Andrea Schmuttermair: Tows Away! June 26, 2012

NOAA Teacher at Sea
Andrea Schmuttermair
Aboard NOAA Ship Oregon II
June 22 – July 3

Mission: Groundfish Survey
Geographical area of cruise: Gulf of Mexico
Date: June 26, 2012 

Ship  Data from the Bridge:
Latitude:  2805.26N
Longitude: 9234.19W
Speed:  10mph
Wind Speed:  5.86 knots
Wind Direction:   E/SE
Surface Water Salinity:  35.867 PPT
Air Temperature:  28.8 C
Relative Humidity: 86%
Barometric Pressure:  1010.51 mb
Water Depth:  96.5 m

Science and Technology Log


Sunrise
Sunrise on the Oregon II

Opisthonema oglinum, Lagadon rhomboides, Chloroscombus chrysurus…..yes, I have officially started dreaming about taxonomic names of our fish. It’s day 4 and I now have a much better grasp at identifying the variety of critters we pull up in our trawls. I am always excited to be out on deck when they bring up the trawl to see what interesting critters we catch. Surprises are great!

Do you want to know where the Oregon II is headed?

Check out Ship Tracker at http://shiptracker.noaa.gov/

If you click on the link above, you can see the path that our ship is taking to hit all of our stations for the survey. We often have station after station to hit- meaning as soon as we are done sorting and measuring, we have to bring in the next catch. Because some stations are only 3-5 miles apart, we sometimes have to do “double dips”, where we put in the trawl for 30 minutes, pull it up, and put it right back in again.

It’s been interesting to note the variety of our catches. Croakers, bumperfish, and shrimp have been in high abundance the last 2 days as we were in shallower water. Before that we had a couple of catches that had a high abundance of pinfish. When we take our subsample, we typically enter data for up to 20 of that particular species. We take length measurements on each fish, and on every fifth fish. We will also weigh and sex it (if sexing is possible).

Shrimp in the Gulf
A comparison of the various sizes of shrimp we pull up from our trawls.
Shrimp waiting to be measures
A relatively small catch in comparison to the 200+ we’ve been pulling up recently.

When we were in shallower waters, we had a significant increase in the number of shrimp we brought up. Tuesday morning was the first catch that did not have well over 200 shrimp (this is because we’ve been moving into deeper waters).  For the 3 commercial shrimp, white (farfantepenaeus setiferus), pink (farfantepenaeus duorarum), and brown (farfantepenaeus aztecus), we take 200 samples, as opposed to our high-quantity fish, where we will only take 20 samples. For each of the commercial shrimp we catch, we measure, weigh and sex each shrimp. I’ve gotten very good at identifying the sex of shrimp- some of the fish are much more difficult to tell. The information we get from this survey will determine the amount of shrimp that boats can take during the shrimping season in Louisiana and Mississippi. During the first leg of the groundfish survey, the data collected determined the amount of shrimp that could be caught in Texas. The groundfish survey is crucial for the shrimping industry and for ensuring that shrimp are not overfished.

Students- think of the food chain. What would happen if we overfished and took out too many shrimp? (Hint: Think of predators and prey.)

Sunrise
The trawl net at sunrise

We’ve now started doing 2 different tows  in addition to our trawls. Some of the stations are trawl stations, whereas others are plankton stations.

The trawl on deck
Alex, Alonzo and Reggie unloading the trawl net.

At a trawl station, we lower the trawl from the stern down to the ocean floor. The trawl net is meant for catching larger critters that live at the bottom of the ocean. There is a chain, also known as a “tickler”, which moves lightly across the ocean floor to lure fish to leave their hiding spots and swim into our net. The trawl is down for 30 minutes, after which it is brought back on deck to weigh the total catch, and then brought back into the wet lab for sorting.

Another important mission of the groundfish survey is to collect plankton samples. To do this, we use a Neuston tow and a bongo tow.

neuston tow
The Neuston tow about to pick up a lot of Sargassum- oh no!

