John Clark, September 25, 2013

NOAA Teacher at Sea John Clark

Aboard NOAA Ship Henry B. Bigelow

September 23 – October 4, 2013

The galley
The galley

Mission: Autumn Bottom Trawl Survey
Geographical Area of Cruise: North Atlantic
Date: September 25, 2013

Science and Technology  Log 

I was  told  that  the  first  12  hour night watch shift was the hardest for staving off sleep and those who spoke were right. Tonight’s  overnight shift seems to be flying by and I’m certainly awake. Lots of trawling and sorting this  evening with four sorts complete by 6am. One was just full of dogfish, the shark looking fish,  and  they  process  quickly  because  other  than  weight  and  length there is little request for other data. The dogfish were sorted at the bucket end of the job so determining sex had already been completed by the time the fish get to my workstation. Again I’m under the mentorship of Jakub who can process fish faster than I can print and place labels on the storage envelopes. The placement of the labels is my weakness as I have no fingernails and removing the paper backing from the sticky label is awkward and time consuming. Still tonight I’m showing speed improvement over last night. Well at least I’m getting the labels on straight most of the time.

Sorting fish
Sorting fish

In  addition  to  the  dogfish,  we  have  processed  large  quantities  of  skate  (the  one  that  looks  like a  sting  ray to me), left  eyed flounders, croakers (no relation to the frog), and sea robins of which there are two types, northern and stripe. The sea robins are  very colorful with the  array of spines just behind the  mouth. And yes it hurts when one of the spines goes through your glove. Sadly for me sorting has been less exciting tonight.  With  the big fish being grabbed off at the front of the line there has been little left for me to sort. I feel like the goal keeper in soccer  – just  don’t let them get past me. To my great surprise, so far I’ve experienced no real fear of touching the fish. The gloves are very nice to work with.

Species in specific buckets
Species in specific buckets

And let us not overlook the squid. There have been pulled in by the hundreds in the runs today. There are two types of squids, long fin (the lolligo) and short fin (the illex). What they both have in common is the ability to make an incredible mess. They are slimy on the outside and  inky on the inside. They remind me of a fishy candy bar with really big eyes. And  for all the fish  that enjoy their squid  treat the species  is,  of  course,  (wait  for  it) just  eye  candy.  The  stories  about  the  inking  are  really  true. When  upset, they give  off ink; lots of ink. And  they are very upset by the time they reach the data collection stations. If you could bottle their ink you would  never need  to  refill your pen  again. They are also  very, very  plentiful which  might explain  why there are no requests to collect additional data beyond  how long they are. I guess they are not eye candy to marine scientists. However, there vastness is also their virtue. As a food source for many larger species of marine life, an absence of large quantities of squid in our trawling nets would be a bad sign for the marine ecosystem below us.

Safety equipment
Safety equipment

When the squid are missing, our friend the Skate (which of  the four  types does not  matter)  is glad to pick up  the slack on  the “messy to work with” front. As this species makes it down the sorting and data collecting line the internal panic button goes  off and they exude this thick, slimy substance  that covers their bodies and makes them very slippery customers at  the weigh stations.  It turns out the small spines on the tails were placed there so that fisheries researchers could have a fighting chance to handle them without dropping. Still, a skate sliding onto the floor is a frequent event and provides comic relief for all working at the data collection stations.

Clark Log 2There was new species in the  nets tonight, the  Coronet fish which looks like  along  drink straw with stripes  and a string attached to the back end. It is  pencil thick and about a foot long without the string. We only caught it twice during the trip. The rest of the hauls replicate past  sorting as dogfish, robins, skates, squid, croakers, and flounder are the bulk of the catch. I’ve been told that the diversity and size of the trawl should  be more abundant as we steam along the coastline heading north  from the lower coast of  New Jersey. Our last trawl of the shift, the nets deployed collect two species new for our voyage, but ones I actually recognized despite my limited knowledge of fish – the Horseshoe Crab and a lobster! I grew up seeing those on the Jersey shore.  We only got one lobster and after measuring  it we let  go  back  to  grow  some  more.  It  only  weighed in at less than two pounds.

