Steven Wilkie: July 3, 2011

NOAA TEACHER AT SEA
STEVEN WILKIE
ONBOARD NOAA SHIP OREGON II
JUNE 23 — JULY 4, 2011

Mission: Summer Groundfish Survey Geographic Location: Northern Gulf of Mexico Date: July 3, 2011 Ship Data

Latitude 29.27
Longitude -94.39
Speed 9.30 kts
Course 298.00
Wind Speed 6.70 kts
Wind Dir. 281.88 º
Surf. Water Temp. 29.90 ºC
Surf. Water Sal. 24.88 PSU
Air Temperature 29.30 ºC
Relative Humidity 75.00 %
Barometric Pres. 1015.75 mb
Water Depth 15.70 m

Science and Technology Log

One of the first expeditions devoted to the study of the world’s oceans was that of the H.M.S. Challenger.  This voyage covered a distance of more than 68,000 nautical miles.   Although other expeditions prior to the Challenger expedition would periodically collect data about the ocean environment, none were devoted solely to the exploration of the chemical, biological and physical attributes of the oceans.

The Voyage of the HMS Challenger
The HMS Challenger’s voyage spanned 4 years and covered close to 70,000 nautical miles.
A sounding device used by the Challenger expedition. This weighted line would be lowered over the side of the ship and the amount of line let out would indicate depth.

If you have read my previous posts, you know how important monitoring the abiotic factors are.  This was no different aboard the Challenger expedition.

And remember it took 23 years to process and publish all of the data, well with the help of computers and the internet, the Oregon II’s data is available in hours.

Michael Hendon (lead scientist) performs a winkler titration to determine dissolved oxygen content. See wet chemistry skills are still important!
Michael Hendon (lead scientist) performs a winkler titration to determine dissolved oxygen content. See wet chemistry skills are still important!

Although technology plays a pivotal role in collecting and analyzing the data, computers still need to be cross referenced against tried and true scientific processes.  In order to ensure that all of the CTD equipment is accurate, random water samples are pulled using the CTD’s sample bottles.  A chemical titration, known as the Winkler titration is used to determine the amount of dissolved oxygen present in the water samples.

The method for sampling the living organisms along the bottom of the seafloor has not changed much since the Challenger expedition.  Trawl nets are still the name of the game, although the way they are deployed might vary a bit!

Mike and Cliff bring the Oregon II's trawl aboard complete with catch.

Once the catch is on board, the process begins to collect data (remember that is why NOAA is out here) to better understand how populations are changing in order to set catch limits and analyze human impact.  In the day’s of the Challenger expedition, the work of analyzing samples and collecting their would have been done in a lab aboard ship, and we rely on similar if not more automated facilities onboard the Oregon II.  Follow this link to take a virtual tour of the Challenger’s “Wet lab”. The wetlab onboard the Oregon II is where I spend the majority of my 12 hour watch.   It is here that the catch is brought after we bring it on deck, we sort the catch, count and measure a subsample of what is brought on board.  If we had to measure everything that came up with the net we would never get finished.  By taking a subsample we can split the catch into percentages depending on the weight of the entire catch and count a smaller sample of the catch.  This subsample’s diversity can then be used as a basis for the entire catch.  This saves time and effort on our part and still provides an accurate representation of what was in the net.  A few species are selected to be counted in their entirety, that includes all commercially important shrimp (brown shrimp, pink shrimp and white shrimp) and all red snapper.  We will also pull organisms into our subsample that are unique to the catch such as sharks, rays, skates etc.

Now I am not quite sure how the Challenger expedition determined where it would sample and when, perhaps if they saw something interesting they would simply drop their nets in the water, but with the Oregon II, the sampling sites are predetermined and the method to set up those sites is quite sophisticated.  In order to ensure that the cruise covers the majority of the Gulf of Mexico NOAA uses a method known as independent random sampling.  This method uses a computer program to randomly select stations based on depth data, and spatial area.  By choosing random samples independently, the scientists can rest assured that they haven’t purposefully singled out an area with “good fishing” or “bad fishing” and that the data they collect will represent a more accurate count of the actual fish populations in the Gulf of Mexico.

