events on an almost daily basis. (You can check out seismic activity at http://www.aeic.alaska.edu/) NOAA Corps Officer ENS Bill Carrier set up a GPS station at the benchmark to collect 4 hour’s data on its position, a process called HORCON (horizontal control). Unfortunately, the winds were in charge of how much data we were able to collect that day, and blew down the station after only 3 hours! [image of station down] Sometimes the best laid plans …..
A gust of wind blew the recording station down.
DATA, DATA, and MORE DATA
While data collection is important, it’s what you do with the data that really gets complicated. Data management is essential when working with so many files and so many variables. Before each launch returns to the Rainier, the day’s data is saved onto a portable hard drive. Immediately after being hauled back up onto the ship, the data is handed off to the ‘Night Processing Team’ and hustled off to the Plotting Room (computer HQ) to be uploaded into a computer. This is where the magic happens and an advanced degree in computer science or GIS (geographic information systems) can come in handy. I have neither of those qualifications, but I know how to read a screen, click a mouse, and follow directions. So, on Friday evening I was ushered into the ranks of ‘night processor’.
When each launch returns to the ship, their day’s data is saved onto a hard drive. This drive is transported to the plotting room to download onto the computer.
First, data is downloaded into the main computer. Each launch’s files are called raw data files and are recorded in the launch’s acquisition logs. Once the data is on the computer, it is important to set up what I call a ‘file tree’; the series of files that increase in specificity. This is analogous to having an accurate list of what files live within each drawer and section of your file cabinet. These files are color-coded according to the operations manual protocols to minimize the chance of misfiling or the data. They are definitely more organized than the files on my laptop—I might change my lackadaisical filing ways after this trip!
Once the data are placed in their folders, the fun begins. Remember, you have files for multiple variables; sonar, CTD casts, the IMU Heave-o-meter, and tide data. Not only that, you have, with any luck, performed multiple casts of your CTD meter to obtain accurate data about the conditions affecting sound wave transmission within your polygon. Now you get to do something I have never done before (and use a vocabulary word I never knew existed and one that I might try to spell in a future Scrabble game); you concatenate your CTD data. Basically, you put the data from all your CTD casts together into one, neat little file. Luckily, the computer program that is used does this for you. Next, you direct the program to add all the variables to your sonar files; the concatenated CTD data, tide data, and IMU data.
Survey Tech Brandy Geiger and NOAA Corpsman ENS Wall begin to upload the data and organize it into files.
Assuming all goes well and you have merged all your files, it’s time to ‘clean’ your data and review it to make sure there are no obvious holes or holidays in the data that was collected. Holidays can occur if the launch was bouncing too much from side to side during data collection and show up as a blank spot in the data because the sonar was out of the water and not pinging off the bottom. You can identify these holidays during the data collection process [holiday signature], but sometimes there are smaller holidays that show up once the data is merged and on your computer screen. There can also be miscellaneous errant pings caused by debris in the water column. Cleaning involves systematically searching each line of your surveyed polygon to identify and delete those ‘bad’ pings. Kind of like photoshopping away the parts of a digital image that you don’t want in the final image. You work methodically in a grid pattern from left to right and top to bottom to ensure that you are covering the whole file. It sounds easy, but to a non-PC person such as myself all that right click, left click, center click stuff was a bit boggling. The program is amazingly complex and, rumor has it, a little bit ‘buggy’ at times.
Multiple screens, multiple tasks. I am learning the art of ‘cleaning’ the data–getting rid of extraneous pings.
After all this, guess what?! You still don’t have a chart. It takes almost 2 years to go from data collection to chart publication. There’s endless amounts of data compilation, reports to be written, and quality control analysis to be completed before the final report and charts are issued.
Personal Log
So far I have spent two nights on the ship ‘in transit’, moving between ports. The other nights have been spent anchored offshore. While the first night at sea was a little bouncy, the second was, in my opinion, the wildest roller coaster ride I have ever taken. Imagine being pulled to the top of a high roller coaster, and released to fly down to the bottom while you are lying flat in your bed. That’s what it felt like as we motored from the Shumagin Islands to an anchorage in Cold Bay. An endless series of up, up, ups, followed by a wild ride down, down, down. Luckily all the drawers and doors have latches that keep them from flying open—although I had a jacket hanging on a hook that seemed to hit the latch on one closet door and actually knock it open—after this happened a couple of times I gave up and put the coat on the floor and firmly shut the door. My bathroom trash can ended up in the shower stall. At one point I heard a loud thump in the dark—and realized my survival suit in its orange bag had fallen from the top bunk to the floor—glad I wasn’t in its way! It was time to just hang on and try not to roll out of bed.
