Justin Garritt: Precision in Science is Key. Calibrating Day and Ship Tour, September 5, 2018

NOAA Teacher at Sea
Justin Garritt
NOAA Ship Bell M. Shimada
September 5, 2018

Topic Today: Calibrating the Equipment and ship tour

Geographical area of cruise: Seattle, Washington to Newport, Oregon

Today’s Location and Weather: Beautiful sunny skies calibrating in Elliot Bay, Seattle, Washington

Date: September 5, 2018

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Today’s blog will focus on calibration and a tour of the beautiful ship.

Calibration is the act of evaluating and adjusting the precision and accuracy of measurement equipment. It is intended to eliminate or reduce bias in an instrument’s readings. It compares the standard measurement with the measurement being made by the equipment. The accuracy of all measurements degrade over time by normal wear and tear. The purpose of calibration is to check the accuracy of the instrument and with this information, adjustments can be made if it is out of calibration. The bottom line is that calibration improves the accuracy of the measurement device which improves quality.

We calibrate many things in life. For an example, many teachers at my school have smart boimagesards or promethean boards. These boards are interactive white boards that allow teachers to teach using more interactive tools. As a math teacher, I have had a promethean board in my classroom which acts like a large touch screen computer that I take notes on, teach lectures on, give student feedback on, and play math games on.

calibrating
A teacher calibrating their smart board in a classroom

They have improved the learning experience for students in my class and across the globe. In order for the screen to work most accurately, we must perform routine calibrations on the board. If we don’t, there is often errors and where we touch the screen is not what actually shows up on the board. When these errors begin to occur, we must calibrate the board or else we won’t be as accurate when writing on the board.

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Police officers and military personnel must also use calibration in their work. Officers must routinely calibrate their weapons for accuracy. When at a safe and secure range, officers will “site-in” their weapons to determine if their scope is accurate. They will then make modifications to their weapons based on the calibration tests. This is another form of calibrating that improves the quality and accuracy of the equipment.

On board the NOAA Ship Bell M. Shimada, calibration typically happens at the start and end of most legs. Sometimes the Chief Scientist will also make the decision to calibrate mid-leg. For the past two days we have been spending 12 to 15 hours per day calibrating the equipment to ensure the most accurate research can be completed and we can meet the goals of the leg.

Calibrating the equipment is an interesting process that involves the teamwork of all the scientists on board. The process begins with three scientists setting up down riggers on the outside of the boat. Two are set up on starboard side (right side of the ship) and one is set up on port side (left side of the ship). This creates a triangle which will allow the calibration sphere or what I like to call,  “the magic sphere”  to move in whatever direction needed. This same triangle shaped design is used to move cameras that fly above players in the Superbowl.

 

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The picture above shows how three lines suspended from down riggers that are attached to the sphere.

The pictures (with captions) show the process step by step.

We calibrated for two full days. It was surprising how long the process took. After  explanations from the many scientists on board I learned that the process is so long because we are assessing numerous acoustic transducers under the ship.  Then, for each transducer, we are calibrating the old acoustic system and the new acoustic system.

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All smiles at the end of calibration as we head out to continue our mission at sea:-)  In this photo: NOAA TAS Justin Garritt, Scientist Volunteer Heather Rippman, and Future Scientist Charlie Donahue (and roommate)

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A Tour of the ship

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NOAA Ship Bell M. Shimada

NOAA Ship Bell M. Shimada is an incredible vessel that sails for months at a time. It has a crew of over 40 people (who I will be discussing in future blogs). The ship is a science lab with most state of the art equipment and also home for the crew on board that make the boat run 24 hours a day for 365 days a year. Here is a quick behind the scenes look at this remarkable vessel.

The Deck: When you embark the ship, the first thing you see is a huge deck with massive pieces of equipment. Each item has a different purpose based on what scientific study is taking place throughout the leg of the journey.

The Bridge: This is where the captain and his crew spend most of their day. The bridge has all of the most up-to-date technology to ensure we are all safe while on board. Operations occur 24 hours a day, so the ship never sleeps. Officers on the bridge must know what is happening on the ship, what the weather and traffic is like around the ship. The bridge has highly advanced radar to spot obstacles and other vessels. It also is the center of communication for all units on board the ship.

