Tonya Prentice: Time for Bongos, August 15, 2024

NOAA Teacher at Sea

Tonya Prentice

Aboard NOAA Ship Henry B. Bigelow

August 8 – August 24, 2024

Mission: Northeast Ecosystem Monitoring Survey 

Geographic Area of Cruise: Northwest Atlantic Ocean

Date: August 15, 2024

Weather Data from the Bridge
Latitude: 42.26980º  N   
Longitude: 66.08756º W
Wind Speed: 11 mph due N
Air Temperature: 15.4° Celsius (59.7° F)
Sea Temperature: 18.2 Celsius (64.8° F)


Science and Technology Log

Behind the Scenes: Collecting Plankton Samples on Our Mission
During this mission, we will be collecting plankton samples from over 120 stations in the Gulf of Maine and further south along the East Coast (see the figure below; Summer ECOMON Track Lines).

a political map of the waters of the northeastern shelf, focused on Newport, RI, extending as far north as Southern Maine and as far south as eastern New Jersey. a bright green icon approximately the shape of a vessel sits on Newport, surrounded by radial lines marking every 30 degrees. large blue dots throughout the coastal waters mark sampling stations. They are connected by straight black line segments showing the track of the survey. there are also some smaller black dots connected by bright green line segments. extra labels mark Georges Bank (east of Cape Cod), Maine, and Mount Desert Island.
Summer EcoMon Track Lines

But why focus on plankton? Plankton are the foundation of all oceanic food webs, crucial for the survival of larger fish, marine mammals, and birds. Any changes in plankton biomass can have ripple effects throughout the entire ocean ecosystem, impacting a wide range of species.

By studying plankton, we gain insights into the health of our oceans. The data collected from these samples will be invaluable in estimating the populations of certain fish species and identifying key spawning areas. Moreover, we can observe how fish populations are shifting or altering their habitats in response to environmental changes and other stressors. (NOAA Fisheries)

Collecting plankton samples during this mission is a collaborative effort, requiring the expertise of the NOAA Corp, engineers, deckhands, survey technicians, and scientists. Together, we work to deploy, retrieve, and prepare the plankton samples for research.

We use two types of Bongo nets for sampling: Baby Bongos, set in a 20 cm frame, and Big Bongos, set in a 60 cm frame. Each net has a specific purpose: one is labeled “I” for Ichthyoplankton and the other “Z” for Zooplankton. These nets, made from 333 µm mesh, are equipped with flow meters to measure the volume of water filtered during each tow.

Once the Bongo nets are lowered into the water, the Conductivity, Temperature, Depth (CTD) sensors immediately start gathering conductivity, temperature, and depth data. The nets are then lowered to about 10 meters above the sea floor and gradually pulled back to the surface. Care is taken to ensure the nets don’t touch the ocean floor, avoiding the need for a recast. Today, for instance, we collected samples from around 230 meters deep!

When the Bongo nets are retrieved, we promptly rinse down the nets to flush the plankton into the codends at the bottom of the nets. The nets are then untied, and the plankton are flushed into a sieve pan.

Next, we carefully rinse the plankton from the sieve into a glass jar, preserving the sample by adding 5% Formalin. The jar is then topped off with seawater, labeled with the station/event, and inverted several times to ensure the sample is well-mixed. On average, we collect about 32 jars of plankton per day.

Finally, the plankton are ready to be shipped off to a lab to be sorted and counted.

Steps for collecting plankton:

Personal Log

Life Aboard the NOAA Ship Henry B. Bigelow: A 24/7 Operation

The NOAA Ship Henry B. Bigelow never sleeps, which means someone is always awake and hard at work. This is no cruise ship—everyone aboard the NOAA Ship Henry B. Bigelow has a vital role to play. Most crew members work 12-hour shifts, ensuring the ship’s operations continue smoothly around the clock. In addition, all the department crew are responsible for safety drills, and are trained in firefighting and lifesaving equipment.

As part of the science crew, I work from 3 am to 3 pm, while my roommate takes over from 3 pm to 3 am. Our team of scientists are constantly collecting and uploading data to support our mission. Engineers, deckhands, and survey technicians work shifts from 12 am to 12 pm or 12 pm to 12 am.

Engineers keeping everything running efficiently and addressing any technical issues that may arise. They are responsible for the safe and proper operation of a ship’s machinery and equipment and other mechanical and electronic equipment onboard.

Survey technicians assist in the operations, monitoring, handling, and maintenance of various scientific gear. This includes annotating records and recording data; assist in the staging and set-up during preparations for, and at the completion of oceanographic or fishery research. They also perform oceanographic or fisheries observations, measurements, and calculations, assisting in the preparations, installation, deployment and recovery of oceanographic or fishery research equipment. (NOAA Survey Department)

The Deck Department operates the cranes and winches to deploy scientific equipment, and maintain the material condition of the ship. Electronics Technicians maintain the ship’s computer network and vital emergency communication and navigation equipment.

