Heather Haberman: Gulf Water Health, July 12, 2011 (post #4)

  • NOAA Teacher at Sea
    Heather Haberman

    Onboard NOAA Ship Oregon II
    July 5 — 17, 2011

Mission:  Groundfish Survey
Geographical Location:  Northern Gulf of Mexico
Date:  Tuesday, July 11, 2011

Weather Data from  NOAA Ship Tracker
Air Temperature: 29.5 C   (85.1 F)
Water Temperature: 29.8 C  (85.6 F)
Relative Humidity: 76%
Wind Speed: 2.09 knots

Preface:  Scroll down the page if you would like to read my blog in chronological order.  If you have any questions leave them for me at the end of the post.

Question of the Day:  Are you seeing any oil rigs on your trip?

Answer:   There are so many oil rigs out here in the Gulf of Mexico that I can’t recall a time when I couldn’t see one.  Some are small and some are enormous.  I never realized that there were so many different engineering designs for oil rigs.  At night they are all lit up and it looks like a city in the sea out here.  All of the bright lights do pose some problems for migrating birds especially during bad weather when the are attracted to the lights.  The birds will often circle the lights to exhaustion or hit the structure so hard that it kills them.

Science and Technology Log

Topic of the Day:  How do researchers determine the health of the Gulf waters?

Science and Technology log:

You wake up in the morning and you don’t feel well.  What do you do?  Some people may stick a thermometer in their mouth to see if they have a fever.  Body temperature is a good indicator of illness or infection.  If you still don’t feel well after a few days you could visit a doctor who may check your eyes, ears, throat, blood pressure, etc.   Doctors can often figure out what’s making you sick by using certain tools and running tests.  Researchers do the same thing with the ocean.  In order to see how “healthy” the ocean is, measurements need to be taken.  Can you tell which trawl was from healthy water and which was from “sick” water?

0.5 kg (1.1 lbs) is all we got from this 30 minute trawl
Over 500 kg (1,100 lbs) of fish were collected in this 30 minute trawl.

Why aren’t we seeing a lot of marine life in certain parts of the Gulf of Mexico?  You don’t have to be a doctor to answer this question, but you do have to have some scientific tools to diagnose the problem.

On the Oregon II, a device called a CTD is used to take measurements such as conductivity (salinity), temperature, chlorophyll concentration, and dissolved oxygen (DO).  These water quality measurements let researches know what’s happening in the water just like a doctor would look at your test results to gage your health status.  Sometimes a doctor may need to do a second test just to confirm the results.  NOAA’s fisheries biologists do the same thing with their water quality assessments.  Winkler titrations and a hand-held Hack Dissolved Oxygen meter are used to confirm the dissolved oxygen readings from the CTD.  Scientists need to make sure the data they collect is accurate and the more tests they perform the better their data will be.

This large piece of equipment is a CTD sensor. The top portion of the machine contains three gray vertical cylinders which are used to collect water samples. Under the machine are sensors that test the water quality while it is submerged. Here I am washing out the sensors once it was brought back on board from a test.
When comparing data from this device to our trawl samples, it’s obvious that water with low levels of dissolved oxygen can not support much life.

Dissolved Oxygen: Marine animals need oxygen to survive just like land animals do.  The main difference is that most marine animals have gills which are able to diffuse oxygen molecules from the water directly into their blood.  Diffusion is the process of a molecule moving from an area of high concentration to low concentration.

Have you ever sprayed air freshener and noticed how the smell moves from where you sprayed it (high concentration) throughout the entire room (low concentration) until the smell is equally distributed throughout the room (equilibrium)?  That’s how diffusion works.

It’s very important to understand that the amount of dissolved oxygen MUST be higher in the water then inside of the animal’s body or diffusion of oxygen into the blood won’t take place.  This means the animals will either have to move or die.  This is what’s happening in the “Dead Zone” in the Gulf of Mexico.

