Wes Struble: Arrival and Departure, February 19, 2012

NOAA Teacher at Sea
Wes Struble
Aboard NOAA Ship Ronald H. Brown
February 15 – March 5, 2012

Mission: Western Boundary Time Series
Geographical Area: Sub-Tropical Atlantic, off the Coast of the Bahamas
Date: February 19, 2012

Weather Data from the Bridge

Position: 26 deg 30 min MN Latitiude & 71 deg 55 min Longitude
Windspeed: 15 knots
Wind Direction: South (bearing 189 deg)
Air Temperature: 23.2 deg C / 74 deg F
Atm Pressure: 1013.9 mb
Water Depth: 17433 feet
Cloud Cover: 30%
Cloud Type: Cumulus

Personal Log

With some minor travel changes in Seattle and a redeye flight into Charleston, South Carolina I arrived at NOAA Ship Ronald H. Brown at about 10:30 am Tuesday morning – tired but grateful. We left port mid-morning the next day and headed south/southeast. On the way out of port we were treated to a dolphin escort – five or six dolphins surfed our bow wave for half an hour or more. I share a stateroom with another teacher, David Grant. My stateroom  is comfortable and I will be sleeping on the upper bunk – a somewhat tight fit and something I haven’t done since my brother and I were sharing a room while we were in junior high school.

The Ronald H. Brown docked at the pier before our departure

David Grant, my fellow teacher-at-sea, working in our stateroom
A Dolphin escort off the bow of the Ron Brown as we head out of Charleston

The Ron Brown is the largest ship in the NOAA fleet. She was commissioned in 1997 and is named in honor of Ronald H. Brown, Secretary of Commerce under the Clinton Administration who died in a plane crash on a trip to Bosnia. With a length of just under 280 feet the Ron Brown has ample deck space for hauling all the various amounts of materials and equipment needed for a research cruise.  The ship’s captain is Captain Mark Pickett, the Executive Officer is Lieutenant Commander Elizabeth Jones, the operations officer is Lieutenant James Brinkley, the medical officer is Lieutenant Christian Rathke, with Ensign Aaron Colohan, and Ensign Jesse Milton making up the remaining officers. The entire ship’s complement is divided up between the NOAA Corps crew members, the merchant marines, and the science staff. For this trip we have approximately 50 people on board including the crew and the scientists.  From the science group there are four of us that will be dividing up the CTD watch: David Grant, Shane Elipot, Aurélie Duchez, and myself. As I mentioned earlier, David Grant is my Teacher at Sea colleague for this cruise. He hails from Sandy Hook, New Jersey which is considered the most northern sandy beach in the state. David teaches a variety of science courses at a community college. Shane & Aurélie are from France (although they both currently work in the UK for the Natural Environment Research Council).

A Coast Guard Ship shared the pier with the Ron Brown
The Arthur Ravenel Jr. Bridge over the Cooper River, Charleston SC - a fine example of a graceful Cable Stay Bridge
A view of the Arthur Ravenel Jr. Bridge from below as the Ron Brown passes under the bridge
A view of Fort Sumter - one of the icons of the War between the States
A mass of sargassum (floating seaweed) - from which we derive the name of this part of the Atlantic Ocean - the Sargasso Sea

After the Brown got underway we had the first of many drills. All of the science crew met in the main lab where one of the NOAA Corps officers, ENS Jesse Milton, reviewed the proper use of the rescue breathing apparatus, the Gumby suit, and the PFD (personal flotation device). When the meeting was over we had three practice drills: Fire/Emergency, Abandon ship, and Man Overboard. Each of these emergency situations has their own alarm bell pattern and all those aboard have particular responsibilities and particular muster stations to which they are to report.

A Fire/Emergency is identified by a long (10 seconds or more) continuous alarm bell. When the bell sounds everyone is to move to their assigned stations. The science crew is to go to the main lab and await instructions. If the main lab is actually where the fire or emergency is located our second muster point is the mess.