The NOAA Commissioned Officer Corps (NOAA Corps) operate and navigate the ship, and monitor oceanographic and atmospheric conditions, ensuring our safety and guiding us through each phase of the mission.

And let’s not forget some of my favorite crew members—the stewards, who keep us well-fed with amazing meals and plenty of delicious snacks.

Given the non-stop nature of our work, it’s important to remember that someone is always sleeping. This means being mindful of your noise level: avoid slamming doors, walk quietly down the halls, and always use your “inside voice” when moving about the ship. When living and working in such close quarters, professionalism, civility, and respect are essential to maintaining a happy and welcoming work environment.

a bulletin board labeled Meet the Crew! Tacked to the board with colored push pins are printed photos of 26 people, grouped by department: NOAA Corps (8 people), Engineering Department (7 people), Electronic Tech Department (2), Survey Department (3), Deck Department (4), Steward Department (2)

Did You Know?
There are currently 42 species of dolphins and seven species of porpoises. (Whale and Dolphin Conservation). Check out these videos captured this week of both Bottlenose and Common Dolphins riding alongside the NOAA Ship Henry B. Bigelow! Can you spot the difference between Bottlenose and Common Dolphins?

Bottlenose Dolphins
Common Dolphins

Gail Tang: And We’re Off! Aug 8, 2023

NOAA Teacher at Sea

Gail Tang

Aboard NOAA Ship Oscar Elton Sette

August 4, 2023 – September 1, 2023

Mission: Hawaiian Islands Cetacean and Ecosystem Assessment Survey (HICEAS)

Geographic Area of Cruise: Hawaiian archipelago

Date: Tuesday August 8, 2023 

Weather Data from the Bridge

Temperature: 26.97°C

Latitude: 27.428517 N

Longitude: -167.325400 W

Science and Technology Log

Scientific results reach the general public as a nice package of carefully curated nuggets designed to attract the average reader. It’s not unlike watching a production (movie, play, etc) in its final form. The audience is glamoured by the show or results; we aren’t usually privy to the behind-the-scenes efforts in putting together these massive operations. With this view, there is an illusion of perfection that can hide the true nature of knowledge production. This is often the case in a traditional mathematics classroom that utilizes lecture-based teaching; the instructor works out a problem beforehand and presents the solution to the students. The students do not witness the creative process of trial and error, idea generation, incubation, evaluation of each step, decision-making, or any possible collaboration involved. In brief, the beauty of doing science or math is largely hidden for the general public. I believe that the opportunity for growth lies in the process of discovery just as much as the discovery itself. My access to the data collection process of this project is one of the main reasons I am so thoroughly enjoying myself on this HICEAS (Hawaiian Islands Cetacean Ecosystem Assessment Survey) mission. 

Today is our fifth day at sea. Every moment is invigorating. During our first two days underway, we searched for the elusive Cross Seamount beaked whales (BWC). These whales have been identified acoustically, but not visually or genetically. The acoustics team heard them throughout the night on our first night, and the visual team had a sighting of a suspicious unidentified beaked whale during the third day but we didn’t get close enough for any species or individual identification. There was a lot of excitement on the ship. To learn more about beaked whales check out my roommate and lead acoustician, Jennifer McCullough’s, newest paper: https://onlinelibrary.wiley.com/doi/full/10.1111/mms.13061 

Though I missed it, there was an important bird sighting of the Hawaiian bird, the nēnē. This is a notable sighting because it was formerly endangered (now listed as threatened). After conservation efforts, the population increased from 30 in 1950 to 3,862 in 2022. To read more about the nēnē, visit: https://www.fws.gov/story/2022-12/plight-nene 

The most exciting sightings for me were the rough-toothed dolphins and the bottlenose dolphins. They came by to ride the ship’s bow waves. It was utterly magical. In a conversation with Marine Mammal Observers Andrea Bendlin and Suzanne Yin, I learned a little bit about these two species that I’ll share here.

You might recognize the bottlenose dolphin from Flipper, a popular TV show from the 60s or the movie version in the 90s. You may have also seen these dolphins at the aquarium as they can survive in captivity better than other dolphin species. They are described as the golden retrievers of the ocean. In the wild, they are regularly observed hanging out with other species.

An interesting observation of an interaction between a mother humpback whale and a bottlenose dolphin was captured by scientists and written up in a paper. They hypothesize three reasons for this interaction 1) aggressive whale response towards the dolphin 2) epimeletic (altruistic behavior towards a sick or injured individual) whale response towards the dolphin 3) they were playing!