Personal Log 

The foul weather suit we wear to work the line does not leave the staging room where they are stored as wearing them around the ship is not  allowed. After  watching others, I have mastered the art  of  pushing the wader pants over the rubber boots and  thus leaving them set-‐up  for quick donning and  removal of  gear  throughout  the shift.

While the work is very interesting on board, the highlight of each  day is meal time. Even though I work the night  shift (which ends at  noon) I take a nap right after my shift so I can  be  up  and  alert in  time  for dinner. My favorite has been  the T-‐bone steaks with Monterey seasoning and  any of the fish cooked up from our trawling like scallops or flounder. The chef, Dennis, and his assistant, Jeremy serve up some really fine cuisine. Not fancy but very tasty. There is a new soup every day at  lunch and so far my favorite has been the cream of tomato. I went back for seconds! Of course, breakfast is the meal all of us on the night watch  look forward  to  as there is no  meal service between midnight and  7am. After 7 hours of just snacking and  coffee, we are ready for  some solid food by the time breakfast  is served.

Seas continue to be  very calm and the  weather sunny and pleasant. That’s quite a surprise for the North Atlantic in the fall. And  the sunrise today was amazing. The Executive Officer, Chad Cary, shared that the weather we are experiencing should continue for at least four more days. I am  grateful  for  the  calm weather – less  chance  to  experience  sea  sickness.  That is something I’m determined to avoid if possible.

John Clark, Hi Ho, Hi Ho It’s Off to Work We Go, September 24, 2013

NOAA Teacher at Sea
John Clark
Aboard NOAA Ship Henry B. Bigelow
September 23 – October 4, 2013

Mission: Autumn Bottom Trawl Survey
Geographical Area of Cruise: North Atlantic
Date: September 24, 2013

Survival suits!
Survival suits!

Science and Technology  Log 

Today is my first full 12 hour shift day. I’m on the night crew working midnight to noon. Since we left port yesterday I’ve been  trying to  adjust my internal clock for pulling daily “all night”ers.  On Monday, after we  left port, safety briefs for all hands occurred once we made it out to sea and I got to complete my initiation into the Teacher at Sea alumni program  – the donning of  the Gumby suit as I call it. It is actually a bright red wet suit that covers your entire body and makes you look like a TV Claymation figure from the old TV show. In actuality it is designed to help you survive if  you need to abandon ship. Pictures are  of course taken to preserve this rite of passage.

The Henry B. Bigelow is a specially-built NOAA vessel designed to conduct fisheries research at sea.  Its purpose is to collect data that will help scientists assess the health of the Northern Coastal Atlantic Ocean and the fish populations that inhabit it. The work is invaluable to the commercial fishing industry.

The Bigelow in port
The Bigelow in port

Yesterday, I learned how we will go about collecting fisheries data. Our Chief Scientist, Dr. Peter Chase, has selected  locations for sampling the local fish population and the ship officers have developed a sailing plan that will enable the ship to visit all those locations, weather permitting, during the course of the voyage. To me its sounds like a well-‐planned  game of connecting the dots. At each target location, a trawling net  will be deployed and dragged near the bottom of the sea for a 20 minute period at a speed of 3 knots. Hence the reason  this voyage is identified as a bottom trawl survey mission. To drag the bottom without damaging the nets is not easy and there are five spare nets on board in case something goes wrong. To minimize the chance of damaging the net during a tow, the survey technicians use the wide beam sonar equipment to survey the bottom prior to deployment. Their goal is to identify a smooth path for the net to follow. The fish collected in the net are sorted and studied, based on selected criteria, once on board. A  specially designed transport system moves the fish from the net to the sorting and data collection stations inside the wet lab. I’m very excited to see how it actually works during my upcoming shift.

The big net.
The big net.