A series of short blasts (at least 6) followed by a long continuous blast indicates Abandon ship. When this alarm sounds you are to drop whatever you are doing return to your stateroom and retrieve your PFD and Gumby suit and report to your muster station. In addition to the life saving articles, you should be wearing long pants, a long sleeve shirt, and a hat (to protect you from exposure while drifting at sea in the life boat). For this emergency situation I am to report to fire station 15 with a number of other members of the crew and be ready to load into a lifeboat.

Three long alarm bells announce a man overboard. During this emergency different groups of people are assigned different positions around the ship to look for and point to the person who has gone overboard. When the floating person is spotted, all those on deck are to indicate the overboard person’s position by pointing with their outstretched arm. A person floating in the water produces a very low profile and can be very difficult to see from a small boat bouncing in the waves. If the rescue team has trouble locating the floating person they can look up at the ship and see where all the spotters are pointing. This can direct them toward the overboard person’s location.

Elizabeth Bullock: We Are Underway! December 11, 2011

NOAA Teacher at Sea
Elizabeth Bullock
Aboard R/V Walton Smith
December 11-15, 2011

Mission: South Florida Bimonthly Regional Survey
Geographical Area: South Florida Coast and Gulf of Mexico
Date: December 11, 2011

Weather Data from the Bridge
Time: 2:30pm
Air Temperature: 24.5 degrees C (76 degrees F)
Wind Direction: 65.9 degrees east northeast
Wind Speed: 15.8 knots
Relative Humidity: 78%

Science and Technology Log

Today is the first day of the research cruise.  The R/V Walton Smith left its home port in Miami, FL this morning at about 7:30am.  After a delicious breakfast, the crew and scientific party received a safety briefing from Dave, the Marine Tech.  We learned about the importance of shipboard drills and we were shown the location of all the safety gear we might need in case of an emergency.  This ship works like a self-contained community.  The crew of the ship must also be the policemen and firemen (or policewomen and firewomen).

After our safety briefing, the science party went outside to our first station of the day.  The first piece of equipment we put into the water was a CTD.  The CTD is named after the three factors the equipment measures: conductivity, temperature, and depth.  The CTD will be deployed at precise locations along our route.  Since they conduct this research cruise twice a month, they can see if conditions are changing or staying the same over time.

Liz at computer
Here I am, reading the data that came up from the CTD.
CTD
This is the CTD, which measures conductivity, temperature, and depth.

Question for students: What is the relationship between salt and electrical conductivity?  If the salt content in the water increases, will it conduct electricity better or worse?

The next piece of equipment we deployed was the Neuston Net.  This net sits at the water line and skims organisms off the surface of the ocean.  The net is in the water for 30 minutes at a time.  After bringing the net onto the deck, the fun part starts – examining the contents!  Our Neuston Net had two main species: moon jelly (Aurelia) and sargassum.  The term sargassum actually describes many species, so the scientists on board will study it carefully in order to classify which kinds they caught in the net.  Sargassum is an amazing thing!  It is planktonic (which means that it floats with the current) and it serves as a habitat for bacteria and small organisms.  Since it is such a thriving habitat, it is also a great feeding ground for many different species of fish.

Once we emptied the contents of the Neuston Net, Lindsey and Rachel, two of the scientists on board, began to measure the quantity of each species they caught.  In order to measure the weight of the moon jellies, they used the displacement method.  This is because we can’t use regular scales onboard.  Here are the steps we took to measure the moon jellies:

1)      We poured water into a graduated cylinder and recorded the water level.  For example, let’s say that we poured in 100ml of water.

2)      We put a moon jelly into the graduated cylinder and recorded the new water level.  For example, let’s say that the new water level read 700ml.

3)      We subtracted the old water level from the new, and we could tell the volume of the moon jelly we had caught.  For example, based on the numbers above, we would have caught a 600ml moon jelly!

Neutson Net
Lindsey examines what we caught in the Neuston Net.

Both the CTD and the Neuston Net will be deployed many times over the course of the cruise.