To read the paper check out: https://www.researchgate.net/publication/228684912_Two_Unusual_Interactions_Between_a_Bottlenose_Dolphin_Tursiops_truncatus_and_a_Humpback_Whale_Megaptera_novaeangliae_in_Hawaiian_Waters

Three bottlenose dolphins swim through bright blue water. Two have breached the water's surface, giving us a clear view of their dorsal sides. A third is visible swimming underwater, underneath the two breaching.
Bottlenose dolphins came to say hi! (Permit #25754) Photo Credit: NOAA Fisheries Gail Tang

Rough-toothed dolphins are named for their rough teeth. They have a more reptilian sloped head. These animals communicate via whistles and clicks. Echolocation clicks are primarily used for sensing surroundings and searching for prey vs. communication. According to roomie and Lead Acoustician Jennifer McCullough, usually whistles look like a smooth increasing and then decreasing function, however, their whistles look like “steps” and are named stair step whistles (see the pictures below).

A graph of frequencies (measured in kilohertz) over time (measured in seconds). It is titled: Figure 1. Spectrogram of whistles produced by Steno bredanensis (44.1 kHz sample rate, 1,024 FFT, Hann window.) The background of the graph is gray with white speckles - looks like 'fuzz' - but distinct black lines trace the stair-shaped patterns of rough toothed dolphins' whistle frequencies.
Figure from Rankin et al. (2015, p.5)

Rough-toothed dolphins can take a while to identify because their echolocation signals (clicks) are outside the general frequencies for dolphins (e.g. bottlenose, striped, spinner, spotted) and “blackfish” (e.g. killer whale, false killer whales, pygmy whales, melon-headed whales). Blackfish signals go from 15-25kHz, dolphins go from 30-50kHz, while rough-toothed dolphins bridge these two ranges at 20-35kHz. For reference, the frequency range of adult humans is 0.500 kHz and 2 kHz.

Rough-toothed dolphins playfully riding the ship’s bow waves. Permit #25754.

Reference:

Rankin, S., Oswald, J., Simonis, A., & Barlow, J. (2015) Vocalizations of the rough-toothed dolphin, Steno bredanensis, in the Pacific Ocean. Marine Mammal Science. 31 (4), p. 1538-1648. https://doi.org/10.1111/mms.12226

Career Highlights

As I mentioned earlier, the information I’m receiving about the animals are from the scientists on board. In this particular post, Marine Mammal Observers Andrea Bendlin and Suzanne Yin (who goes by Yin), and Lead Acoustician Jennifer McCullough gave me insight to the dolphins. I’d like to share some of their background to give students an idea of their career trajectories. 

Andrea Bendlin double majored in zoology and psychology at University of Wisconsin, Madison, with a focus on animal behavior. For the first 4 years after college, she worked on several different field projects including, 4 winters of humpback whale research, one summer study on bottlenose dolphins, and several summers in Quebec studying large whales. Then she started working on boats doing snorkel trips and whale watches. I can attest to Andrea’s snorkeling expertise as I had my favorite snorkeling experience in Hawaii when I was following her around. She pointed out my favorite snorkeling sighting which was an egg sack of a Spanish dancer nudibranch! As you can see in the picture below, it looks like a ribbon wound around itself. For math folks, it is a hyperbolic surface! Since then, Andrea has collected data for many cruises with cetacean research programs.

this egg sack, perched on a rock underwater, consists of elegant reddish-pink folds - from a distance it looks like a flower, like a carnation
Spanish Dancer Egg Sack. Photo Credit: Alamy Stock Photo

Yin studied biology at Brown University. After school, she worked at Earth Watch, and also did field work on humpback whales, spinner dolphins, and bowhead whales. These projects were conducted on what they call “small boats” (less than 50 ft long) as opposed to a ship like the one we’re currently on, which is is 224 ft long. On these small boats, Yin drove, took photos for species and individual identification, collected acoustic data, and used theodolites to measure angles.  Later, she attended graduate school at Texas A & M University for her Masters degree. She studied wildlife and fisheries science with a focus on acoustics of dusky dolphins and tourist impact on them.  

Gail, in front, takes a selfie with Andrea (to her right) and Yin (to her left) inside a stateroom. We can see bunk beds, luggage, a fan, metal lockers.
Andrea Bendlin, Gail Tang, Suzanne Yin in my Leg 1 stateroom

Jennifer McCullough is the Lead Acoustician on HICEAS 2023. She first started at Hubbs Sea World Research on killer whales where she learned acoustics. She participated in a joint polar bear project with the San Diego Zoo. She then completed a Master’s thesis on the giant panda breeding vocalizations through the San Diego Zoo and China Wolong Panda Reserve. She spent 6 months over 2 years in the Sichuan region. We talked about the Sichuan peppercorn for a bit since I love them so much. She prefers them whole, while I prefer them ground up. After that she worked at Southwest Fisheries Science Center in La Jolla, California and later moved to the Pacific Islands Fisheries Science Center in Honolulu, Hawaii and was the Acoustics Lead during HICEAS 2017. With the exception of a HICEAS project year, she is at sea for 30-60 days a year and the rest of the time she is ashore analyzing data from previous missions and constructing equipment for future ones! She loves the balance between the equipment work (technical side), field work (data collection), and lab work (data analysis). As a side note: she makes amazing quilts!