The reason levels of oxygen are so low in the Gulf of Mexico are due in part to human actions.  The overuse of fertilizers that are high in nitrates and phosphates are one of the major problems.  When it rains or floods, these extra nutrients wash off of our lawns and into storm drains which then drain into the rivers.  Most of the Mississippi watershed consists of agricultural land in the breadbasket of the Midwest where a lot of fertilization takes place during the spring and summer months. All of the nutrients from the rivers in the Mississippi watershed eventually empty out into the Gulf of Mexico.

Mississippi Watershed: The area of land that drains into the Mississippi River and out into the Gulf of Mexico.

These nutrients help the aquatic plants grow, just as they helped our lawns and crops grow.  Now you may be thinking “In the last blog you talked about how important aquatic plants are when it comes to oxygen production.”  Indeed they do make oxygen, but as all of these plants die and sink to the bottom of the sea, bacteria feed on (decompose) their remains and use up the available oxygen in the process.  More oxygen is consumed by these aerobic bacteria than was made by the plants which is why oxygen levels can get so low.

Hypoxia is the term used when dissolved oxygen is below 2 mg/l or 2 parts per million.  That means for every one million molecules, only two of them are oxygen molecules.  Most marine life try to avoid water that’s this low in oxygen because they will become stressed or die.  The hypoxic zone in the Gulf occurs in one of the most important commercial fishery zones in the United States during the spring and summer months.  Why during the spring and summer?  There are a couple of answers to this question.  One is because of the fertilizer runoff which I mentioned earlier.  The other has to do with water temperature.

As water temperature increases, it naturally looses it's ability to hold gas molecules like oxygen. Cooler water naturally holds more oxygen. Source: Koi Club of San Diego
This is a map of the data we have been collecting during the Groundfish Survey. Our data gets sent in everyday and the maps are updated weekly. Check back at http://www.ncddc.noaa.gov/hypoxia/products/ for a complete map of Bottom Dissolved Oxygen after July 17th 2011.

When the data collection is complete you will notice that the “dead zone” is larger than the state of New Jersey.  It is bigger this year than in previous years due to the flooding that’s occurred in the Great Plains and Midwest this spring and summer.

Salinity (salt level):  This measurement is extremely important to the fish that live in the ocean because each species has an optimal salinity level that it requires.  Remember osmosis?  Osmosis is how cells move water in or out depending upon their environment.  If a fish ends up in an environment that’s too saline (salty), the water will begin to leave the cells of the fish through osmosis and they could “dehydrate”.  If they are in water that’s too fresh, then their cells will start to fill with water and they could “bloat”.  All of this cellular work is done by the body in order to maintain homeostasis.  Homeostasis refers to the ability of a living thing to keep its body in balance with the ever-changing environment in which it lives.

Salinity also affects the levels of dissolved oxygen in the water.  The saltier the water, the lower the oxygen levels will be.  It also creates a problem with waters ability to “mix”.

Notice how the heavier salt water settles to the bottom of the sea. The red dots represent the amount of dissolved oxygen during a hypoxia event. Notice that due to a lack of water mixing, the concentration of oxygen is much lower in the saltier bottom layer of water.

Chlorophyll Concentrations:  As the last blog mentioned, chlorophyll is a green pigment that phytoplankton and other aquatic plants have.  By calculating the concentration of chlorophyll in an a region, researchers can determine how productive the area may be for fishing.  Remember that zooplankton eat phytoplankton and bigger fish eat zooplankton, which are then eaten by bigger fish. A good general rule of thumb is that if the water is clear and blue then there won’t be as much living in it as green cloudy (turbid) water. Areas of hypoxia can also be predicted if the levels of chlorophyll get too high.

Now that you know some of the basics about ocean health, try to do your part.

*   If you must use fertilizer, do so sparingly.

*  Purchase soaps and detergents that are labeled phosphate free.