The Galley and Mess Hall: I expected to come on board and lose weight. Then I met Arnold. He is our incredible galley master who makes some of the best meals I have had on a ship. Yes, this better than food on a buffet line on a cruise. Arnold works his magic in a small kitchen and has to plan, order, and organize food two weeks out. Breakfast, lunch, and dinner are all served at the same time everyday. The food is prepared and everyone eats in the mess hall. Beverages, cereal, salad, and most importantly, ice cream are available 24 hours a day, so there is no need to ever be hungry. Every meal has a large menu posted on the television monitor and you can eat whatever you want. Every meal so far has been amazing.

Staterooms: Sleeping quarters are called staterooms and most commonly sleep two people. Each stateroom has its own television and a bathroom, which is called a head. As The bunks have these neat curtains that keep out the light just in case you and your roommate are working different shifts.

Laundry Room: There are three washer machines and three dryers that crew can use to clean their clothes during off-duty hours

The Entertainment Room:  The living room of the ship. This room has a large screen TV,  comfy recliners, and hundreds of movies, including new releases.

The Acoustics Lab: The acoustics lab is like the situation room for the scientists. There are large computer screens every where that can monitor all of the things the scientists are doing. For the past two days, Rebecca, our Chief Scientist, along with other scientists, lead the calibration from that room.

The Wet Lab: The wet lab will be used to inspect and survey the hake when we start fishing later this week.

I only just began my exploration of the ship. I will have so many more places to share throughout the journey. Later this week I will be asking our Chief Engineer to take me on a behind the scenes tour of “below deck” which is where they turn salt water to freshwater, handle all trash on board, etc. I will also be asking a member of captain’s  officers to teach me a little about the navigation equipment up in the bridge. I will be sure to write about all I learn in future blogs.

Thank you for continuing to join me on this epic adventure.

Justin

 

 

 

Cathrine Prenot: How a Fool Bird Regained its Footing. August 11, 2016

NOAA Teacher at Sea
Cathrine Prenot
Aboard Bell M. Shimada
July 17-July 30, 2016

Mission: 2016 California Current Ecosystem: Investigations of hake survey methods, life history, and associated ecosystem

Geographical area of cruise: Pacific Coast from Newport, OR to Seattle, WA

Date: August 11, 2016

Weather Data from the Bridge: N/A

Science and Technology Log

Marine Mammal Excluder Net on the Bell M. Shimada.
Marine Mammal Excluder Net on the Bell M. Shimada.

Unreeling the nets behind the ship and trawling is the equivalent of ringing a dinner bell at sea. We may not even be in sight of land, but as soon as the fishermen begin to unroll the huge nets, birds begin descending from the skies, appearing in the distance, and gliding on their wings over the waves.

Black Footed Albatross. Photo By Kathryn Willingham
Black Footed Albatross. Photo By Kathryn Willingham

The birds are arriving in hopes of getting a part of the catch or the bycatch. They will patiently wait until fish that have been measured and weighed are tossed overboard, and were particularly fond of Walleye Pollock liver from the Oscar Dyson. Sometimes marine mammals like Pacific White Sided Dolphins will also show up, but all fishing operations stop when they are in the waters around the ship—we don’t want to encourage them to associate nets with dinner.

White Sided Pacific Dolphins. Photo By Kathryn Willingham
Pacific White Sided Dolphins. Photo By Kathryn Willingham

Some of my favorite birds to watch are the albatross. They are enormous, with a six foot wingspan and feet wide enough to surf in the wake of the ship before splashing down. All of the albatross I saw were Black Footed, but one of the scientists on the ship, Ryan Shama from the West Coast Groundfish Observer Program, told me to keep an eye out for birds that looked like a black footed albatross but with a bright bubble gum pink bill. These were the “vulnerable” Short Tailed Albatross, and there were only about 4,750 in the world—up from 25 individuals in 1954.

Black Footed Albatross. Photo By Kathryn Willingham
Black Footed Albatross. Photo By Kathryn Willingham

I got pretty excited a few times, but evidently their bills are REALLY pink, not just pink-ish.

Short tailed albatross populations are rebounding after a pretty devastating 200 years. They were collected for food, but their numbers really declined through feather hunting, which was fueled by a ladies’ fashion craze.

Photo from here.
Photo from here.
Photo from here.