 

Personal Log

Despite a bit of seasickness, I am having a wonderful time!  Everyone on board is very welcoming and happy to answer my questions.  Everyone is so busy!  It seems like they have all been working nonstop since we arrived on board yesterday.

Answers to your questions

First, let me just say that these are great questions!  Good job, Green Acres.  Here are some answers, below.

1)      How do the currents make a difference in the water temp?  The currents play a major role in water temperature.  In the Northern Hemisphere, currents on the east coast of a continent bring water up from the equator.  For example, the Gulf Stream (which is a very important current down here in Florida) brings warm water from the tropics up the east coast of the United States.  This not only keeps the water temperature warm, but it also affects the air temperature as well.

2)      How does the current affect the different algae populations?  Currents regulate the flow of nutrients (which phytoplankton needs to survive).  Strong currents can also create turbidity, which means that it stirs up the water and makes it harder for light to penetrate the water column.  As you know, phytoplankton rely on sunlight to grow, so if less light is available, the phytoplankton will suffer.  I’m told by Sharein (one of the phytoplankton researchers) that algae are hearty creatures.  This means that as long as the turbid conditions are temporary, algae should be able to thrive.

Stephen Bunker: Sargassum Experiments, 21 October 2011

NOAA Teacher at Sea
Stephen Bunker
Aboard R/V Walton Smith
October 20 — 24, 2011

Mission: South Florida Bimonthly Regional Survey
Geographical Area: South Florida Coast and Gulf of Mexico
Date: 21 October 2011

Weather Data from the bridge

Time: 11:30 AM
Wind direction: Northeast
Wind velocity: 8 m/s
Air Temperature: 23° C (73° F)
Clouds: cirro cumulus

Science and Technology Log

Net Tow
That's me tending the Neuston net as it's being towed aside the R/V Walton Smith.

One of the many experiments we are doing on board is to learn about a plant that grows in the ocean called Sargassum. This tan plant floats near the surface and along in the current. It grows throughout the world’s topical seas. It can grow into large mats the and can be as large as boats and ships. Sargassum provides an environment for distinctive and plants and animals that are not found other places. These ecosystem rafts harbor many different organisms.

On the third stop of the CTD cycle we drag a Neuston net along side of the boat. For 1/2 hour, night or day, the boat takes a slow turn as we drag the net along the surface as we collect samples.  Almost all of the animals below are what we have found in the Neuston net.

We’ll haul in the net and remove the contents. We’ll first try to get all of the animals out. The animals usually don’t survive but every once in a while we can save them (see below for some of the animals we captured with the net).

We’ll next sort the plant life that we collect in the net. Of course we are looking for Sargassum, so we will separate out all of the sargassum.

So, how do you measure what you get? We measure it by volume much like our mom’s measure shortening for cookies. We will fill up a graduated cylinder part way with water, put the samples from the net into the cylinder and then measure how much water they displace.

For example, if we put 2500 ml of water in the graduated cylinder, then put Sargassum in the cylinder, the water level now measures 5500 ml . We then know that there are 3000 ml  (5500 ml – 2500 ml = 3000 ml) of Sargassum by volume measure.

Everything we collect from the net, we measure and record.

Personal Log — Animals I’ve seen

  • Flying Fish— Yes, believe it or not, there are fish that fly. Last night as were preparing to lower the CTD, I noticed silvery-blue streaks in the water. One of the scientists with me explained that they are Flying Fish (Exocoetidae) and the lights of our vessel attracts them and many other types of fish to the surface at night. As soon as she explained this, one of them shot out of the water and glided about a meter and ducked back into the water. Read more about Flying Fish here.
  • Rock Fish
    This fish was found as we unloaded the Moch net.

    Rock Fish — Each time we drag the Moch Net for the Sargassum survey, we can expect interesting things. Last night we captured a type of Rock Fish.

  • Spotted Eel — We also found an eel that has white spots. I tried my best to see if I could more specifically identify it. We have saved it in an aquarium on board the R/V Walton Smith.
  • Mystery Fish
    Help identify this mystery fish. Make a comment below if you think you know what it is.