If your chair isn’t tied down, put tennis balls over the wheels to keep it from rolling!Strap the printer tightly to a table!Don’t forget to secure the trashcans!
We finally stopped rocking and rolling around 3 in the morning. I thought maybe I was just a bit sensitive to the rocking motion, but was comforted to find out the everyone agreed that it had been a wild night. In fact, one of the potential ‘hazards’ for our work on Thursday was ‘lack of sleep’.
FOO LT Meghan McGovern goes over the Plan of the Day (POD). Today’s identified hazards included ‘Lack of Sleep’.
After almost a week aboard the Rainier I have been impressed with the teamwork, precision, and overall efficiency which overlays all operations. This crew can get a launch loaded, lowered, and underway in less time than it sometimes takes me to record my morning attendance at school! This is no simple feat (the boat, not the attendance!). It reminds me of a buzzing beehive filled with activity and focused on a single task; data collection. Each day begins on the fantail (the rear of the boat) at 0800 with the FOO (Field Operations Officer) reviewing the POD (Plan of the Day) and a summary of the day’s goals, work assignments, weather, and potential hazards, prior to sending out the survey crews.
The Boatswain (bo’sun) directs the next part of this tightly choreographed activity, as the launches are lowered by their davits (small cranes), while lines and hooks are handled with an eye to safety and efficiency. Within 5 minutes the two launches have been lowered, loaded with crew and supplies, and are on the water, buzzing away from the hive like bees to perform their daily waggle dance as they move back and forth collecting hydrographic data.
At 1630 they return to the hive, filled with the sweet nectar of hydrographic data. Launches are lifted back onto the ship and the data is whisked off to the computer room for downloading. 5 Minutes later a survey team debrief is held to review work accomplished that day and any problems that may have come up so that plans can be made for the next day’s work. This crew is organized!!
We cast off yesterday morning at 1000 hrs, RST—Rainier Ship Time. Although we are still in the Alaska Daylight Savings time zone, our time on the ship has been adjusted backwards 1 hour to give us more daylight during ‘working hours’. Since the ship is its own floating universe, time that is referenced to a specific time zone is not as important as time that is referenced to our day and the work that needs to be completed. Einstein would be pleased to see that time is, indeed, relative here aboard the Rainier!
There is science involved just to leave port and set forth on this cruise. There’s data to be collected, such as a weather forecast—and decisions to be made based on that data. Today’s weather report called for rain and high winds. That data input resulted in a travel plan including taking a more protected route north of Kodiak Island instead of heading out to more open water right away. We didn’t reach the wide-open spaces until evening, and I was lulled to sleep by the endless rocking and rolling of the boat.
We needed to take out the trash before we left.Heading into the Shelikof Strait
Science can also include the protocols needed to keep everyone on board safe and healthy during a cruise. With that in mind, I spent part of the day learning about the ship and the safety routines we need to follow. Ensign Wall gave me my survival suit, aka Gumby Suit and showed me how to don that lifesaving apparel. The suit is a foam-filled drysuit, providing insulation and floatation in one handy, non-form-fitting package. They are, apparently, one size fits none, but when it’s a matter of survival, I doubt that style counts for too many points!
Each person aboard is assigned stations to report to in case of fire or in case it becomes necessary to abandon ship. I found out that I go to the Boat Shop near the stern in case of fire, and that I head to Station 1 near the bridge. We had a fire drill in the afternoon, followed by an abandon ship drill. Much like fire drills at school, it’s a good time to practice and figure out the best way to get to where you need to go. Since I’m still learning my way around the ship, it was especially important to figure out where I needed to go and how to get there.
Where do I go?Trying on my Gumby suit
Then there’s the ‘real’ science—the science of hydrography and the point of this entire venture. The NOAA Ship Rainier has been tasked with charting (creating maps) of the Shumagin Islands and Cold Bay areas. It’s amazing to think that there are still some parts of our coastline that haven’t been charted. I spent much of this afternoon talking with the scientists who are making these maps and came away with the overwhelming sense that this is, indeed, a complicated and multi-faceted process. I’ll be writing separate journals on all the science that goes into creating these detailed maps of the ocean floor. If you just can’t wait and need to know more right now, check out the blogs from previous TAS teachers on the Ship Rainier.
Personal Log
Much of my first day at sea was spent getting used to being aboard a large floating object on a rather bumpy sea. Our day was spent in transit, from Kodiak to the Shumagin Islands, around 28 hours away.
My very first rainbow at sea!
