Jessica Cobley: While in Kodiak, July 19, 2019

NOAA Teacher at Sea

Jessica Cobley

Aboard NOAA Ship Oscar Dyson

July 19 – August 8, 2019


Mission: Midwater Trawl Acoustic Survey

Geographic Area of Cruise: Gulf of Alaska (Kodiak to Prince William Sound)

Date: Saturday, July 20th, 2019

Weather Data from Kodiak, AK: 4:00am Lat: 57.79° N Lon: 152.4072° W Temp: 56 degrees F.  


Personal Log

Good morning! It is currently 4:30am on Saturday, July 20th and I have just woken up for my first shift on the boat. So far, I have met scientists Abigail McCarthy and Troy Buckley, who will be working the day shift with me. I also met Ruth, an intern from the University of Washington and my bunkmate. It will be nice to have someone else on board who is also new to the experience! 

exploring Spruce Cape
From left to right: Myself, Ruth, Abigail and Darin exploring Spruce Cape. Photo Credit: Troy Buckley

Before talking about work, I’d like to share what we got up to in Kodiak before departing on the cruise. One thing to note – Chief Scientist Darin Jones explained that because this is the 3rd leg of the survey and the scientists are taking over from the previous group, we do not have any set up or calibration of equipment to do. If this had been leg 1 of the survey, the free days in port would have been spent doing those jobs. Lucky us!

After unpacking everything in our state rooms (bunks), we quickly set out to explore Kodiak. In two and a half days, were able to see a lot! Wednesday night, some friends of mine in town took us for a stroll on Near Island, followed by a yummy dinner at Noodle Bar.

Near Island
Walking with friends on Near Island, just across the bridge from Kodiak. Photo by Ruth Drinkwater

Thursday morning, team building began with a run to Safeway and Walmart for all last minute necessities. The teacher in me couldn’t resist a fresh pack of sharpie markers and colored pencils. 🙂 In the afternoon, we walked along Spruce Cape where we picked a TON of blueberries and found the largest barnacle I have ever seen. 

Check out this Giant Acorn Barnacle!

After a short recoup back on the boat, Darin and Abigail were ready for an evening surf session at Fossil Beach. This beach is the farthest south you can access by road in Kodiak and the drive was BEAUTIFUL. Prior to the trip, I hadn’t looked up any pictures of Kodiak and so the treeless green mountains, cliffy coastlines and herds of cows were exciting to see. Once at the beach, we jumped in the ocean, watched a successful surf session and finished our team building with a fire and dinner on the beach. 

Fossil Beach
Fossil Beach: We hiked up the cliffs in the background to check out old WWII bunkers.
grazing cows
Happily grazing cows on the drive back from Fossil Beach.


Science and Technology Log

In just a few days of being here, I have already learned a lot about the workings of the ship and what we will be busy doing for the next three weeks. Here is a preview.

To begin, science shifts run from 4am – 4pm and 4pm – 4am. Throughout this entire time, acoustic data is being collected and read. Acoustic data is gathered by sending out sound waves from a transducer box attached to the bottom of a centerboard underneath the boat. The sound waves reverberate out and bounce off of anything with a different density than water. In the picture below, you can see a bold line on the screen with smaller dots above. Take a look and see if you can identify what the line and dots might represent.

Darin looks over morning acoustic data
Chief Scientist Darin Jones looking at the morning acoustic data. This room is called “The Cave” because it is the only lab without windows.

If you thought the big bold lines on each screen were the seafloor, you were correct! Most of the little dots that appear above the sea floor are fish. Fish are identified from the sound waves bouncing off of their swim bladders. Swim bladders are the “bags” of air inside fish that inflate and deflate to allow the fish to raise and lower itself in the water column. Air has a different density compared to water and therefore shows up in the acoustics data.

acoustic data screen
Close up view of the acoustic data screen.

What is this acoustic data used for? There are 2 primary parts. The first is to identify where schools of fish are located and therefore areas well suited for collecting fish samples. The second is to calculate the total biomass of pollock in the water column by combining acoustics data with the actual measurements of fish caught in that same area. More specifics to come as I take part in the process throughout the survey. 

Did You Know?