Work is already underway when our night crew checks in. The ship runs 24/7  and the nets have been down  and trawling since 7pm. Fish sorting and data collection  are  already underway.  I don my foul  weather gear which  looks  like a set of waders used for British fly fishing.  There is also a top jacket  but the weather is pleasant  tonight and the layer is not needed. I just need to sport some gloves and get to work. I’m involved with processing  two trawls of fish right away. I’m assigned to work with an experienced member of the science team, Jakub. We will be collecting information on the species of fish caught on each trawl.  Jakub carries out the role as cutter, collecting the physical  information or fish parts needed by the scientists. My role is recorder and  I enter data about the particular fish  being evaluated  as well package up  and  store the parts of the fish  being retained  for future study.

Ship equipment
Ship equipment

Data collection on each fish harvest is a very detailed. Fish are sorted by species as they come down the moving sorting line where they arrive after coming up the conveyer belt system from the “dump”  tank, so  named  because that is where the full nets deposit their  bounty. Everybody on the line sorts fish. Big fish get  pulled off  first  by the experienced scientists at  the start  of  belt  and then volunteers such as I pull off the smaller fish. Each  fish  is placed  into  a bucket by type of fish. There are three types of buckets and each bucket has a  bar code  tag. The  big laundry  looking  baskets  hold  the  big  fish,  five  gallon  paint buckets hold  the smaller fish, and  one gallon  buckets (placed  above the sorting line) hold  the unexpected  or small species. On  each  run  there is generally one fish  that is not sorted  and  goes all the way to the end untouched and unceremoniously ends up in the catch-‐all container at the  end of the  line. The watch leader weighs the buckets and then links the bar code on the bucket to the type of fish in it. From there  the  buckets are  ready for data  collection.

Clark Log 1d
The sorting line

After sorting the fish, individual data collection begins “by the bucket” where simultaneously at three different stations the sizing, weighing, and computer requested activities  occur. By  random sample certain work  is  performed on that fish. It  gets weighed and usually opened up to retrieve something from inside the fish. Today, I’ve observed several types of  data collection. Frequently requested are removal of  the otolith, two small bones in the head that  are used to help determine the age of  the fish. For bigger fish with vertebra,  such  as  the  goose  fish,  there  are periodic  requests  to  remove a  part  of  the backbone and  ship  it off for testing. Determining sex is recorded  for many computer tagged  fish  and  several are checked stomach contents.

Of the tools used to record data from the fish, the magic magnetized measuring system is the neatest. It’s  rapid  fire  data  collecting  at  its  finest.  The  fish  goes  flat  on  the measuring  board;  head  at  the  zero point, and  then a quick touch  with  a magnetized block at the end  of the fish  records the length  and  weight. Sadly, it marks the end of tall tales about the big  one that got  away and keeps getting bigger as the story is retold. The length of  the specimen is accurately recorded for  posterity in an instant.

 

clark 1e

Personal Log

Flying into Providence  over the  end of Long Island and the  New England coast line  is breath taking. A jagged,  sandy  coast  line  dotted  with  summer  homes  just  beyond  the  sand dunes. To line  up  for  final  approach we  fly right over Newport where  the  Henry B. Bigelow is berthed at the  Navy base  there. However, I  am  not  able  to  spot  the  NOAA  fisheries  vessel that  will be my home for the next two weeks from the air.Clark Log 4b

I arrive a day prior  to sailing so I have half a day to see the sites of Newport, Rhode Island  and  I know exactly where  I’m headed – the Tennis Hall of  Fame. My father was a first class tennis player who invested  many  hours  attempting  to  teach  his  son  the  game.  Despite  the  passion in  our  home  for  the great sport we  never made  it to the  Tennis Hall of Fame in Newport. Today I fulfilled that bucket  list  goal. I still remember being  court side  as a  young boy at The  Philadelphia  Indoor Championship watching the likes of  Charlie Pasarell, Arthur  Ashe, and Pancho Gonzales playing  on the canvas tennis court that was stretched out over the basketball arena. Also  in  the museum, to  my surprise, was a picture of the grass court lawn of the  Germantown Cricket Club from its days as a USTA championship venue. I  grew up playing on  those  grass tennis courts as my father  belonged to that  club. After seeing that picture, I left the museum knowing my father  got  as much out  of  the visit  as I did.