    Mystery Fish — This fish has many of us stumped. It has a long nose but when the fish opens its mouth, you can see that the pointy part is connected to its lower jaw. Put your investigative skills to use and help me identify the fish. Post a comment if you think you know what it is. For an enlarged view, click here.

  • Moon Jellies — Many people call them Jelly Fish but actually they don’t belong to the fish family at all. They don’t even have a backbone. When we carefully picked these animals up, with gloves on of course, it feels like picking up Jello with your hands; it just slips through your fingers. You can find more about Moon Jellies, Aurelia aurita, at the Monterey Bay Aquarium. You can also find general information about Jellyfish at National Geographic Kids.
  • Sharptail eel
    This eel was found when we were collecting Sargassum.

    Sharptail eel — It’s about half a meter in length and squirms all over. The scientist studying the Sargassum, has saved it in an aquarium so we can observe it. Its scientific name is Myrichthys breviceps.

  • Honey Bee — Believe it or not a honey bee joined us. There was no land in view and a honey bee landed on me. The wind must have blown the bee to sea and it was probably very happy to find a place to land that was not wet.
  • Porpoise — We also call these dolphins. Sometimes a pod of porpoises will get curious and  investigate our boat. They will circle us, swim along side and even ride our bow wave.

Jennifer Goldner: Still Learning! August 22, 2011

NOAA Teacher at Sea
Jennifer Goldner
Aboard NOAA Ship Oregon II
(NOAA Ship Tracker)
August 11 — August 24, 2011

Mission: Shark Longline Survey
Geographical Area: Southern Atlantic/Gulf of Mexico
Date: August 22, 2011

Weather Data from the Bridge
Latitude: 27.56 N
Longitude: 83.73 W
Wind Speed: 5.95 kts
Surface Water Temperature: 30.50 C
Air Temperature: 31.60 C
Relative Humidity: 66.00%

Science and Technology Log

Okay, so I admit, I can’t learn enough.  I just THOUGHT I was doing my last post, but I have to share with you some more information I learned toward the end of our journey.  So if you want to learn some “cool facts,” today’s post is for you!

Cool Fact #1:  Sargassum This is a type of seaweed we saw in the ocean today alongside the ship.  It mats together in large clumps and serves as a refuge for larval fish.  It also is a type of “floating community” with lots of fish, such as mahi mahi, congregating around it.  Newly hatched sea turtles find refuge in sargassum.

Sargassum off the starboard side of NOAA Ship Oregon II
Sargassum off the starboard side of NOAA Ship Oregon II
Sargassum- courtesy of bing images
Sargassum- courtesy of bing images
sargassum fish
Sargassum fish

Cool Fact #2:  Shark skin samples and fin clips — All week long I have seen shark skin samples and fin clips taken, but today I found out from two of the scientists on our survey, Dr. Trey Driggers and Adam Pollack, what is done with these.  The skin sample is done so the shark can be identified down to the species.  For example, there are 3 species of smooth dogfish in the Gulf of Mexico.  They all look the same externally.  Keep in mind, the smooth dogfish shares the same genus (Mustelus), but the species differs.  One of the ways to tell them apart is to look at their skin sample under a microscope.  For this reason, every shark that is caught has a small sample of skin taken that is placed in alcohol for preservation.

Fin clip
Fin clip

When it gets to the lab, the scientist looks at the dermal denticles (scales) under a microscope.  If the denticle has 1 point, its species is either canis (common name– smooth dogfish) or norrisi (common name–Florida smooth dogfish).  If it has 3 points, its species is sinusmexicanus (common name- Gulf smooth dogfish).

The fin clip is collected and archived and later a DNA analysis is performed.  They are compared to fish of the Gulf of Mexico to tell if they are genetically different or similar.  This information is used for stock management.