Jennifer holds up a quilt with both hands to show off the design: an abstract, feathery shape made from a fabric of many blue shades, sown onto a white background.
Jennifer McCullough with the quilt she just finished!

Personal Log

Life at sea reminds me a bit of my college dorming-days; you’re sharing a room and you leave your door open to invite others in! I share my room with really great roommates. Dawn Breese is a seabird observer and creates a nice vibe in the room with flowers she picked ashore and some sweet feathers taped to the wall. Alexa Gonzalez is an acoustician with whom I do crosswords and play “road-trip”-type games. Jennifer McCullough, highlighted above, is going to teach me how to watercolor!

All in all, I am fairly comfortable on the ship. I spend time bouncing between the acoustics lab, the flying bridge (where the visual team observes), the local coffeeshop—The Forward Mess—(where I do most of my work), and the grated deck, stern, and wet lab (where the plankton team works). The acousticians and visual observers work from dawn to dusk, while the plankton team works from dusk until a few hours before dawn. This means I have very long days and have succumbed to the napping culture aboard the ship!

When not checking in on the scientists, I have been spending my free time getting know the people on board, learning knots, riding the stationary bike on the boat deck, and attempting pull ups. It’s a wonderful life!

Oh and please enjoy this photo of me in my “gumby” suit (a protective suit in case of abandon ship).

Gail in a red survival suit, thumbs up. She's in an interior room of the ship.
Gail Tang in gumby suit. Photo Credit: Suzanne Yin.

Food Log

To be honest, due to limited physical activity on board, I stopped eating breakfast or even going down to the mess at that time because I have no self-control when it comes to food! The oxtail udon is the highlight so far. It was incredible! Third assistant engineer, Jason Dlugos, requested it and even brought his own rice cooker with his own rice down to dinner.

Jamie and Jason sit at a table. Jamie rests her chin on crossed arms above empty plates. Jason sips from a travel cup in his left hand, and with his right, holds a spoon over his bowl of udon and rice. The rice cooker is on the table in front of him.
Jamie Delgado (Medical Officer), Jason Dlugos (3rd Assistant Engineer) and his personal rice cooker.

Catch of the Day!

Ichthyoplankton researchers Jessie Perelman and Andrea Schmidt caught two squaretail fish (Tetragonuridae), one live fish and one in its larval stage. Not much is known about this fish. One thing we do know is that these fish live inside (!) the body of an invertebrate called salp. Below is a picture of some fish living in a salp.

three small, likely juvenile, fish swim inside a gelatinous blog called a salp. the fish in front is rounder, while the two fish flanking it are narrower.
Fish inside salp. Photo credit: Rich Carey/Shutterstock.com

David Madden: Engines, Dolphins, and Sharksuckers, July 24, 2019

NOAA Teacher at Sea

David Madden

Aboard NOAA Ship Pisces

July 15-29, 2019


Mission: South East Fishery-Independent Survey (SEFIS)

Geographic Area of Cruise: Atlantic Ocean, SE US continental shelf ranging from Cape Hatteras, NC (35°30’ N, 75°19’W) to St. Lucie Inlet, FL (27°00’N, 75°59’W)

On board off the coast of South Carolina – about 50 miles east of Charleston (32°50’ N, 78°55’ W) – after a slight change of plans last night due to the approaching tropical depression.

Date: July 24, 2019

Weather Data from the Bridge:
Latitude: 32°50’ N
Longitude: 78°55’ W
Wave Height: 3-4 feet
Wind Speed: 15 knots
Wind Direction: Out of the North
Visibility: 10 nm
Air Temperature: 24.6°C 
Barometric Pressure: 1011.8 mb
Sky: Cloudy

Sunset over the Atlantic Ocean
Sunset over the Atlantic Ocean
NOAA Pisces Full Track 7-20-19
This is a map from the other day outlining the path of the ship. The convoluted pattern is the product of dropping off and picking up 24 (6 x 4) fish traps per day, along with the challenges of navigating a 209 foot ship in concert with gulf stream currents and winds.