Ruth Meadows, July 11, 2009

NOAA Teacher at Sea
Ruth S. Meadows
Onboard NOAA Ship Henry B. Bigelow 
June 12 – July 18, 2009 

Mission: Census of Marine Life (MAR-Eco)
Geographical Area: Mid- Atlantic Ridge; Charlie- Gibbs Fracture Zone
Date: July 11, 2009

Waiting to see what animals we can spot off the bow
Waiting to see what animals we can spot off the bow

Weather Data from the Bridge 
Temperature 18o C
Humidity 61%
Wind speed 4.2 knots

Science and Technology Log 

Today is our last day at sea and the weather is certainly cooperating with us. We have beautiful blue skies, warm temperatures and calm waters.  It is a perfect day for observing marine life.  Several of us spent most of the day on the bow of the ship looking for any type of marine life.  Throughout the day, we spotted three Mola mola fish, which is a very large ocean sunfish that can be found in temperate oceans.

A humpback whale breaches the water off the bow of the Bigelow.
A humpback whale breaches off the bow.

One went right by the ship so we were able to see the entire body of this fish through the water.  Another one was just lying on its side but we were too far away to see it very well. Finally it was suppertime and we all went to the galley eat, somewhat disappointed that we had not seen more sea life. During supper, the call we had all been hoping to hear came, “Humpback whale off the bow.”  We all left the galley and quickly ran up to the deck afraid we would miss seeing this majestic creature.  We were in for a treat.  It was as if the whale knew we were watching and performed for us.  For over 40 minutes, the humpback whale slapped its pectoral fins, slapped its tail and even breached out of the water twice.  It was an amazing sight.

The fluke of the humpback
The fluke of the humpback

As the whale slowly swam around, the ship carefully followed at a safe distance giving us an amazing opportunity to observe this massive mammal in its natural habitat. At one point, the whale was floating on its back and slapping both of its pectoral fins in the water at the same time.  We were close enough to actually hear the sound of the fins hitting the water.  Many members of the ship’s crew came to the bow to watch also. While we were watching, the chief engineer standing next to me looked down at the water next to the ship in time to point out a Mako shark swimming just below the surface moving slowly toward the rear of the ship. The afternoon turned into an amazing good bye present to the entire crew of the Bigelow. After the humpback whale made its final dive deep into the ocean, many of us stayed outside to enjoy our last sunset over the Atlantic Ocean.

Personal Log 

The past four weeks on board the NOAA ship, Henry B. Bigelow, have been an amazing experience for me.  We traveled over 5,000 nautical miles to search for rare and unusual animals that live in the deep ocean along the Charlie-Gibbs Fracture Zone in the Mid-Atlantic Ridge.  I was truly fortunate to have been selected for this particular scientific cruise.  The scientific crew, NOAA corps and crew were second to none. Everyone worked around the clock to make sure the goals of the cruise were accomplished.  In addition to the professionalism of all the members of this cruise, everyone seemed to truly enjoy working together to complete all parts of the mission. Everyone, from the captain of the ship, the engineers, the deck hands, the cooks and the scientific crew, made me feel welcome and included in all the activities on board. I will take many things with me from this opportunity I was lucky enough to be selected for.

A beautiful sunset on the Atlantic
A beautiful sunset on the Atlantic

I knew I would learn a lot about the ocean and the organisms that live there.  What I didn’t know before I left was how much I would enjoy getting to know the people that were a part of the MAR-ECO cruise. Thank you for allowing me to be a small part of this wonderful experience.

Ruth Meadows, July 9, 2009

NOAA Teacher at Sea
Ruth S. Meadows
Onboard NOAA Ship Henry B. Bigelow 
June 12 – July 18, 2009 

Mission: Census of Marine Life (MAR-Eco)
Geographical Area: Mid- Atlantic Ridge; Charlie- Gibbs Fracture Zone
Date: July 9, 2009

Venda, Shannon and Amy cleaning the baskets.
Venda, Shannon and Amy cleaning the baskets.