*  Be sure to make sustainable choices when purchasing seafood (visit Seafood Watch)

Personal Log

Today I found out why fishermen do not like dolphins.  A pod of dolphins were following us on a trawl and when we brought up the catch there were holes in the net.  We had to dump the sample back into the sea and try again after the holes were patched.  We went back to do a second trawl in the same area and the dolphins did the same thing.  We decided to try to “outrun” the dolphins on our way to the next station.

The reason we can’t collect data on the trawls with net holes is because we won’t get an accurate representation of the actual number of species living in that area.  In science it’s very important to make sure we collect good data.

A pod of dolphins following our ship.

Kimberly Lewis, July 13, 2010

NOAA Teacher at Sea Kimberly Lewis
NOAA Ship: Oregon II
July 1 -July  16 2010

Mission: SEAMAP Summer Groundfish Survey
Geographical Area of Cruise: Gulf of Mexico
Date: Sunday, July 13, 2010

Ecosystem Conservation and some of the people who monitor it

Me holding a skate.
Me holding a skate.

Weather Data from the Bridge 
Time: 1130 (11:30 AM)
Position: Latitude = 28.57.59 N;
Longitude = 94.49.73 W
Present Weather: Clear
Visibility: 8-10 nautical miles
Wind Speed: 14.97 knots
Wave Height: 4 feet
Sea Water Temp: 29.1 C
Air Temperature: Dry bulb = 31.4 C; Wet bulb = 27.0 C
Barometric Pressure: 1013.77 mb

Science and Technology Log

“IT’S ALL CONNECTED.” Everything in an ecosystem is connected to everything else. This is a guiding principle of studying and managing ecosystems. This past spring in one of my online communities we were discussing whole ecosystem monitoring for conservation rather than the traditional ‘save one species at a time”.

I’m seeing it now in the Gulf of Mexico. Obviously, the ocean environment is connected to human activities – the BP-Deepwater Horizon oil spill makes that abundantly clear. But there are also countless natural connections, and much less obvious human impacts, that must be understood and assessed if the Gulf ecosystem is to be protected. Commercial fish and shrimp stocks can only be sustained through a careful understanding of the human impact and natural connections in the Gulf.

That’s why we identify and count every organism we bring up in a trawl. Sometimes we get 50 or more different species in one catch, and we don’t just count the commercially important ones like red snapper and shrimp. We count the catfish, eel, sea stars, sea squirts and even jellyfish we haul in. Why? Because even though these organisms might seem “unimportant” to us, they might be important to the red snapper and shrimp. They also might be important to the organisms the red snapper and shrimp depend on. And even if they’re not directly important, studying them might tell us important things about the health of the Gulf.

Brittany
Brittany on the deck

Bruce and I are learning a lot about this from the incredibly knowledgeable marine biologists in the science party. Brittany Palm is a Research Fishery Biologist from NOAA’s Southeast Fishery Science Center (SEFSC) in Pascagoula, MS, and leader of the day watch on this leg of the Oregon II’s Summer Groundfish Survey. Brittany is working on her M.S. on a fish called croaker, Micropogonias undulatus, studying its stomach contents to better understand its position in the food web. Croaker is not an economically important species, but it lives in the same shallow sea floor habitat as shrimp so shrimpers end up hauling in a huge amount of croaker as bycatch. So, when the shrimping industry declined in 2003-2004, the croaker population exploded. Since croaker are closely associated with shrimp habitat and the shrimp fishery, we might gain important insights by studying croaker population and understanding what they eat, and what eats them.

Alonzo
Alonzo helping to dissect a fish

Alonzo Hamilton is another NOAA Fishery Biologist from the SEFSC. Alonzo explained that there’s a lot to be learned by looking at the whole ecosystem, not just the 23 commercial species that are managed in the Gulf. For example, many of the crabs we commonly catch in our trawls are in the genus Portunas, known as “swimming crabs.”

Portunas spinicarpus
Portunas spinicarpus

Portunas species normally live on the sea floor, but when severe hypoxia sets in, Portunas crabs can be found at the surface, trying to escape the more severe oxygen depletion that typically takes place at the bottom of the water column.