Science and Technology Log

Life and science continue aboard NOAA Ship Pisces.  It seems like the crew and engineers and scientists are in the groove.  I am now used to life at sea and the cycles and oddities it entails.  Today we had our first rain along with thunderstorms in the distance.  For a while we seemed to float in between four storms, one on the east, west, north, and south – rain and lightning in each direction, yet we remained dry.  This good thing did indeed come to an end as the distant curtains of rain closed in around us.  The storm didn’t last long, and soon gathering the fish traps resumed. 

Dave with red grouper
Processing fish: measuring length and weight of a red grouper, Epinephelus morio.
Fish Count for July 23, 2019
Yesterday’s fish count. Compare to other day’s catches: Tons of vermillion snapper, tomtate, and black sea bass. And one shark sucker (read on for more). Thank you, Zeb, for tallying them up for me. 


The highlight of yesterday (and tied for 1st place in “cool things so far”) was a tour of the engine room lead by First Assistant Engineer, Steve Clement.  This tour was amazing and mind-blowing.  We descended into the bowels of the ship to explore the engine rooms and its inner workings.  I think it rivals the Large Hadron Collider in complexity. 

I kept thinking, if Steve left me down here I would surely get lost and never be found.  Steve’s knowledge is uncanny – it reminded me of the study where the brains of London cab drivers were scanned and shown to have increased the size of their hippocampus.  (An increase to their memory center apparently allows them to better deal with the complexities of London’s tangled streets.)  And you’re probably thinking, well, running a massive ship with all its pipes and wires and hatches and inter-related, hopefully-always-functioning, machinery is even harder.  And you’re probably right!  This is why I was so astounded by Steve’s knowledge and command of this ship.  The tour was close-quartered, exceptionally loud, and very hot.  Steve stopped at times to give us an explanation of the part or area we were in; four diesel engines that power electric generators that in turn power the propeller and the entire ship.  The propeller shaft alone is probably 18 inches in diameter and can spin up to 130 rpm. (I think most of the time two engines is enough juice for the operation).  Within the maze of complexity below ship is a smooth running operation that allows the crew, scientists, and NOAA Corps officers to conduct their work in a most efficient manner. 

Dave and Steve and engines
First Assistant Engineer Steve Clement and TAS Dave Madden in the Engine Room

I know you’ve all been wondering about units in the marine world.  Turns out, students, units are your friend even out here on the high seas!  Here’s proof from the bridge, where you can find two or three posted unit conversion sheets.  Makes me happy.  So if you think that you can forget conversions and dimensional analysis after you’re finished with high school, guess again!

conversions
Posted unit conversion sheets

Speaking of conversions, let’s talk about knots.  Most likely the least-understood-most-commonly-used unit on earth.  And why is that?  I have no idea, but believe me, if I were world president, my first official action would be to move everyone and everything to the Metric System (SI). Immediately. Moving on. 

Back to knots, a unit used by folks in water and air.  A knot is a unit of speed defined as 1 nautical mile/hour.  So basically the same exact thing as mph or km/hr, except using an ever-so-slightly-different distance – nautical miles.  Nautical miles make sense, at least in their origin – the distance of one minute of longitude on a map (the distance between two latitude lines, also 1/60 of a degree).  This works well, seeing as the horizontal lines (latitude) are mostly the same distance apart.  I say mostly because it turns out the earth is not a perfect sphere and therefore not all lines are equidistant.  And you can’t use the distance between longitude lines because they are widest at the equator and taper to a point at the north and south pole.  One nautical mile = 1852 meters.  This is equal to 1.15 miles and therefore one knot = 1.15 miles/hour. 

This next part could double as a neato fact: the reason why this unit is called a “knot” is indeed fascinating.  Old-time mariners and sailors used to measure their speed by dropping a big old piece of wood off the back of the boat.  This wood was attached to some rope with knots in it, and the rope was spun around a big spool.  Once in the water the wood would act kind of like a water parachute, holding position while the rope was let out.  The measuring person could then count how many evenly spaced knots passed by in a given amount of time, thus calculating the vessel’s speed. 



Personal Log

The scientists on board have been incredibly helpful and patient.  Zeb is in charge of the cruise and this leg of the SEFIS expedition.  Brad, who handles the gear (see morning crew last post), is the fishiest guy I’ve ever met.  He seriously knows everything about fish!  Identification, behavior, habitats, and most importantly, how extract their otoliths.  He’s taught me a ton about the process and processing.  Both Zeb and Brad have spent a ton of time patiently and thoroughly answering my questions about fish, evolution, ecology, you name it.  Additionally, NOAA scientist Todd, who seeks to be heroic in all pictures (also a morning crew guy), is the expert on fish ecology.  He has been exceptionally patient and kind and helpful. 

The fish we’re primarily working with are in the perches: Perciformes.  These fish include most of your classic-looking fish.  Zeb says, “your fish-looking fish.”  Gotcha!  This includes pretty much all the fish we’re catching except sharks, eels, and other rare fish. 