Steven Wilkie: June 30, 2011

NOAA TEACHER AT SEA
STEVEN WILKIE
ONBOARD NOAA SHIP OREGON II
JUNE 23 — JULY 4, 2011

Mission: Summer Groundfish Survey
Geographic Location: Northern Gulf of Mexico
Date: June 30th, 2011

Ships Data

Latitude 28.32
Longitude -95.19
Speed 9.10 kts
Course 273.00
Wind Speed 12.71 kts
Wind Dir. 79.58 º
Surf. Water Temp. 28.20 ºC
Surf. Water Sal. 24.88 PSU
Air Temperature 29.50 ºC
Relative Humidity 75.00 %
Barometric Pres. 1014.84 mb
Water Depth 35.70 m

Science and Technology Log

So despite the long shifts, I managed to rouse myself out of bed early for my shift.  I wandered up to the drylab (just off of the deck) to check in and see what had been brought on board during the last trawl.  The second watch was working up a catch in the wet lab and on the deck was an unusual but significant catch, a sea turtle.  Definitely not a targeted species of

An unintended catch, the Kemp's Ridley (Lepidochelys kempi) was brought on board with one of the trawls, but returned to the sea safe and sound.

this cruise.   Although rare on NOAA cruises, sea turtles are unfortunately often caught up as bycatch by the fishing industry.  Bycatch is an unintended species in the net, and sea turtles were a  large bycatch component of the shrimp industry.

NOAA takes sea turtle bycatch very seriously.  No sooner had the turtle been put on the deck did the science team spring into action to collect vital statistics and data about the turtle before returning it back to the Gulf safe and sound.   The Kemp’s Ridley sea turtle (Lepidochelys kempi), like most sea turtles, is considered and endangered species.   By collecting data about the sea turtles, NOAA scientists can continue to monitor the health of the population, especially in light of last  year’s Deep Water Horizon oil spill.

Scientists worked the turtle up by collecting measurements (length and width) of the shell, and collecting a tissue sample in order to perform DNA analysis.  An electronic tag was inserted under the skin, so that if the turtle is caught again  it can be scanned and more data can be added to its file. This would allow scientists to determine migratory patterns and growth rates.  Finally the turtle’s rear flippers were fitted with tags that, again, would allow scientists to monitor its movement, age and growth.

Trained NOAA scientists measure the carapace length of our unexpected catch.Before being returned to the Gulf, the Kemp's Ridley is outfitted with two flipper tags. These tags can be used to help scientists monitor the life history of this particular turtle.
Trained NOAA scientists fit the Kemp's Ridley sea turtle with tags that can be used to collect additional data should the turtle be caught again.
In the early 1980s the situation with turtle populations in the Atlantic and Gulf of Mexico waters had gotten so dire, that scientists began researching ways to reduce turtle bycatch.  TEDs or Turtle Exclusion Devices were introduced to the shrimping industry on a volunteer basis.  These devices are rigged to the catch-end of shrimpers’ nets and act like a grate over a storm drain.  The water (and shrimp) can flow into the end of the net, but anything as big as a turtle is stopped and able to escape through a trap door.  To get a better idea of how a TED works follow this link to NOAA’s video of a TED in action.
  Today, TEDs are mandated on all trawl nets used by the fishing industry.  Although at first the shrimping industry was reluctant to embrace the technology, by working collaboratively, scientists, the fishing industry, and government legislators are helping to  curtail the drastic reduction in sea turtle populations in American waters.

Heather Haberman: Introduction July 1, 2011

NOAA Teacher at Sea
Heather Haberman

Onboard NOAA Ship Oregon II
July 5 — 17, 2011 


Mission: Groundfish Survey
Geographical Location: Northern Gulf of Mexico
Date: Friday, July 1, 2011

Heather Haberman
Heather Haberman, Science Teacher at Scottsbluff High School in Nebraska

Pre-cruise Personal Log: 

Allow me to introduce myself.

My name is Heather Haberman and I have been a science teacher at Scottsbluff High School in Western Nebraska for the past six years.  I LOVE being a teacher and sharing my passion for science with others.  Everyday brings a new adventure and there is rarely a dull moment.