To give you an idea of the scale of this craze, below is the full bird count from two afternoon walks in 1886 through the streets of NYC by Frank Chapman, an Ornithologist at the American Museum of Natural History:

“Robin, four. Brown thrush, one. Bluebird, three. Blackburnion warbler, one. Blackpoll warbler, three. Wilson’s black-capped flycatcher, three. Scarlet tanager, three. White-bellied swallow, one. Bohemian waxwing, one. Waxwing, twenty-three. Great northern shrike, one. Pine grosbeak, one. Snow bunting, fifteen. Tree sparrow, two. White-throated sparrow, one. Bobolink, one. Meadow lurk, two. Baltimore oriole, nine. Purple grackle, five. Bluejay, five. Swallow-tailed flycatcher, one. Kingbird, one. Kingfisher, one. Pileated woodpecker, one. Red-headed woodpecker, two. Golden-winged woodpecker, twenty-one. Acadian owl, one. Carolina dove, one. Pinnated grouse, one. Ruffed grouse, two. victorian hatQuail, sixteen. Helmet quail, two. Sanderling, five Big yellowlegs, one. Green heron, one. Virginia rail one. Laughing gull, one. Common tern, twenty-one. Black tern. one. Grebe, seven.” (from here )

All of these birds were on women’s hats. Of the 700 hats he counted, 543 were decorated with feathers.

And then let’s start looking at the specifics of the decimation of the albatross population:

“From the mid-19th to the early 20th century it was highly fashionable to wear extravagant hats decorated with feathers, wings and even whole birds. In 1875, the magazine Harper’s Bazaar described one such hat: “The entire bird is used, and is mounted on wires and springs that permit the head and wings to be moved about in the most natural manner.” The demand for feathered headwear was enormous. By 1886 more than five million birds were harvested annually for the millinery trade in North America. Large albatross feathers were popular, and hunters harvested hundreds of tons of feathers annually—first from Japanese islands and then from Northwestern Hawaiian islands where albatrosses breed. In 1904 Japanese hunters killed 285,000 albatrosses on Lisianski Island in six months, then another 70,000 albatrosses on Laysan Island that same year—just for feathers. All over the world many species of birds were hunted for their plumage, to near extinction.”  (from here)

The Short Tailed Albatross nested almost exclusively on one island in Japan, and “feather hunters” killed an estimated 5 million birds over many years. The birds wouldn’t move as the feather hunters moved among them, clubbing them to death, giving them the name “Ahodori” in Japanese, which means “fool bird.”

From here. The site is also a good read.
From here.

But you can read all about it in Adventures in a Blue World: “The Fool Regains its Footing.”

Adventures in a Blue World: The Fool Regains its Footing. CNP
Adventures in a Blue World: The Fool Regains its Footing. CNP

Personal Log

The scenery on the last day at sea was pretty wonderful. The Strait of Juan de Fuca is absolutely gorgeous, and although we traveled a lot of it under the cover of darkness, I went up on the flying bridge at dusk and loved watching huge container ships in the channel next to us. After being on the largest ship for two weeks—with smaller fishing vessels keeping about a mile or more radius and having the ocean be the whole world around you, it was somewhat comforting to see land on either side and ships many times more massive than us cruising calmly by. Once day broke, we got to see constant ferry traffic between the islands around Seattle, and tons of small boats scurrying around us like ants.

As you might note from the dates, I am no longer out at sea. We pulled into the port of Seattle on August 30, and I made a beeline to the airport thanks to some of the scientists, and got home in time to start work the next day.   I am SO very thankful for the crew, Corps, and scientists from the Shimada for making me feel so welcome and including me in all of their work. I have a few more cartoons to go, so will continue to blog, but I won’t be able to report to you in as much detail all of the “freedom of the seas” that I was granted on the Shimada.

It's a tough life, being a Teacher at Sea!
It’s a tough life, being a Teacher at Sea!

 Did You Know?

Pacific White Sided Dolphins are extremely acrobatic and live and travel together in groups of up to 100 individuals!

Resources:

Interesting articles on the bird hat craze. This one, and this one, and oh yeah, one more.

Cathrine Prenot: Introduction, July 8, 2016

NOAA Teacher at Sea
Cathrine Prenot
Aboard the Bell M. Shimada
July 17-July 30, 2016

Mission: Pacific Hake Research
Geographic area of cruise:
Newport, OR – Seattle, WA
Date:
Friday, July 8, 2016
Weather Data from the Bridge: N/A

Personal Log
In 2011 I was honored to learn and work aboard the NOAA ship the Oscar Dyson in Alaska as a Teacher at Sea, and I can’t tell you how many people told me that it was the trip of a lifetime.  Imagine my excitement to learn that I get to return to sea as a Teacher at Sea alumni aboard the Bell M. Shimada.  The way I see it is that I get two trips of a lifetime, in one lifetime!  I feel pretty lucky.