The Neuston tow has a large, rectangular frame with a fine mesh net attached to it. At the end of the net is a large cylindrical bucket, called a codend, with a mesh screen meant for catching the organisms. In comparison to the trawl net, which has openings of 41.4mm , the Neuston’s mesh is only 0.947mm. This means the mesh is significantly finer, meant for catching some of the smaller critters and plankton that would otherwise escape the trawl net. The Neuston tow is put on the surface of the water and towed for 10 minutes. Half the tow is in the water while half is out. We end up picking up a lot of Sargassum, or, seaweed, that is found floating at the water’s surface. When we gather a lot of Sargassum, we have to sift through it and spray it to get out any of the organisms that like to hide in their protective paradise.

Bongo tow
The bongo tow on deck waiting to be sent down to about 3m from the ocean floor.

After we’ve completed the Neuston tow, we do the bongo tow.  The bongo’s mesh is even finer than the Neuston tow’s mesh at only 0.333mm. The bongo has 2 parts- a left and a right bongo (and yes they do look a little like bongo drums- hence their name). The top part of the bongo is a large cylinder with an open bottom and top. The net is attached to this cylinder, and again at the bottom of each side is cylindrical tube  called codends meant to catch the plankton. The bongo tow is meant to take a sample from the entire water column. This means that instead of riding on the surface of the water, it gets sent down to about 3 meters from the ocean floor (there is a sensor at the top that is 2m from the bottom of the net)  and brought back up immediately.

Sifting through the sieve
The remnants from our Neuston tow. This is the sieve we use to weed out what we want and don’t want.
bongo leftover
Here are our 2 samples from the bongo tow. The left one is preserved in ethanol and the right is preserved in formaldehyde (10% formalin and sea water)
Neuston tow samples
Here is a sample from the Neuston tow. Carefully camouflaged are thousands of crab megalops, aka juvenille crabs.

For both tows, it is important to rinse the nets to get any lasting organisms we might not see with our own eyes into our sample. Once we’ve done this, we bring the tubes back into the wet lab where we continue to rinse them through a sieve so that only certain items are leftover. In the Neuston, we often find small fish (usually less than 3mm), baby shrimp, crabs and Jessica’s favorite, the Sargassum fish. Most recently a few flying fish got caught in our Neuston tow. Prior to pulling it up, I was enjoying watching them flit across the water- they were about all we could see in the water in the middle of the night. After being rinsed thoroughly through the sieve, we preserve them by placing the sample in a glass jar with either ethanol or formaldehyde solutions. They are preserved in ethanol for DNA work and in formaldehyde for long-term preservation. These samples are then saved to send to a lab in Poland, which is the sorting center for the SEAMAP samples.

Flying fish
Flying fish we pulled up in our Neuston tow at nighttime.

Personal Log

My stateroom
My sleeping quarters (top bunk), also known as a stateroom. My roommate is Kristin, one of the scientists on board.

Well, I think I am finally getting used to the schedule of working the night shift. I am thankful that my bunk is on the bottom floor of the ship- which means it is completely dark- so that I can sleep during the daytime. Yesterday was probably one of the least busy days we’ve had so far, and because we were in deeper waters, our trawls were much smaller. This means I had a little more time to work on my blogs, which at times can be hard to fit in. It amazes me that we have internet access on the ship, and it’s not even as slow as I expected. It goes down from time to time, especially when the waters are rough. We’ve been fortunate to have pretty calm waters, aside from the first day.

You may have heard about Hurricane Debby on the news as it prepared to hit the Gulf. On Sunday, we were heavily debating heading back to Galveston to “bunker down” and ride out the storm. However, the storm that was forming seemed to dissipate and head in a different direction, thank goodness.  I was not thrilled about the possibility of heading back to port!

We had our first drills the day after we set sail. The drills- fire and abandon ship are distinguished by different types of bells, similar to using Morse code. The abandon ship drill was fun. We got to put on our survival suit, which is like a big orange Gumby suit. It not only protects you in cold water, but also makes you highly visible. I remember reading some of the former TAS blogs, and this picture was always in. Of course, I’ve got to add mine as well.