Zoology and Environmental Science have always been my primary interests which motivated me to obtain a degree in Biology.  This degree allowed me to pursue positions such as a Research Assistant with the US Fish and Wildlife Service, an Animal Caretaker with the US Department of Agriculture, a Forest Protection Officer with the US Forest Service, as well as a Zookeeper and Education Curator for Riverside Zoo.  As an Education Curator, I realized how much fun it was to teach science so I decided to go back to college and earn my Education degree.  These real world experiences have helped me make science more fun and applicable to the lives of my students.  This is one of the reasons why I am so excited about being selected to participate in the NOAA Teacher at Sea program.

Oregon II
NOAA's research vessel the Oregon II

The National Oceanic and Atmospheric Administration (NOAA) is a federal agency focused on the condition of the oceans and the atmosphere.  Next week I will begin working alongside NOAA scientists on a groundfish survey in the Gulf of Mexico aboard the Oregon II.  Their primary summer objective is to determine the abundance and distribution of shrimp by depth. Other objectives include obtaining samples of commercially important fishes, such as red snapper, and crustaceans.  This data enables scientists to predict population trends which allows government officials to regulate the fishing industry in a more sustainable fashion.  It is also important to collect weather (meteorological) data and physical ocean (hydrographic) data to look for climatic trends and to assess the health of the ocean.  Plankton samples will also be collected since they play a key role in the oceanic food web and are good indicators of ecosystem change.

The Mississippi watershed drains approximately 40% of the Unites States, including Nebraska.

I am excited to be a part of this scientific research team collecting data about the health of our fisheries and oceans.  I hope that bringing back real scientific stories about research at sea will help my students from the Great Plains feel more of a connection to their watershed and the oceans of our planet.  Being over a thousand miles away from an ocean makes it easy to dismiss the fact we rely on the sea for so many of our resources, and how our actions impact the marine environment.

I will be posting updates on this blog three to four times a week.  I would like to answer as many of your questions as possible while on my mission. What would you like this sea-faring teacher to inform you about? Would you like to know about the ship; the jobs of my co-workers; marine life; ocean chemistry; my duties aboard the ship; science at sea; etc?  Leave me a message by scrolling to the bottom of the blog post and select “Leave a Comment”.  I can’t wait to hear from you.

Mechelle Shoemake, June 27, 2010

NOAA Teacher at Sea
Mechelle Shoemake
Onboard NOAA Ship Oregon II
June 19 – 30, 2010

Mission:  SEAMAP Groundfish Survey
Geographical Area of Cruise:  Northwestern Gulf of Mexico
Date:  Sunday, June 27, 2010

Weather Data from the Bridge
Time: 0700 hours (07:00am)
Position: Latitude = 28.80.02 N; Longitude = 090.20.40 W
Present Weather: partly cloudy
Visibility: 8 nautical miles
Wind Speed: 8 knots
Wave Height:  3 foot swells
Sea Water Temp:  29.8 degrees Celsius
Air Temperature: Dry bulb = 27.9 degrees Celsius; Wet bulb = 25.5 degrees Celsius

Here I am measuring and weighing the fish.

Science and Technology Log
We are on twelve hour shifts while on the Oregon II. That means that we have two crews of scientists that work around the clock taking fish, plankton, and water samples.  My shift begins at 12:00 noon and ends at midnight.  Our first shift began on Sunday. We had finally reached our first station for study, so we took over for the first set of scientists.  They had just finished a trawl and had separated the fish.

Here I am measuring and weighing the fish

We finished weighing and measuring the fish. Next on the agenda was a fire and abandon ship drill.  We had to “muster” to our stations for a head count  during the fire drill.  Next, the alarm sounded for the abandon ship drill.  We all had to get our survival suits and meet on the top deck.

As soon as the drill was over, we were able to get back to work. we first did a CTD test, which stands for conductivity, temperature, and density. This fancy machine tests these variables of ocean water at different depths. We took water samples from the bottom of the ocean, in the middle, and on the surface of the water column.  This is a very important sampling because it will help to determine if the shrimping and fishing waters can be opened back up since the Deepwater Horizon/BP oil spill.

During the safety drill, I donned my survival aute, also called a Gumby suit!
I’m assisting in getting the CTD ready for deployment

We then had to take a plankton samples. This is done buy using a plankton net called a Neuston net. it is very fine woven net that catches all of the small fish and other animals that we label as plankton. This was amazing to see. The net caught “floating nursery,” a plant called  sargassum. Many fish lay their eggs in this floating grass. Sea turtles also use it as a resting ground. We gathered all the plankton and preserved it for further testing. Sad to say, we also picked up some tarballs in our plankton net. This is not a good sign.

