NOAA Teacher at Sea Log:Deborah Moraga NOAA Ship: Fulmar Date: July 20‐28, 2010
Mission: ACCESS (Applied California Current Ecosystem Studies) Geographical area of cruise: Cordell Bank, Gulf of the Farallones and Monterey Bay National Marine Sanctuaries
Date: June 23,2010
Weather Data from the Bridge
Start time: 0705 (7:05am) End Time: 1708 (5:08 pm) Position:
Line 2 start on eastern end: Latitude = 38o 3.4080 N; Longitude = 123o 10.9800 W
Line 2 end on western end: Latitude = 38o 2.7660 N; Longitude = 123o 33.7800 W
Line 1 start on western end: Latitude = 38o 7.8240 N; Longitude = 123o 31.9200 W
Line 1 end on eastern end: Latitude = 38o 8.3940 N; Longitude = 123o 11.5200 W Present Weather: Cloud cover 100% Visibility: 3‐10 nautical miles Wind Speed: light, variable winds 5 knots or less Wave Height: 0.25 ‐ 1 meter Sea Water Temp: 11.5 C Air Temperature: Dry bulb = 12.1 C Barometric Pressure: 1013.5 mb
Science and Technology Log
From the flying bridge…It was noted that there are unusually high numbers of some animals from Alaska ‐ such as Northern Fulmars. There were also many sightings of humpback whales, one blue whale, numerous California sea lions and Dall’s porpoises. Today was the first sighting of a fin whale recorded on an ACCESS survey. the CTD
Krill
The seas were so calm… with a swell height of 0.25 meters, you could say the ocean looked as calm as a bathtub right before you get in.
With the seas being so calm it was great to work on the back deck (stern) of the boat. Today while working line 2 we deployed the CTD six times and took hoop net samples of zooplankton at 50 meters below the surface. The Tucker trawl was also deployed (put into the water and towed behind the boat) to 200 meters. In the jars of organisms that we sampled from line 2 we found adult and juvenile krill. We found some krill with chlorophyll still in their stomachs.
Sending out the CTD
Two small fish found their way into the hoop net. Myctophid ‐ these fish live deeper during the day and come up towards the surface at night. The scales on the myctophid looked like a colored mirror and are iridescent.
Myctophid
I had the chance to do the water samples today as the CTD was deployed. To do a water sample you throw a bucket over board (attached to the boat with a line). Pull the bucket out of the water and “clean it out” by swirling the water around. Drop the bucket back into the ocean and bring it up to the deck. You then take a small vial that is labeled with the sampling location and rinse it out several times before capping with a lid. It is then placed in the freezer to be analyzed for nutrients by another agency. I was just about to cap the sample and I heard this ‘poof’ sound. I looked over and two humpback whales surfaced just meters away from me. I knew they were humpbacks, a type of baleen whale, because their blow hole is actually two holes. They started to swim off and fluked (raised their tales above the water before diving) just as I was finishing the water sample, how lucky I am to be here!
Humpback Whale
Personal Log Getting My Sea Legs
Okay, I will admit I was seasick the first day. I mean really sick. The sea was rough… 9 foot swell and even with a patch on to combat seas sickness…breakfast came up. I have not been sick again! But tomorrow is another day out at sea!
NOAA Teacher at Sea Log:Deborah Moraga NOAA Ship: Fulmar Cruise Dates: July 20‐28, 2010
Mission: ACCESS (Applied California Current Ecosystem Studies) Geographical area of cruise: Cordell Bank, Gulf of the Farallones and Monterey Bay National Marine Sanctuaries Date: June 21, 2010
The R/V Fulmar
Overview
The R/V Fulmar sets out from the dock early each morning. This ACCESS cruise has 5 members of the scientific team and myself (the NOAA Teacher at Sea.) There are two crew members for a total 8 people onboard.
The three central California National Marine Sanctuaries and the ports where the R/V Fulmar docksApplied California Current Ecosystem StudiesNational Marine Sanctuaries
ACCESS is an acronym for Applied California Current Ecosystem Studies. This is a partnership between PRBO Conservation Science, Cordell Bank National Marine Sanctuary and the Gulf of the Farallones National Marine Sanctuary. These groups of conservation scientists are working together to better understand the impacts that different organisms have on the marine ecosystem off the coast of central California.