For more on fish evolution here are two resources I use in class.  Fish knowledge and evolution: from Berkeley, A Fisheye View of the Tree of Life.

Fish Tree of Life Berkeley
Fish Tree of Life, from University of California-Berkeley

And check out Neil Shuban’s Your Inner Fish series.


General Updates:

  1. Plenty of exciting animals lately.  Here’s a picture of those spotted dolphins from the other day.
  2. The weather has been great, apart from yesterday’s storm.  Sunrises and sunsets have been glorious and the stars have been abundant. 
  3. We found a common octopus in the fish trap the other day.  The photo is from crew member Nick Tirikos.      
  4. I’m missing home and family. I can’t wait to see my wife and son. 
  5. That tropical depression fizzed out, thankfully. 
spotted dolphins
Spotted Dolphins
common octopus
Common Octopus (Photo by crewmember Nick Tirikos)


Neato Facts =

Yesterday we caught a shark sucker in the fish trap.  I was excited to see and feel their dorsal attachment sucker on top of their head. 

Hold on.  I just read more about these guys and turns out that sucking disc is their highly modified dorsal fin!  That is the most neato fact so far.  What better way to experience the power of this evolutionarily distinct fish than to stick it to your arm?!  The attachment mechanism felt like a rubber car tire that moved and sealed against my skin. (Brad calls them sneakerheads).

Shark sucker
Shark Sucker on Dave’s Arm

Consider all the possible biomimicry innovations for the shark sucker’s ability to clasp onto sharks and fish and turtles while underwater.  This grasp and release adaptation surely has many cool possible applications.  Here are a few: Inspiring New Adhesives.  Robotic Sticky Tech.   Shark Sucker biomimicry

I’d love to hear your questions and comments!

Karah Nazor: The Glowing Dolphins of the Channel Islands and Interview with UCSC Graduate Student Ilysa “Ily” Iglesias, May 31, 2019

NOAA Teacher at Sea

Karah Nazor

Aboard NOAA Ship Reuben Lasker

May 29 – June 7, 2019


Mission: Rockfish Recruitment & Ecosystem Assessment

Geographic Area: Central California Coast

Date: May 31, 2019

Game Plan and Trawling Line: Channel Islands San Nicolas Line

I am up on the flying bridge and I just saw two humpback whales spouting, an albatross soaring and a large Mola Mola on the sea surface.  In this blog I will write about an amazing once in a lifetime experience that from last night- May 31, 2019. The first haul was called off due to an abundance of Pacific White-Sided Dolphins, Lagenorhynchus obliquidens, (as reported by the inside marine mammal watch prior to net deployment), so we motored on ahead to the second station, but dolphins chased the ship all the way there, too.  One strategy to encourage marine mammals to leave is for the ship to stop moving with the hope that the dolphins become disinterested and vacate the area. This pod was intent on having a party at the ship so Keith Sakuma encouraged everyone to just go outside to observe and enjoy the dolphins! 

Fishing on this survey takes place at nighttime (so the fish do not see the net) and Scripps graduate student Kaila Pearson and I stepped outside on the side deck into the darkest of dark nights. Kaila and I carefully placed one foot in front of the other because we couldn’t see our feet and where to step next. I was afraid I would trip. When I asked Keith Hanson if we should use a flashlight to safely make our way up to the top deck, he suggested that we stay in place for a few minutes to allow our eyes to adjust. Within 5 minutes or so objects around us started to present themselves to us within the black void.  We could eventually see our feet, each others faces, the dolphins, and even the finer features of the sea surface.

Within a few minutes Ily Iglesias reported seeing bioluminescence, a type of chemiluminescence that occurs in living things, such as the familiar green glow of lightening bugs in the Summer in the South.   This glow results from oxidation of the protein luciferin (present in photophore cells/organs) by the enzyme luciferase.  It its excited state, lucifern emits light.  This reaction is known to occur in some marine bacteria, dinoflagellates (single celled photosynthetic organisms), squid, deep sea fish, pyrosomes and jellyfish, and I am fortunate to have observed many of these creatures already on this research cruise (see photos below).  Some animals have photophore organs and generate their own luciferin, while others are hosts to bioluminescent bacteria.

deepsea longfin dragonfish
The large photo organ is a large green circle under the eye of the deepsea longfin dragonfish, Tactostoma macropus.
California lanternfish
California lanternfish, Symbolophorus californiensis, with photophores under the lateral line and the ventral surface.
California lanternfish photophores
California lanternfish photophores
Blue lanternfish
Blue lanternfish, Tarletonbeania crenularis, collected from a bongo net at 265 meters. Photophores line the ventral surface of the body.
Cranchia scabra
Cranchia scabra “baseball squid” with large photophores lining the eyes.
Chiroteuthis veranii squid
Chiroteuthis veranii squid

When dinoflagellates floating on the sea surface are agitated, they glow.  At first when I was trying really hard to see this, I noticed a couple of tiny flashes of green light, sort of like lightening bugs, but it wasn’t anything super obvious. In time, I noticed clouds of faint light, sort of like a glowing mist floating the water’s surface, that moved up and down with the swell.  I hypothesized that dinoflagellates on the sea surface were being agitated by the passage of waves through them and Ily suggested that it was caused by schools of anchovies.