Survival Suit
Here I am in my survival suit. Judd also decided to be in the picture. 🙂

I’ve been having fun exploring different areas of the ship, even though there is only so far you can go on the ship. Yesterday, I went up to the bridge, which is the front of the ship where the captain or the NOAA Corps officers steer the ship from. You can think of it like a control center of an airplane. There are navigation charts (both computerized and paper) and radars that help guide the ship so it knows what obstacles are out there. There is a great view from the bridge that you don’t get anywhere else on the ship. It’s also fun to watch the folks down on deck when they are deploying the CTD or either of the 2 tows.

We’ve caught such an abundance of critters, I thought I’d share some of my favorite catches thus far:

cownose ray
Here I am holding a cownose ray (Rhinoptera bonasus)- my favorite catch yet. He weighed about 25lbs! This one was the highlight of my day as rays are some of my favorite ocean critters!

Atlantic sharpnose shark
One of the 4 Atlantic sharpnose sharks (Rhizoprionodon terraenovae) we’ve caught so far.

Sharksucker
A sharksucker (Echeneis naucrates)- these guys hang onto sharks to catch a ride- he’s still alive so is able to hang onto my arm!

Critter Query Time!

Critter Query #1: What is a fathom (in your own words please)?

Critter Query #2: What are the differences between skates and rays?

Jennifer Goldner: Sharks 101, August 18, 2011

NOAA Teacher at Sea
Jennifer Goldner
Aboard NOAA Ship Oregon II
(NOAA Ship Tracker)
August 11 — August 24, 2011

Mission: Shark Longline Survey
Geographical Area: Southern Atlantic/Gulf of Mexico
Date: August 18, 2011

Weather Data from the Bridge
Latitude: 26.05 N
Longitude: 84.05 W
Wind Speed: 5.20 kts
Surface Water Temperature: 30.30 C
Air Temperature: 31.20 C
Relative Humidity: 67.00%

Science and Technology Log

Living in the landlocked state of Oklahoma, I am unfamiliar with sharks.  Thus today, with the help of the scientists, I’m going to give some basics of sharks that I have learned this week.  Class title:  Shark 101.  Welcome to class!

Let me start by telling you the various sharks and amount of each we have caught this week in the Gulf of Mexico. We have caught 7 nurse sharks, 2 bull sharks, 4 sandbar sharks, 73 Atlantic sharpnose sharks, 15 blacknose sharks,  5 blacktip sharks, 5 smooth dogfish, 2 silky sharks, and 4 tiger sharks.  For those of you that took the poll, as you can see the correct answer for the type of shark we have caught the most of is the Atlantic sharpnose shark.   The sharks ranged in size from about 2 kilograms (Atlantic sharpnose shark) to 100 kilograms (tiger shark). Keep in mind a kilogram is 2.24 pounds. 

In addition to the sharks caught we have also caught yellowedge, red, and snowy grouper, blueline tilefish, spinycheek scorpionfish, sea stars, and a barracuda.

From the last post you now know that we soak 100 hooks at a time. Throughout the survey we have had as little as no sharks on the line in one location and up to 25 on the line in other locations.

Me holding a spinycheek scorpion fish
Me holding a spinycheek scorpionfish
Blueline tile fish
Blueline tilefish
Drew, Scientist, holding a barracuda
Drew, Scientist, holding a barracuda
yellowedge grouper
Yellowedge grouper

When a shark is brought on board, it is measured for total length, as well as fork length (where the caudal fin separates into the upper and lower lobes).  The sex of the shark is also recorded.  A male shark has claspers, whereas a female shark does not.  The shark’s weight is recorded.  Then the shark is tagged. Lastly, the shark is injected with OTC (Oxytetracycline) which can then be used to validate the shark’s age.  It should be noted that for larger sharks these measurements are done in the cradle.  For perspective, I had Mike, fisherman, lay in the cradle to show the size of it. Also on this trip, some of the scientists tried out a new laser device.  It shoots a 10 cm beam on the shark.  This is then used as a guide to let them know the total length.  Thus, the shark can actually be measured in the water by using this technique.

Do you see the 2 laser dots on the shark?  This 10 cm increment helps scientists estimate the length of the shark.