On my first Teacher at Sea voyage, I documented my trip via a cartoon series called Adventures in a Blue World, a tribute to Sylvia Earle’s book The World is Blue.  This time I will once again do my best to bring to life my Teacher at Sea experiences via a second volume of cartoons.  You can read the introduction below on being selected as a Teacher at Sea, Hake, and the beginning of this next adventure.  (Cartoon citations 1, 2, and 3)

Adventures in a Blue World, CNP, 2016
Adventures in a Blue World, CNP, 2016 Click on the image to open in a new window

I have been an educator for nineteen years, and now live and work in West Texas–on the Llano Estacado–in Lubbock.  I’m a science instructional coach at Estacado High School, which basically means that I get to collaborate with teachers and students to develop great labs and activities.  It is a wonderful job, and I am looking forward to bringing back real-world research and developing curriculum for our students.

I am going to miss my family, Ike, Madalyn, and Eva.  The girls love the water (even bringing inflatable fish into the house…), and Ike has run rivers all over the Southwest, but I get to go where no family and friends are allowed–from Newport, Oregon, to Seattle, Washington on the NOAA ship the Bell M. Shimada.  They will also be following along with me remotely.

Gulf of Mexico, 2014
Gulf of Mexico, 2014
The girls 'water' the garden
The girls ‘water’ the garden
Found Nemo: in living room
Found Nemo: in living room

Did you Know?

Some quick math for you: since its inception in 1990, Teachers at Sea have logged over 100,000+ hours of research on 8,200+ days at sea.  Crunching some quick numbers, this equals about 67 school years of professional development in Real Science-Real Research-and Real Experience.  Pretty nifty, eh?  See this link for more.

Until our next adventure,

Cat

Scott Davenport: Heading to Sea, May 21, 2012

NOAA Teacher at Sea
Scott Davenport
Aboard NOAA Ship Bell M. Shimida
May 21-May 27, 2012

Mission: Rockfish Survey
Geographical area of cruise: Eastern Pacific, off the California coast and next to the Mexican Border
Date: May 21, 2012

Personal Log

Hi, my name is Scott Davenport and I am excited to be a part of NOAA’s Teacher at Sea Program.  It is going to be great. I teach at Paul T. Albert Memorial School located in scenic Tununak, Alaska.  It is a Yup’ik village on the Bering Sea. Most families practice subsistence living. My subject is junior high generalist, meaning I teach everything. Last year, I had a great group of seventh and eighth graders. It was my first year in Alaska and as a full-time teacher. Everyone learned a lot.

Tununak Seventh and Eighth Graders. Can you tell it is the last day of school?

Teacher at Sea intrigued me because it opens wide array of possibilities. A consistent issue at our school is what comes next? Graduation is a celebration, but it also brings apprehension and uneasiness. There are not a wide range of jobs in the village. It is normally limited to fishing, teaching, being a cashier, store stocker, or bush pilot. A NOAA boat offers a wider range of careers.  My experience on the ship will help my students make connections to new possibilities. The long cruises followed by long breaks  fit with subsistence living. They can have the time to go on a two week moose hunt and not miss work. Being located on the sea, most of my students  are acclimated to spending time on the water. My experience will  open eyes.

While on board the Bell M. Shimada, we have seven objectives. Objective #1: Sample the epi-pelagic micronekton. That means–thanks to Cynthia explaining it to me–we are going to see what is living in the upper water column. The specific fish we are looking for are the  juvenile rockfish. We will also survey Pacific whiting, juvenile lingcod, northern anchovy, Pacific sardine, market squid and krill. Objective #2: Characterize prevailing ocean conditions and examine prominent hydrographic features. Objective #3: Map the distribution and abundance of krill. Objective #4: Observe seabird and marine mammal distribution and abundance. Objective #5: Collect Humboldt squid. Objective #6: Conduct deep midwater trawls to examine mesopelagic specimen. Finally Objective #7: Examine feeding habits of jellyfish. My personal objective is to not vomit at sea.

The three things I am looking forward to most are meeting new people, witnessing scientific research, and learning new, unexpected items. My three biggest concerns are falling overboard at night into a never-ending dark abyss, the food, and making sure I contribute to the work/use my time wisely.  I am also excited to have a break from snow.

In the fall, the stairs went down.