Cool Fact #3: Otoliths– I have been assisting the scientists this week in getting the otoliths from various fish, such as red grouper, yellowedge grouper, and blueline tilefish.  Today I got to take the otoliths out myself.  By “myself,” I mean with the help of skilled scientist, Adam!    It was neat!  So what are otoliths?  They are the ear bones of fish.  They tell the age of the fish, much like the annual rings of a tree trunk do.   These are collected and put in an envelope with the identification number in order to be observed under a microscope in the lab.

Removing the otoliths-  Thanks to Adam, Scientist, for teaching me how to do this!
Removing the otoliths- Thanks to Adam, Scientist, for teaching me how to do this!
Otoliths, courtesy of Google images
Otoliths, courtesy of Google images
Otoliths removed
Otoliths removed

Personal Log

Last night after our shift ended at midnight, by the light of the moon we watched a pod of about 25 dolphins chase flying fish and play in the wake of the boat.  I sure will miss all the sights the sea has to offer.  I will especially miss the people.

I mentioned in an earlier post that NOAA Ship Oregon II is like a city.  It has everything needed on board to run smoothly.  There are people with numerous kinds of backgrounds. Each and every one of these individuals is needed in order to successfully complete a NOAA mission, whatever it may be.

So now I’m talking to you kids.  Have you ever thought about what you want to be or do when you grow up?  How about starting now?  How about you adults, have you ever thought about trying to do something new and exciting?   I have a question for you (and I would like for you to put your answer in the poll):  If you could choose any job on this ship, what would it be?

If you will notice from my posts, I did not just cover the science end of this ship.  There are so many other careers going on to make these surveys work.  It’s a team effort.  Under the leadership of Cap Nelson, that’s exactly what you have here on NOAA Ship, Oregon II: a team effort.  And that’s what makes this ship a model for any team to follow.

Caitlin Fine: Flexibility! August 6, 2011

NOAA Teacher at Sea
Caitlin Fine
Aboard University of Miami Ship R/V Walton Smith
August 2 – 7, 2011

Mission: South Florida Bimonthly Regional Survey
Geographical Area: South Florida Coast and Gulf of Mexico
Date: August 6, 2011

Weather Data from the Bridge
Time: 4:24pm
Air Temperature: 31.6°C
Water Temperature: 32.6°C
Wind Direction: Southwest
Wind Speed:  4 knots
Seawave Height: calm
Visibility: good/unlimited
Clouds: partially cloudy (cumulous and cirrus clouds)
Barometer: 1013nb
Relative Humidity: 62%

Science and Technology Log

Many of you have written comments asking about the marine biology (animals and plants) that I have seen while on this cruise. Thank you for your posts – I love your questions! In today’s log, I will talk about the biology component of the research and about the animals that we have been finding and documenting.

We have another graduate student aboard, Lorin, who is collecting samples of sargassum (a type of seaweed).

Sargassum sample from Neuston net tow

There are two types of sargassum. One of those types usually floats at the top of the water and the other has root-like structures that help it attach to the bottom of the ocean.

Lorin is filtering a sample from the Neuston net in the web lab

We are using a net, called a Neuston net, to collect samples of sargassum that float. The Neuston net is towed alongside the ship at the surface at specific stations. This means that the ship drives in large circles for 30 minutes which can make for a rocky/dizzy ride – some of the chairs in the dry lab have wheels and they roll around the floor during the tow!

Towing the Neuston net along the side of the ship

Lorin and other researchers are interested in studying sargassum because it provides a rich habitat for zooplankton, small fish, crabs, worms, baby sea turtles, and marine birds. It is also a feeding ground for larger fish that many of you may have eaten, such as billfish, tuna, and mahi mahi.

Small crab that was living in the sargassum

The net not only collects sargassum, but also small fish, small crabs, jellyfish, other types of seaweed, and small plankton.

Small fish from the Neuston net

Plankton can be divided into two main categories: zooplankton and phytoplankton. As I  said in my last post, phytoplankton are mostly very small plants or single-celled organisms that photosynthesize (they make their own food) and are the base of the food chain. Zooplankton are one level up on the food chain from phytoplankton and most of them eat phytoplankton. Zooplankton include larva (babies) of starfish, lobster, crabs, and fish.