Since the dolphins were intent on staying, we decided to head to the next station.  I knew that as the ship began to move that the bow would be breaking through surface water that had previously been undisturbed, and I predicted the bioluminescence would be much more intense.

As we took off, the dolphins began to bow surf and, as I predicted, the dinoflagellates were activated and this time their glow was a bright white.  As the dolphins surfaced to breath, their skin became coated with the glowing algal cells, creating an effect as if they were swimming in an X-ray machine.  The dolphins were literally glowing white swimming in a black sea! We were so entranced and excited by the beauty, we screamed in delight. I am sure the dolphins heard us cheering for them. They too, seemed excited and could see each other glowing as well.

Next we saw the faint cloud of dinoflagellates caused by Northern anchovies (Ily was right) up ahead of us. As the ship encountered the school of small (~ 3-6 inch) fish, they also started to glow really bright and it was easy to see all of the individual fish in the school. The dolphins could also see the glowing fish and split off in different directions to hunt them.  There were hundreds of fish that dispersed as they were being chased creating a pattern of short white glowing lines somewhat like the yellow lane markers on the highway.

The display was unlike anything I have ever witnessed. It was like the Aurora Borealis of the sea.  Despite our best efforts, our cell phone cameras were unable to pick up the bioluminescent signal, however, we do not need photos because the patterns of light will be forever embedded in our minds. The dolphins eventually tired from the surf and chase and departed. Ily said the experience was “an explosion of light that overwhelmed the senses” while Flora said it was “better than fireworks.”

With no marine mammal sightings at the third station, we completed a five minute haul in the deep channel and collected a huge white bin of anchovies (see photo of Keith Hanson with this catch below). In this catch we found a few Mexican lampfish, 3 king of the salmon, a lot of of large smooth tongues, a lot of salps, a few pyrosomes and one purple striped jellyfish.  The purple-striped jelly (Chrysaora colorata) is is primarily preyed upon by Leatherback turtles. Haul 2 was conducted over shallower water near San Nicolas Island and we only found salps and four small rockfish in the catch.  After these two hauls, we called it a night and wrapped up at 4:15 a.m.

Scientist Spotlight: Ilysa Iglesias, NMFS SWFSC FED/ University of California Santa Cruz (UCSC)

Ilysa “Ily” is a doctoral student who works in John Field’s Lab at UCSC.  She is studying the fish we are collecting on this cruise as part of her research. She is very knowledgeable about all of the survey research objectives. She is also one of the most positive and gregarious people I have every met. Ily grew up in Santa Cruz, CA, and enjoys surfing, hiking, gardening and raising chickens.   Ily is a fan of early marine explorer Jacques Cousteau, who often wore a red beanie/toboggan and a blue shirt. Ily came prepared and brought six red hats (that she knit herself) for each of the members of the sorting team. Ily’s favorite fish is the hatchetfish. She was thrilled when we found on in the catch!

Ilysa with hatchetfish
Ilysa Iglesias with deepsea marine hatchetfish
deepsea marine hatchetfish
A deepsea marine hatchetfish caught in the bongo which was deployed to depth of 265 meters.

Ily obtained a Bachelor’s degree from UC Berkeley in integrated biology and a Masters Degree from the University of Hawaii in Zoology with a specialization in marine biology.  Her thesis was on the function of intertidal pools as a nursery habitat for near-shore reef fish. She compared otoliths (fish bone ears) of fish reared inside and outside of tide pools and compared their growth rates.  Otoliths can be used to the age of the fish much like counting rings on a tree and stable isotope analysis reveals information about where the fish were reared.

Ily, Flora and Kristin have all used otoliths in their research and taught me how to locate and collect the sagittal otolith from anchovies and myctophids. It is a tiny ear bone (one of three) that is positioned near the hindbrain of fish.  See photos below of the otoliths we collected. This is a technique that I will definitely take back to my classroom and teach my McCallie students.

Otoliths
Otoliths we collected and observed under the dissecting microscope.
Photomicrograph of otoliths
Photomicrograph of otoliths we collected from blue lanternfish (top) and Northern Anchovy (bottom) and observed under the dissecting microscope.