Immersion suit for safety
They do this so that policy makers (government groups) have the most accurate data to help them make informed decisions on how the productive waters off the coast can be a resource for us and still protect the wildlife. You can read a more in depth explanation at http://www.accessoceans.org
Flying Bridge
The R/V Fulmar is a 67 foot Marine Grade Aluminum catamaran (a multi hulled vessel.) This vessel can travel 400 miles before refueling and can reach 27 knots (30 miles per hour) with a cruising speed of 22 knots (25.3 miles per hour.) Although that may sound slow compared to the cars we drive… you have to take into account that there can be 10 foot waves to go over out on the ocean.
The Fulmar’s homeport (where the boat ties up to dock most of the time) is in Monterey Bay, CA. For this cruise we will come into port (dock) in Bodega Bay, Sausalito, and Half Moon Bay. Each morning the crew wakes up an hour before the time we start out for the day. They check the oil and look over the engines, start the engines, disconnect the shore power and get the boat ready to sail out for a ten hour day.
Today (July 23, 2010) we left at 0700 (7:00 a.m.) out of Bodega Bay. Bodega Bay is on the coast of Sonoma county, California. It is from Bodega Bay that we will travel offshore to the “lines” that we will be surveying. Today we will survey lines one and two.
Then after the day’s work is done, we will sail into port, tie up to the dock and have dinner. The scientists and crew members sleep on the boat in the berths (bunks) that are located in the hulls of the boat.
Surveys
“Okay, take a survey of the types of pets your classmates have at home. Then create a graph.” How many times have math teachers assigned that assignment and expected that students knew how to survey? Today I received firsthand knowledge of how a survey takes place.
Marine scientist scanning for wildlife
Up on the flying bridge (about 5.5 meters from the surface of the ocean) scientists are surveying birds and marine mammals. There is a protocol that each follows. Here, the protocol is basically a list of agreed upon rules on how to count the marine life seen on the ocean. One researcher inputs the data into a waterproof laptop…imagine chilling at the pool and being able to surf the web! There are other researchers sitting alongside and calling out the types of birds and marine mammals they see. The researchers surveying the birds and mammals use not only their eyes but also binoculars.
Krill collected by the Trucker Trawl
After the researcher spots and identifies the birds or mammals, they call out their findings to the recording scientist in a code like fashion, doing this allows for the data to be inputted faster. The team can travel miles without Krill collected by the Trucker Trawl Researcher recording observations on the flying bridge Pacific White Sided dolphins bow riding seeing any organisms or there may be so many that the scientist at the laptop has a tough time keeping up. In this case the surveying scientist may have to write down their findings and report them when there is a break in the action.
Imagine that you are driving down the highway with your family. You have been asked to count the number humans, cows, horses, goats, dogs, cats, cars or trash on your trip. How would you make sure that your family members didn’t double count and still record all that you see? This is where protocols (instruction/rules) come in. So, let us say that you are behind the driver, and your brother or sister is in the backseat next to the window. There is also a family member in the passenger seat up front (yeah they called ‘shot gun’ before you did.) This is much like the seating arrangement on the flying bridge of the R/V Fulmar.
Researcher recording observations on the flying bridge
So how could you split up the road and area around the road so that you do not count something twice? You could split the area that you see into two parts. Take your left arm and stick it straight out the window. Have your sister/brother stick their right arm out their side window. If we drew an arc from your arm to your sibling’s arm it would be 180 degrees. Of the 180 degree arc, you are responsible for counting everything from your arm to the middle of the windshield. So, you are responsible for 90 degrees and your sibling has the other 90 degrees from the middle of the windshield to their arm.
Pacific White Sided dolphins bow riding
Once you start counting you need to record the data you are collecting. Can you write and count at the same time? Not very well, so we need someone to record the data. There are actually a lot of points of data that you need to enter.
You need to tell the recorder…
• Cue: How did you see the item you are counting?
• Method: Were you searching by eye or using a pair of binoculars?
• Bearing: The angle that the item is from the car as related to the front of the car.
• Reticle: How far the item was from your car when you first observed it (you would use your binoculars for this measurement).
• Which side of the car are you on and who is dong the observing?
• Behavior: What was the organism doing when you spotted it? Was it traveling, feeding or milling (just hanging out)?
Deploying the CTD
You also have to determine the age and sex of the organism. You need to record the species of the organism and how many you observed.