Mike, Fisherman, in the shark cradle- It is approximately 8 feet long.
Mike, Fisherman, in the shark cradle — It is approximately 8 feet long.
Shark diagram
Shark diagram
Mark Grace, Chief Scientist, weighs a shark
Mark Grace, Chief Scientist, weighs a shark
Male shark on the left (with claspers), female shark on the right (no claspers)
Male shark on the left (with claspers), female shark on the right (no claspers)
Mark Grace, Chief Scientist, and Adam, Scientist, measure a nurse shark in the cradle
Mark Grace, Chief Scientist, and Adam, Scientist, measure a nurse shark in the cradle
Mark Grace, Chief Scientist, assists me tagging an Atlantic sharpnose shark
Mark Grace, Chief Scientist, assists me tagging an Atlantic sharpnose shark
Tim, Lead Fisherman, holds the bull shark while I tag it!
Tim, Lead Fisherman, holds the bull shark while I tag it!
Giving antibiotics to an Atlantic sharpnose shark
Injecting OTC into an Atlantic sharpnose shark

Here are some things I learned about each of the sharks we caught.

1.  Nurse shark:   The dorsal fins are equal size.  They suck their food in and crush it.  Nurse sharks are very feisty.  See the attached video of Tim, Lead Fisherman and Trey, Scientist, holding a nurse shark while measurements are being taken.

The skin of nurse sharks is rough to touch.  Incidentally, all  types of  sharks’ skin is covered in dermal denticles (modified scales) which is what gives them that rough sandpaper type feeling.  If you rub your hand across the shark one way it will feel smooth, but the opposite way will feel coarse.

Dermal denticles, courtesy of Google images
Dermal denticles, courtesy of Google images
Cliff, Fisherman, getting a nurse shark set to measure
Cliff, Fisherman, getting a nurse shark set to measure

2.  Bull shark– These are one of the most aggressive sharks.  They have a high tolerance for low salinity.

Bianca, Scientist, taking a blood sample from a bull shark
Bianca, Scientist, taking a blood sample from a bull shark
bull shark
Bull shark
sandbar shark
Sandbar shark

3. Sandbar shark– These sharks are the most sought after species in the shark industry due to the large dorsal and pectoral fins.  The fins have large ceratotrichia that are among the most favored in the shark fin market.

4.  Atlantic sharpnose shark– The main identifying characteristic of this shark is white spots.

Atlantic sharpnose shark
Atlantic sharpnose shark

5.  Blacknose shark– Like the name portrays, this shark has black on its nose.  These sharks are called “baby lemons” in commercial fish industry because they can have a yellow hue to them.

blacknose shark
Blacknose shark
Me holding a blacknose shark
Me holding a blacknose shark

6.  Blacktip shark- An interesting fact about this shark is that even though it is named “blacktip,” it does not have a black tip on the anal finThe spinner shark, however, does have a black tip on its anal fin.

Jeff and Cliff getting a blacktip shark on board
Jeff and Cliff getting a blacktip shark on board
Tagging a blacktip shark
Tagging a blacktip shark

7. Smooth dogfish– Their teeth are flat because their diet consists of crustaceans, such as crabs and shrimp.

Travis, Scientist, weighing a smooth dogfish
Travis, Scientist, weighing a smooth dogfish

8. Tiger shark– Their teeth work like a can opener.  They are known for their stripes.

A large tiger shark got tangled in our line.  Notice the 2-3 foot sharpnose shark. The tiger shark is about 5 times larger!
A large tiger shark got tangled in our line. Notice the 2-3 foot sharpnose shark at the left. The tiger shark is about 5 times larger!
Me with a tiger shark
Me with a tiger shark
Daniel, Scientist, holding a tiger shark
Daniel, Scientist, holding a tiger shark

9.  Silky shark- Their skin is very smooth like silk.

Daniel, Scientist, holding a silky shark
Daniel, Scientist, holding a silky shark

Another thing I got to see was shark pups because one of the scientists on board, Bianca Prohaska, is studying the reproductive physiology of sharks, skates, and rays.  According to Bianca, there are 3 general modes of reproduction:

1.  oviparous–  Lays egg cases with a yolk (not live birth).  This includes some sharks and all skates.