Small zooplankton viewed through the dissecting microscope

We also use a Plankton net to collect samples of plankton. This has a smaller mesh, so it collects organisms that are so small they would fall through the Neuston net. Scientists are interested in studying the zooplankton that we catch in the Plankton net to understand what larger organisms might one day grow-up and live in the habitats we are surveying. They study the phytoplankton from the Plankton net to see what types of phytoplankton are present in the water and in what quantities.

Washing off the Plankton net

Today we collected so many diatoms (which are a type of phytoplankton) in the Neuston net that we could not lift it out of the water! This tells us that there are a lot of nutrients in the water (a diatom bloom) – maybe even harmful levels. I am bringing some samples of the diatoms and zooplankton home with me so we can look at them under the microscopes at school!

Evidence of a diatom (phytoplankton) bloom in the Gulf of Mexico

The marine biologists on this cruise are mainly interested in looking at phytoplankton and zooplankton, but we also have seen some larger animals. I have seen many flying fish skim across the surface of the water as the boat moves along. I have also seen seagulls, dolphins, sea turtles, cormorants (skinny black seabirds with long necks), and lots of small fish.

Small flying fish from the Newston net

Personal Log

Working as an oceanographer definitely demands flexibility. I have already mentioned that we chased the Mississippi River water during our second day. After collecting samples, we had to find blue water (open ocean water) to have a control to compare our samples against.  We traveled south through the night until we were about 15 miles away from Cuba before finding blue water. All of this travel was in the opposite direction from our initial cruise plan, so we have had to extend our cruise by one day in order to visit all of the stations that we need to visit inside the Gulf of Mexico. This has meant waking-up the night shift so we can all change their airplane tickets and looking at maps to edit our cruise plan!

Changes to our cruise plan on the survey map

Many of you are writing comments about sharks – I have not seen any sharks and I will probably not see any. The chief scientist, Nelson, has worked on the ocean for about 33 years and he has sailed for more than 1,500 hours and he has only seen 3 sharks. They mostly live in the open ocean, not on the continental shelf where we are doing our survey. If there were a shark nearby, our ship is so big and loud that it would be scared away.

Playing with syringodium

Today I saw a group of about 4 dolphins off the side of the ship. They were pretty far away, so I could not take pictures. Their dorsal fins all seemed to exit the water at the same time – it was very beautiful. A member of the crew spotted a sea turtle off the bow (front) of the ship and I saw several different types of sea birds, especially seagulls.

Yesterday afternoon we passed through the Gulf of Mexico near the Everglades and there were storm clouds covering the coastline. The crew says that it rains a lot in this part of the Florida coast and that Florida receives more thunderstorms than any other state. It is strange to me because I always think of Florida as “the sunshine state.”

Grey sky and green water in the Gulf of Mexico

The color of the ocean has changed quite a lot during the cruise. The water is clear and light blue near Miami, clear and dark blue farther away from the coast in the Atlantic Ocean, cloudy and yellow-green in coastal Gulf of Mexico, and cloudy and turquoise in the Florida Bay. Scientists say that the cloudiness in coastal Gulf of Mexico is caused by chlorophyll and the cloudiness in the Florida Bay is caused by sediment.

It has been hot and sunny every day, but the wet lab (where we process the water samples and marine samples), the dry lab (where we work on our computers), the galley and the staterooms are nice and cool thanks to air conditioning! I can tell that I am getting used to being at sea because now when we are moving, I feel as though we are stopped. And when we do stop to take measurements, it feels strange.

Did you know?

NOAA does not own the R/V Walton Smith. It is University of Miami ship that costs NOAA from $12,000 to $15,000 a day to use!

Organisms seen today…

–       Many sea birds (especially seagulls)

–       2 cormorants (an elegant black sea bird)

–       10-12 dolphins

–       1 sea turtle

–       Lots of small fish

–       Lots of zooplankton and phytoplankton (especially diatoms)

–       Sargassum and sea grass