We soon did a trawl with the shrimping nets. This was very interesting to see what we caught. You never know what you might catch when you drag the ocean floor with a net. I never realized how many different species of fish there are. We caught some very nice sized brown shrimp. We had to count, weigh, and preserve all the fish and other critters.

This is a close up of the Neuston net.
I’m helping sort the catch. Those are squid I’m holding up.

Personal Log

I really admire the NOAA employees. They all work very hard for us. Our ship is performing a very important job by determining whether areas of the Gulf will be safe for fishing again. These men and women are gone from their families for extended periods of time and stay at sea for long voyages. I am enjoying my stay on the Oregon II, but I have to admit that I am still trying to grow my “sea legs”.

Mechelle Shoemake, June 23, 2010

NOAA Teacher at Sea
Mechelle Shoemake
Onboard NOAA Ship Oregon II
June 19 – 30, 2010

Mission:  SEAMAP Groundfish Survey
Geographical Area of Cruise:  Northwestern Gulf of Mexico
Date:  Friday, June 25, 2010

Weather Data from the Bridge
Time: 1300 hours (1:00pm)
Position: Latitude = 30.22.02 N; Longitude = 088.33.80 W
Present Weather: partly cloudy
Visibility: 8-10 nautical miles
Wind Speed: 6 knots
Wave Height: 1-2 feet
Sea Water Temp:  30.9 degrees Celsius
Air Temperature: Dry bulb = 32.7 degrees Celsius; Wet bulb = 23.2 degrees Celsius

Science and Technology Log
Hello everyone!  I am Mechelle Shoemake from Laurel, MS.  I am a teacher at South Jones Elementary school.  I was chosen by NOAA to participate in their TAS (Teacher at Sea) program.  I was chosen to sail aboard NOAA Ship Oregon II.

Here I am aboard the Oregon II, ready to sail!

The Oregon II conducts a groundfish cruise in the summer and fall across the northern Gulf of Mexico from Alabama to the Mexican Border in depths between 5 and 60 fathoms.  The Oregon II conducts strong bottom trawling.  This is a type of fishing where you drag a net along the sea floor.  The primary sampling objective in the summer is to determine the abundance and distribution of shrimp by depth.  Since shrimp are animals that live near the sea floor, bottom trawling is the best way to catch them.  Due to the recent Deepwater Horizon/BP oil spill, we will be gathering samples of oiled shrimp and fish for further testing to be done.

We will be studying three types of shrimp:  white, pink and brown shrimp.   For more information about these shrimp, go to http://www.dnr.sc.gov.  This website explains how to identify the different species.

The bow (front) of the Oregon II, as she sits tied to the dock in Pascagoula.

We have had a slow start on the Oregon II due to repairs being made to the vessel that were necessary to keep  her in service for the next 6-8 years.  Our date of departure changed many times. We finally set sail on Wednesday, June 23, 2010.  Before we reached our destination, we started having some small problems with the vessel.  We turned around and we are now sailing back home to Pascagoula so repairs can be made.   Although we had to come back to port, we did sail for many hours.  During that time I had a lesson in line tying.  Line is the word used for rope when you’re on a ship.  This is task that many skilled and experienced sailors learn.  Believe me, it is harder than it looks.

Learning to tie line knots is harder than it looks!

I also had a lesson on how to read nautical charts and how to chart the longitude and latitude of a certain point. My first morning on the ship was breathtaking. The sunrise was beautiful, as you can see in the picture below.   Personal Log My first few hours at sea were not the greatest in the world.  I came prepared for sea sickness…maybe a little TOO prepared.  I was beginning to wonder if I would make it on the Oregon II.  But, thanks to Lindsey, our XO, she suggested that I remove my “sea patch” from behind my ear.  Wow, what a miracle!  I was no longer sick!  Lesson to the wise:  don’t overdose with the medicine.  Question of the Day How many feet are in a fathom?

Animals Seen Today: Dolphins, Pelicans

Sunrise over the Gulf of Mexico