2.  aplacental viviparous – Develops internally with only the yolk.  This includes rays and some sharks.  Rays also have a milky substance in addition to the yolk.  Some sharks are also oophagous, such as the salmon shark which is when the female provides unfertilized eggs to her growing pups for extra nutrition.  Other sharks, such as the sand tiger, have interuterine cannibalism (the pups eat each other until only 1 is left).

3. placental viviparous– Develop internally initially with a small amount of yolk, then get a placental attachment.  This includes some sharks.

Yet another thing that scientists look at is the content of the shark’s stomach. They do this to study the diet of the sharks.

Skate egg case, Courtesy of Google images
Example of oviparous- Skate egg case, Courtesy of Google images
Placental viviparous
Example of placental viviparous
Dogfish embryo, courtesy of Google images
Example of aplacental viviparous- Dogfish embryo, courtesy of Google images
Contents from the stomach of a smooth dogfish (flounder and squid)
Contents from the stomach of a smooth dogfish (flounder and squid)

Personal Log

Anyone who knows me realizes that I appreciate good food when I eat it.  Okay, on NOAA Ship Oregon II, I have not found just good food, I have found GREAT cuisine!   I am quite sure I have gained a few pounds, courtesy of our wonderful chefs, Walter and Paul.  They have spoiled us all week with shrimp, steak, prime rib, grilled chicken, homemade cinnamon rolls, turkey, dressing, mashed potatoes, and gravy, and the list goes on!   Just talking about it makes me hungry!

Walter is a Chef de Cuisine.  I want to share with you two of the wonderful things, and there are many more, he has prepared for us this week.  The first is called ceviche.  On our shift we caught some grouper.  Walter used these fish to make this wonderful dish.

Grouper used to make ceviche
Grouper used to make ceviche

In addition to the grouper, the ingredients he used were lemon juice, vinegar, onions, jalapeno, kosher salt, and pepper.  He mixed all the ingredients together.  The citric acid cooks the raw fish.  It has to be fresh fish in order to make it.  Instead of lemon juice, apple juice or orange juice can be substituted.  All I know is that since I arrived on NOAA Ship Oregon II, I heard from the entire crew about how great Walter’s ceviche was and it did not disappoint!

Walter, Chef de Cuisine, with his award winning ceviche
Walter, Chef de Cuisine, with his award winning ceviche
Walter's maccaroons
Walter’s macaroons

Another thing Walter is famous for on board NOAA Ship Oregon II are his macaroons.  These are NOT like ANY macaroons you have ever tasted.  These truly melt in your mouth.  Amazingly, he only has 4 ingredients in them: egg whites, powdered sugar, almond paste, and coconut flakes.  They are divine!!

On another note, I would like to give a shout out to my 5th grade students in Jay Upper Elementary School!  (I actually have not had the chance to meet them yet because I am here as a NOAA Teacher at Sea.  I would like to thank my former student, Samantha Morrison, who is substituting for me.  She is doing an outstanding job!!)

Dolphin swimming alongside the ship
Dolphin swimming alongside the ship

Jay 5th Grade:  I cannot wait to meet you!  Thank you for your questions!  We will have lots of discussions when I return about life at sea.  Several of you asked if I have been seasick.  Fortunately, I have not.  Also, you asked if I got to scuba dive.  Only the dive crew can scuba dive.  We are not allowed to have a swim call (go swimming) either.  As you can see, there is plenty to do on board!  Also, you may have noticed that I tried to include some pictures of me tagging some sharks.  Lastly, this dolphin picture was requested by you, too.  Dolphins LOVE to play in the ship’s wake so we see them every day.

Enjoy the view!

I LOVE the scenery out here!  I thought I’d share some of it with you today.

I thought these clouds looked like dragons. What do they look like to you?
I thought these clouds looked like dragons. What do they look like to you?
The vertical development of clouds out here is amazing!
The vertical development of clouds out here is amazing!
Starboard side at sunset
Starboard side at sunset
Sunset from the stern
Sunset from the stern
Sunset in the Gulf of Mexico aboard NOAA Ship Oregon II
Sunset in the Gulf of Mexico aboard NOAA Ship Oregon II
Sunset, port side
Sunset, port side