Sean
Sean on the deck
Geoff on the deck
Geoff on the deck

Sean Lucey and Geoff Schook are Research Fishery Biologists from NOAA’s Northeast Fishery Science Center in Woods Hole, Massachusetts. They are working on the Oregon II right now to support the SEFSC because of huge manpower effort demanded by the oil spill. The NEFSC has been conducting their groundfish survey annually since 1963, making it the longest-running study of its kind. Originally the survey only looked at groundfish population, but as our understanding of ecosystem dynamics increased over time, more and more factors were analyzed. Now NEFSC looks at sex, age, stomach contents and many other species besides groundfish to obtain a more complete picture of the food web and the abiotic factors that affect groundfish. NEFSC even measures primary production in the marine ecosystem as one tool to estimate the potential biomass of groundfish and other species at higher trophic levels.

Fisheries biologist Andre DeBose
Andre DeBose is a NOAA Fishery Biologist from the SEFSC and the Field Party Chief for the Summer Groundfish Survey. In addition to leading the science team on the Oregon II, Andre is conducting research on Rough Scad, Trachurus lathami, an important food species for red snapper and important bait fish for red snapper fisherman. By gaining a better understanding of the relationship between Red Snapper and its prey we can better understand, and better manage, the ecosystem as a whole.

There’s a lot of information to be learned beyond just counting fish. By taking a wide look at the marine environment we can better understand how the whole ecosystem functions. This enables us not only to be more informed in setting sustainable catch levels, but also enables us to identify and respond to things that contribute to hypoxia and other problems that degrade habitat and reduce populations. It’s all connected.

Personal Log

Everyone in the scientific party has been working very hard to gather data. A 12 hour shift can be long at times, and other times fly by. Today Andre told us we will start cleaning up Thursday morning. It doesn’t seem possible that my 17 days with the Oregon II will soon be over. Part of me is excited to get back home to see my family and sleep in a bed that isn’t affected by the Gulf waves. The other part of me is sad due to the fact I will not longer be working with some remarkable people and worked with ongoing scientific research. It is very hard work, but very exciting to see what goes on at sea. I am sure I will call on some of them in the future for collaboration.

Chef Walter made some great meals over the past few days. Crab cakes, roasted buffalo, chicken curry, and quail, not to mention those great breakfasts. Based on my first two days of sea not able to keep anything down and not wanting to eat, I thought for sure I would go back to Ohio 15 pounds lighter. But the sea sickness wore off and I am enjoying food and adjusting to boat life.

Mechelle Shoemake, June 29, 2010

NOAA Teacher at Sea
Mechelle Shoemake
Onboard NOAA Ship Oregon II
June 19 – 30, 2010

Mission: SEAMAP Groundfish Survey
Geographical Area of Cruise: Northwestern Gulf of Mexico
Date: Tuesday, June 29, 2010

Weather Data from the Bridge
Time: 0000 hours (12:00pm)
Position: Latitude = 28.45.067 N; Longitude = 091.35.189 W
Present Weather: cloudy
Visibility: 6 nautical miles
Wind Speed: 8 knots
Wave Height: 4-6 foot swells
Sea Water Temp: 29.8 degrees Celsius
Air Temperature: Dry bulb = 27.3 degrees Celsius;
Wet bulb = 26.2 degrees Celsius

Science and Technology Log

The Groundfish Survey’s purpose is to find out what species are here in the Gulf how many, and their size, sex, and maturity status. On average the trawl produces at least 20-40 different species on each tow. The type of trawl used on the Oregon II is the Bottom Otter Trawl. The deck hands put the net out, it trawls for around 30 minutes, and it is then pulled back in by the deck hands. The catch is then placed in basket where it is weighed and then separated by species Each species is then individually weighed, measured, and sexed.