There’s a lot to learn about life on board the Rainier. Most important has been orienting myself and figuring out where everything is located. Decks are labeled from ‘A’, the lowest, to ‘G’, the uppermost deck area. My quarters are on the ‘E’ deck. The Galley, where food is prepared and served, is on the ‘D’ deck below me, and the Bridge (steering and control of the ship) is above me on the ‘F’ deck.
I have my own room—kind of luxurious living! There’s a bunk, the head (bathroom), a couple of closets, drawers, and even a small fold-down desk area so that I can write my journals. Every drawer latches tightly to minimize the chance of unidentified flying objects if we hit some rough weather.
Home, sweet home.
I took a short tour of some of the more esoteric parts of the ship, including a visit to the cofferdam, whose access was through a hatch and down a ladder hidden in one of the heads (bathrooms). This is sort of like accessing the crawl space under your house through a small tunnel in your bathroom. While we speculated on just what purpose this area served (storage, poor planning in designing the hull and layout, a random skinny place to hang out?), it turns out that it is a watertight compartment that separates the contact between liquids that might be in the bow area and those in the stern area of the ship.
Starla Robinson leads us down the hatch into the cofferdamLt. Quintero in the cofferdam.
There was also an escape hatch that was incredibly heavy to lift—but I am sure you could lift it if your life depended on it! I don’t plan on having to test this thing out!!
Weather Data from Newport, OR: GPS location: 44°38’12.63” N, 124°3’12.46”W
Sky condition: OVC
Air temperature: 10.6°C
The sun rising as we finished our transit back to Kodiak.
Science and Technology Log
During my final days aboard the NOAA Ship Rainier, I began to understand the big picture of all that goes in to hydrographic survey. While we were transiting from the Shumagin Islands back to the Coast Guard Base in Kodiak, the scientists invited me to sit in on a survey review meeting. During the meeting I listened as the Commanding Officer (CO), the Chief Survey Technician, the Field Operations Officer (FOO), the sheet manager, and others went over the Descriptive Report for a project that had been completed on a previous leg in Behm Canal. It was interesting to listen to the conversation and actually understand what these researchers were talking about! I felt as though it was appropriate for me to attend this meeting on my final day on the ship, as this truly is the last step for the scientists on board before the chart and attached data are sent off the ship to the Pacific Hydrographic Branch where the data is further processed in order to ensure accuracy of the data. As I have now participated in most parts of the survey process, allow me to show you a step-by-step explanation of hydrographic survey from start to finish.
Step One: Getting to the Survey Location
Several NOAA Corps Officers on the bridge while coming in to port in Kodiak.
It takes a dedicated and skilled team to safely navigate the ship to the correct survey location. It is also important that the FOO conducts a survey meeting to review the plan of the leg with the research crew. When I sat in on this survey meeting at the start of the leg the crew discussed what has been accomplished to date, which sheets we would be focusing on during this leg, and any technical issues that needed to be reviewed with the team.
Step Two: Setting up Vertical and Horizontal Control Stations
Brandy Geiger (left) and Bill Carrier (right) work on equipment that was set-up on Bird Island as a vertical and horizontal control station.
Before data can be collected, it is necessary to have a reference of where the data is being collected. As I discussed in a previous post, tidal gauges are set-up prior to survey in order to guarantee accurate water depths. The NOAA Ship Rainier is currently setting up a tidal gauge near Cold Bay, Alaska so that they may begin working in their upcoming survey location. You can track the Rainier at http://shiptracker.noaa.gov/
Step Three: Running Shoreline Verification
Before the launches (small boats) are able to get data close to the shore, it is important for the skiff to visually check the shoreline to make sure that there are no major hazards to navigation. The shoreline crew is responsible for marking any dangers, and getting close enough to shore to decide where the sheet limits should be set. These sheet limits dictate how close the shoreline and rock formations are that the launches need to survey.
Step Four: Data Collection on Ship and Launches
This is the time when the hydrographers and ship crew can begin “coloring in the lines” by filling in designated polygons with sonar data. The hydrographers are in charge of determining where the ship or launch needs to be driven in order to gather the required data using navigation software on the ship called HYPACK. They are also responsible for taking Conductivity Temperature Depth (CTD) measurements in order to apply accurate sound speed profiles to the data. The deck department and the NOAA Corps officers are responsible for following the plan laid out by the hydrographers in order to navigate the ship to gather data. This takes attention to detail, because if the ship goes off course, data is missed for a certain area creating a “holiday”, or a gap in the data. If a holiday is created it means that the crew has to go back and get the missing data later. Nobody likes a holiday as it costs time and money to fix. While data is being collected, the hydrographers are in charge of keeping an acquisition log that is a detailed record of everything that is taking place during a specific survey. The team uses a program called Seafloor Information Systems (SIS) in order to collect the sonar data on the ship. On the launches, HYPACK serves a dual function as the navigation software and the sonar software.