Weather Data from the Bridge 
Temperature: 14.2o C
Humidity: 61%
Wind: 6.5 kts

Scientific and Technology Log 

One of the last things to be completed before arriving in Newport, Rhode Island is a final clean up of the lab. Once all the sampling is finished it is important to leave all the equipment used in good shape for the next cruise. Everyone from both watches worked together to get everything clean. The baskets and trays that were used to hold the samples were scrubbed down and rinsed off. Luckily, the day was beautiful for working outside.

Shannon and I help Tom clean his suit.
Shannon and I help Tom clean his suit.

While some of us cleaned the baskets, others rinsed them off and then placed them in the sun to dry.  Once they were dry, then they were returned to the correct location for storage. Once the baskets were cleaned the next step was to clean our foul weather gear.  These overalls and jackets had been used while collecting samples and they had all types of “dirt” on them, from “fish guts” to grease from the cables.  The easiest way to clean them was to scrub them while you had them on.  Someone would help make sure the back was clean and then someone would spray them with clean water.  It was simple, effective and fun all at the same time.

The serving line.
The serving line.

Personal Log 

Mealtime is a very important time aboard the ship.  Not only do we eat a variety of foods, but it is also a time when both the scientific crew and the working crew get a chance to talk and visit with each other.  The galley is a large open room with tables bolted to the floor to keep them from moving.  Some tables are for four people and others are for eight.  Each day the menu is posted before the food line and you may select what you want and how much.  There are usually two entrées (main dishes) and several side dishes to go along with them.  In addition, there is a fruit and salad bar that you can select. At the end of the cruise, you notice that some of the menu that some of the menu items have changed – we are out of lettuce and ketchup. We have been at sea for four weeks and some things just can’t be kept fresh that long. We still have apples, oranges, nectarines and ice cream!

The mess hall
The mess hall 

Ruth Meadows, July 7, 2009

NOAA Teacher at Sea
Ruth S. Meadows
Onboard NOAA Ship Henry B. Bigelow 
June 12 – July 18, 2009 

Mission: Census of Marine Life (MAR-Eco)
Geographical Area: Mid- Atlantic Ridge; Charlie- Gibbs Fracture Zone
Date: July 7, 2009

Tom Letessier holds a sea urchin fully inflated with water.
Tom Letessier holds a sea urchin still fully inflated.

Weather Data from the Bridge 
Temperature: 8o C
Humidity: 91%
Wind: 9.75 kts

Science and Technology Log 

Usually by the time the catch was on board, the sea urchins were deflated and very flat. These are commonly known as collapsible or flat urchins. When it is taken out of the water, it collapses into a flat shape. There is a red shrimp on the right side. We caught many different sizes of the Bathysaurus during the benthic trawls.  It has a very bony head, large mouth and lots of sharp teeth.  It normally rests stationary on the bottom of the ocean floor with its head slightly elevated.  It feeds primarily on fishes and decapods (type of crustacean).

Lizardfish
Lizardfish
A deep sea crab, Neolithodes grimaldii, was found in two different benthic catches. Its spines are very long and sharp. They were both in remarkably good physical shape and were carefully preserved so their spines would not break.
A deep sea crab, Neolithodes grimaldii, was found in two different benthic catches. Its spines are long and sharp. They were in remarkably good shape and were carefully preserved so their spines would not break.

We are finished with our trawls and are heading back to Newport, Rhode Island.  The trip back will take about 7 days.  During this time, the information that was entered into the computers will be analyzed and checked for any errors. In addition, the organisms that are preserved will be sorted and packaged for delivery to various locations.  Many of the samples will be going to the Virginia Institute of Marine Science (VIMS) and later distributed to various scientists to use in their research. Dr. Tracey Sutton will even send some specimens to me in Opelika for my students to observe.

Personal Log 

Occasionally, when the weather and work schedule allows, the deck chairs come out and we relax and visit with one another outside.  The crew calls this “The Stinky Sailor”. There will be soft drinks, slushy type drinks, sometimes candy and if we are lucky Andrew entertains us with his music. This part of the ship is called the O2 deck, two floors up from the main deck.  The Stinky Sailor is set behind the superstructure of the ship so it is protected from the wind.  When we were sailing east, the afternoon sun would warm the area making it a very pleasant place to visit and relax. 

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