After obtaining her masters degree, Ily was Conservation Fellow for the Nature Conservancy in HI and worked in octopus fisheries before returning home to join NOAA’s salmon team and then the rockfish team as a Research Associate.  Ily has just completed the first year of her doctoral work in the Field Lab and expects to complete the program within 5 years.

On this cruise, Ily is collecting small fish called Myctophids for her research. These are small bioluminescent fish that live at depths of 300 and 1,500 m in the bathypelagic zone. In this survey, we encounter these deep sea dwellers during their nightly vertical migration up to the edge of the photic zone at depths we are targeting.  They are likely chasing their prey (krill) on this upward journey. It is amazing to me they are able to withstand the pressure change. Mcytophids are also known as lanternfishes and have bioluminescent photophores dispersed on their bodies. The fish sorting team analyzes the position of these organs to help distinguish between the different species. There are 243 known species of myctophids, making these little fishes one of the most diverse vertebrates on Earth.  They are so abundant in the sea that they make up 65% of the ocean’s biomass, but most people have never heard of them!

In 2014- 2015 there was an anonymously high sea surface temperatures off of the Pacific Coast known as The Blob.  Marine scientists are still elucidating the effect of the hot water had on fish populations and ecosystems. Ily explains that “atmospheric forcing caused changes in oxygen and temperature resulting in variability in the California current.”  The water was less nutrient dense and caused a reduction in phytoplankton. This disruption of primary production propagated up the trophic cascade resulting in die offs of zooplankton, fish, marine mammals and birds.  

Ily is using the catch records and acoustics data from the rockfish survey to study changes in distribution and abundance of myctophids from before, during and after The Blob (2013-2019).  She aims to understand if and how their trophic position of myctophids was affected by the unusually high sea surface temperatures.   Using elemental analysis isotope ratio mass spectrometry to analyze the Carbon and Nitrogen atoms incorporated into fish muscle, Ily can determine what the myctophids were eating each year.

Jill Bartolotta: Sea You Later, June 13, 2019

NOAA Teacher at Sea

Jill Bartolotta

Aboard NOAA Ship Okeanos Explorer

May 30 – June 14, 2019


Mission
:  Mapping/Exploring the U.S. Southeastern Continental Margin and Blake Plateau

Geographic Area of Cruise: U.S. Southeastern Continental Margin, Blake Plateau

Date: June 13, 2019

Weather Data:

Latitude: 29°44.7’ N

Longitude: 080°06.7’ W

Wave Height: 2 feet

Wind Speed: 21 knots

Wind Direction: 251

Visibility: 10 nautical miles

Air Temperature: 26.6° C

Barometric Pressure: 1014.4

Sky: broken

As I sit here on the bow, with the wind blowing in my face, as we travel back to land, I think about the past two weeks. I think about all the wonderful people I have met, the friendships I have made, the lessons I have learned, and how I have grown as a person. The sea is a truly magical place and I will miss her dearly. Although I am excited to trade in some tonnage and saltwater for my paddleboard and Lake Erie, I will really miss Okeanos Explorer and everyone aboard.

My time aboard Okeanos Explorer has been wonderful. I learned so much about operating a ship, the animals we have seen, and about ocean exploration. I have stared into the eyes of dolphins as they surf our bow, watched lightening displays every night, seen Jupiter’s moons through binoculars, watched huge storm clouds roll in, seen how sound can produce visual images of the ocean floor, had epic singing and dancing parties as we loaded the XBT launcher, done a lot of yoga, learned a lot about memes, eaten amazing food, taken 3 minute or less showers, smacked my head countless times on the ceiling above my bed, watched the sunrise every night, done laundry several times because I didn’t bring enough socks, looked at the glittering plankton on the bow at night, and laughed a lot.

Words cannot express it all so below are some of my favorite images to show you how awesome this entire experience has been. I will not say goodbye to the sea and all of you but I will say, “Sea You Later. Until we meet again.”

sunrise
Sunrise one morning.
Jill's Birthday Cake
Blowing out the candles on my birthday cake. Still so touched by the kind gesture. Photo Credit: Lieutenant Commander Kelly Fath, PHS
Jahnelle and ROV
Meeting the ROV, Deep Discoverer. Pictured is Explorer in Training, Jahnelle Howe.
Looking at dolphins
Looking at the dolphins on the bow.
Jill looks at dolphins
Watching the dolphins surfing the bow waves. Photo Credit: Kitrea Takata-Glushkoff
dark storm cloud
The calm before the storm.
final sunset
The final sunset with some of the amazing people I met at sea. Pictured from left to right: Jill Bartolotta (Teacher at Sea), Kitrea Takata-Glushkoff (Explorer in Training), and Jahnelle Howe (Explorer in Training). Photo Credit: Lieutenant Commander Faith Knighton