Randy (left) and Brandy (right) working on ship survey by monitoring the systems, drawing lines for navigation, and ensuring that good data is being collected.Left – Releasing the CTD from one of the launches. Right – Controlling the CTD as it is dropped from the surface to the bottom.
Step Five: Processing and Cleaning the Data
This was one of the most interesting parts of the process as you begin to see the data come to life. The “lines” of data that are collected using the Konsberg sonar unit are brought over to a program called CARIS. Certain correctors such as sound velocity and the predicted tides are added to the data in CARIS as well. While each processing step is being completed, the hydrographer is responsible for making notes in the acquisition log.
Here is an example of some lines of data that have been added into the processing software.
Next it is important to “clean” the data. This is done by moving carefully over each line of data to filter out any noise that shouldn’t be there. When the data has been cleaned it can then be added to the project file for the sheet manager. This way the hydrographer that is in charge of that specific sheet of data can see what progress has been made and what steps are still required for the work to be completed.
Here is an example of data that needs to be cleaned. Notice how the data jumps around rather than showing one continuous ocean floor.
Step Six: Writing the Descriptive Report (DR) and Conducting a Survey Review
The Descriptive Report (DR) seems to be the most tedious part of the process. This is the report that is included with the sheet when it is sent to the Pacific Hydrographic Branch for review and further processing. It thoroughly explains things like the area surveyed, how data was acquired, and results and recommendations. After a DR is thought to be complete, the ship conducts an internal review. This is what I got to sit in on during my last day on the ship. After it has met the expectations of the Chief Survey Technician, the FOO, and the CO, the project can then be sent off the ship to the Pacific Hydrographic Branch before being sent on to the Marine Chart Division (MCD) where the charts are finalized.
This is an image of all of the work that has been completed in the Shumagin Islands by the Rainier during this field season. The colored sections have been completed, and you can see the polygons that need to be finished.
Like I said in my previous blog post, the scientific process is not easy. These scientists and crew work tirelessly to ensure that they are producing quality work that can be utilized for safe navigation. I appreciate their efforts, and I want to thank them for their long hours and their attention to detail.
Personal Log
I find myself unable to fully express my gratitude to the crew of the Rainier for my time with them. They allowed me to ask endless questions, they welcomed me into their close-knit community, and they provided me with an experience of a lifetime. I am extremely thankful for this opportunity, and I wanted to be sure to offer my appreciation.
It has been over a week since I’ve been back in Newport, Oregon, and I’ve had a great time reliving my Teacher at Sea (TAS) experience with family, friends, coworkers, and students. While we were transiting from the Shumigans, Christie Reiser, a Hydrographic Assistant Survey Technician on board gave me an awesome video that she had made with several crew members. The video gives a tour of the Rainier, and I thought it would be a nice to share it on my blog as a way to show people where I spent my 18 days at sea.
In this section I usually do a detailed interview with one crew member. As this is my last blog post, I wanted to be sure to include all of the other interviews that I had while on the ship. For each of these interviews I have included a snapshot of the conversation that I had with each person. While I wasn’t able to interview everyone on board, I can say for a fact that each person I met had a unique story. I was particularly fascinated by the various pathways that people have taken in order to become part of the Rainier crew. Enjoy!
Did You Know…
The NOAA Teacher at Sea community has created a Did You Know website. Click on the following link to check out an assortment of things you might not have known: http://teacheratsea.noaa.gov/dyk/#box23_text
Farewell
Thank you for following my blog and for sharing this experience with me. Thanks again to the crew of the Rainier for giving me this once in a lifetime opportunity. I’ve learned so much from this experience, and I plan to take the knowledge I’ve gained and pass it along to my students, friends, and community members.
The crew signed this flag and gave it to me as a departing gift.
Best wishes to the crew of the Rainier, good luck with the rest of your field season, and happy hydro!
nning past our playground toward the Pacific Ocean. South Prairie School boasts 360 entertaining, amazing second and third grade students and a great cadre of teachers who find ways to integrate science across the curriculum. We have a science, technology, engineering and math (STEM) grant that allowed me to meet Teacher at Sea alumni, Katie Sard, who spoke about her adventures aboard NOAA Ship Rainier. I dreamed about doing something similar, applied, and got accepted into the program and am even on the same ship she was!