On this survey, scientists do not catch/survey fish at night (when it is dark). The reason? At night, bottom dwelling species come up off the seafloor at night to feed. During the day they settle back down on the seafloor. The scientists are primarily interested in catching pollock, a mid water species, so they fish during daylight hours. 

hauling in the trawl net
View from the upper deck of the trawl net being hauled in.

Updates to come later in the week. It is time for me to join the scientists and get ready process our first catch! 

Cheers, Jess

Jessica Cobley: An Introduction, July 15, 2019

NOAA Teacher at Sea

Jessica Cobley

NOAA Ship Oscar Dyson

July 17 – August 8, 2019


Mission: Midwater Acoustic Trawl Survey

Geographic Area of Cruise: Gulf of Alaska (Kodiak to Aleutian Islands)

Date: Monday, July 15th, 2019

Weather Data from Juneau, AK: 8:50am Lat: 58.35° N Lon: 134.58° W 

Personal Log

Hello everyone. In just a few days I will be swapping out halibut fishing in Juneau, AK for surveying walleye pollock in the Gulf of Alaska (GOA)…and I can’t wait! Our cruise on NOAA Ship Oscar Dyson will depart from Kodiak Island and sail out along the Aleutian Islands, a place I have yet to see or experience since moving to Alaska. 

Jessica halibut fishing
Fishing for Halibut near Holkham Bay. This photo was taken just after the fillet had slipped out of my hands and onto the boat deck…guess I’ll benefit from fish handling practice on the cruise! Photo Credit: Laura Maruhashi

Three years ago, I left a curriculum consulting job in Portland, OR to begin teaching in Juneau. Prior to Oregon, I was living overseas in Australia, where I completed my Masters in Education and spent time with the Australian side of my family. I am incredibly excited to now call Juneau my home and be in the classroom as both an educator and a learner. Alaska is such a unique and special place – sometimes I still can’t believe I live here! 

Currently, I work as a 7th grade Life Science teacher at Floyd Dryden Middle School. Not only is middle school my favorite age of kids to teach (yes, you heard that right), but I also love the curriculum we get to share with them. One main focus during the school year is to teach about ecosystems. Two years ago I developed a unit, along with NOAA Scientist Elizabeth Siddon, that focuses on how commercial fisheries quotas are set in Alaska. The lessons range from data collection and stakeholder input to presenting recommendations to the North Pacific Fisheries Management Council. Alaska takes several different aspects of the ecosystem into consideration when setting quotas and I think it is a great way for students to see how the science they learn in school can be applied to real life careers. 

7th grade students
Students in my 7th grade life science class presenting ecosystem risk table recommendations to a panel of scientists for sablefish quotas in the Gulf of Alaska.

I myself have never had the chance to work as a scientist. That is why I am so excited for the opportunity to participate in data collection and analysis alongside a research team right here in Alaska. It will be fantastic to bring what I learn back to my students and be able to give them an even better understanding what being a scientist can entail. 

Lastly, outside of teaching, I try to enjoy all of the outdoor activities Juneau has to offer. With the recent streak of unusually warm and sunny weather, my friends and I have been boating, swimming, and hiking as much as possible. While it will be hard to leave those things behind, I am looking forward to this next adventure! 

Jessica hiking
Midway through a hike from Granite Creek Basin to Mount Juneau. Photo Credit: Laura Maruhashi


Science and Technology Log

The research team on NOAA Ship Oscar Dyson is conducting an acoustic-trawl (AT) survey to collect data, primarily on walleye pollock, to be used in stock assessment models for determining commercial fisheries quotas. When collecting data, scientists will work in 12 hour shifts and be looking to determine things such as species composition, age, length distribution etc. 

NOAA Ship Oscar Dyson
NOAA Ship Oscar Dyson. Photo Credit: NOAA

Trawl fishing, for those of you unfamiliar, is a method of fishing when a net of particular size is pulled through the water behind a boat. Oscar Dyson is a 64 meter stern trawler that contains acoustic and oceanographic instruments to collect the necessary data. After researching online, I learned that the main instrument used is a Simrad EK60 split-beam echosounder system. Look for more information about what this instrument is (and others) in future blog posts! 

Did You Know?

Alaska pollock is one of the largest commercial fisheries in the world! 

Thank you for reading and I am looking forward to sharing more about life out at sea!