This is a red snapper I’m sorting out of the catch

We caught a nice red snapper that will be sent back to the lab for testing. It will also be determined if the oil spill had any effect on the fish, shrimp, crabs, and other species we caught. We also took some more water samples using the CTD to determine how much oil is in the water. We We used the Neuston net and the Bongo nets to gather plankton, which is also being collected for testing. The Neuston gathers plankton on the surface while the Bongo nets gather plankton all the way from the bottom of the gulf to the surface. This plankton is then placed inglass jars with a preservative Twenty-four hours later the plankton is transferred to a lesser preservative. The initial set sample is too strong for long storage. The plankton samples are then sent to Poland to a specialized plankton lab. In this lab, the plankton is identified to the family level. It is then sent back to the NOAA labs where it is identified to the species level. It was amazing to see all the little critters in the jar. There were so many of them.

Deploying the bongo net

Later in the day, we did another trawl….the catch of the day. Well it was a tire! It did have two little critters living in it, though. They were both identified and weighed and then frozen and packaged for the lab. The speculated reason for the trawl producing so few specis what’s called hypoxia. Hypoxia is the depletion of the oxygen in the water. If there is no oxygen,the fish and many other species cannot live. You can read more about hypoxia at http://www.ncddc.gov.

A frog fish

To the right is a frog fish that we found living in the tire. It has a trick to catch its food. The tentacle on the top of the head acts as a lure to attracts its prey. When a smaller fish comes by to eat what it thinks is food at the end of the frog fish’s lure…..well it gets caught and the frog fish eats the little fish. This frog fish still had its dinner in its mouth.

To the left is a picture of the last trawl that my shift made. You can see that this catch was full of shrimp and little crabs. We had to turn back towards Texas due to Tropical Storm Alex, which is forecasted by NOAA’s National Weather Service to become a hurricane by tomorrow. It’s too dangerous for the ship to be out in weather like that.

Some of the critters from out last trawl

Personal Log

Well, I can say that this has definitely been an adventure of a lifetime. I have enjoyed my voyage with all of my new NOAA friends. They have taught me a lot. As I am writing this, we are sailing back to port in Galveston, TX. As I said earlier, we had to cut our trip short due to Tropical Storm Alex. Believe me, I know he is out there. Our ship is rolling with the waves. I had a quick lesson in securing my belongings. You never know what you might encounter when you go to sea. Thanks to NOAA for giving me this opportunity.

Mandi Gillespie, July 6, 2007

NOAA Teacher at Sea
Mandi Gillespie
Onboard NOAA Ship Oregon II
July 5 – 7, 2007

Mission: Summer Groundfish Survey
Geographical Area: Gulf of Mexico
Date: July 7, 2007

NOAA ship OREGON II at port waiting to set sail.
NOAA ship OREGON II at port waiting to set sail.

Weather Data from Bridge 
Visibility: n/a
Wind direction:243
Wind speed: 6.7 kts
Sea wave height n/a
Swell wave height: n/a
Seawater temperature: 26.8 C
Sea level pressure: 1016 mb
Cloud cover: n/a

Science and Technology Log 

This cruise’s mission is two fold: 1) stock assessment of fish and invertebrates and 2) mapping of the hypoxia zone. To assess the fish and invertebrate stock, a 40-foot bottom trawl net collects bottom samples from designated sites. The samples are gathered, identified, measured and weighed by the scientists on board the ship. Data collected is eventually used to set bag limits for fish and shrimp. To measure the hypoxic zone, equipment is deployed from the ship at specific sites. Dissolved oxygen level is collected. This data is used to map the Gulf of Mexico’s hypoxic zone.

Personal Log 

I arrived onboard the OREGON II on July 4th eager to set sail. However, we have been delayed because the auxiliary emergency generator onboard will not start. Once the generator functions properly, we will be able to set sail.

My position title is watch stander and am told training for my position is “on the job”. I am scheduled on the day shift which is 12:00 to 24:00. I look forward to fulfilling my duties as a watch stander to better understand how the samples are collected and processed.

Question of the Day 

What is a hypoxic zone?