Now that is all for the species above the ground… what would you do for the animals below the road surface? On the R/V Fulmar they collect species from below the surface of the ocean and data about the water. They do this several different ways…
Bringing in the Hoop Net
1. CTD: Conductivity, Temperature, and Depth. This is a tool that records the physical properties of the ocean. It records…
a. Salinity (amount of salt in the water)
b. Temperature (how hot or cold the water is)
c. Depth (how far the instrument travels below the surface)
d. How much chlorophyll is in the water
e. Turbidity (how murky or clear the water is)
f. How much oxygen is in the water
Deploying the Tucker Trawl
2. Hoop Net: Looks like a very heavy hula hoop. Except this hoop has a cone shaped cylinder made of fine mesh attached to it. At the apex of the cone, a small PVC container, called a cod end, is attached. Zooplankton (tiny swimming animals) and some phytoplankton (tiny marine plants) are funneled into the cod end of the net as it is towed behind the boat. When the net comes back to the boat, the researchers take off the cod end and use this sample of organisms.
Collecting data from the CTD
3. Tucker Trawl: Is like three hoop nets attached together. The cool thing about this big net is that the scientists can close each net at different depths. As Map of the transect lines Retrieving the Hoop Net Phytoplankton Net the net is towed behind the boat they “close” each net to capture zooplankton at different depths. The tucker trawl is used primarily to collect krill
Map of the transect lines
Transects
Have you ever lost something in your room? Perhaps it was your homework? The bus is coming and you have to find your binder. So you start tearing your room apart. By the time the bus is five minutes away… you room looks like a disaster and you can’t remember where exactly you have looked and yet, still no binder.
Imagine a group of scientists 30 miles offshore, doing that same type of “looking” for organisms, with the captain piloting (driving) the boat any which way. Just like your binder that was missed when you were looking for it, number and location of organisms in parts of the ocean would be missing from the data set.
Retrieving the Hoop Net
So if you wanted a systematic way to look for your homework that is lost in your room, you would imagine a grid. You would have lines running from one wall to another. These lines would be parallel to each other. You would walk along the line looking for you binder. When you came to the end of the line (at your wall) you would then start on another line. By walking back and forth in your room in this systematic way, you will not miss any part of your room.
Phytoplankton Net
You have just traveled along a transect line. A transect is a path you travel and as you do you are counting and recording data. On the R/V Fulmar, scientists are counting birds, marine mammals, and collecting krill. By counting how many and what kinds of organisms are along the transect line, scientists will be able to calculate the density of organisms in a given area. There are several different types on lines that we survey. There are the near shore transects…which extend 12 kilometers from the shore (that is as long as running back a forth a football field 131 times). Offshore lines are 50 to 60 kilometers from the coast. Imagine how many football fields that would be!
Bow of R/V Fulmar
Density… Take your right hand and put it in your right front pocket of your pants and pull out all the coins you have in your pocket. Looking down at your hand you count 10 dimes. Now do the same for your left hand. You found you have two dimes. The “area” those coins were located is equal… meaning your pockets are the same size. The density of coins in your pockets is greater in your right pocket because there are more coins per square inch than in your left pocket.
Humpback Whale
The researchers on the ACCESS cruise use the data they have collected out in the field (in this case the field is the three central California National Marine Sanctuaries) to calculate the density of the organisms they are researching. They are counting and recording the number of organisms and their location so they can create graphs and maps that show the distribution of those organisms in the waters off the coast.
Taking a surface water sample
Why do they need this information? The data starts to paint a picture of the health of the ecosystem in this part of the world. With that information, they can make suggestions as to how resources are used and how to protect the waters off the California coast. By using data that has been collected over many years, suggestions can be made on how the ocean can still be utilized (used) today while insuring that future generations of humans, marine mammals, birds and krill have the same opportunities.
NOAA Teacher at Sea Tanya Scott Onboard NOAA Ship Miller Freeman June 16 – 21, 2010
Mission: Ecology of Juvenile Fishes Geographical Area: Central Oregon/Washington Coast Current Location: 35 miles offshore, steaming to Seattle, WA Date: Sunday, June 20, 2010
Today is my last full day aboard the Miller Freeman. It is currently 4:00 pm and I have just woken up! I find that being on a ship rocks me to sleep. Or, could it be that I was up until 6:00 am this morning? Either way, I am fully rested and ready to rinse and store all of the scientific equipment in preparation for our departure tomorrow morning. We are currently steaming towards Seattle, Washington where we will depart the ship.
Our work on Saturday turned out to be very interesting. While pulling the midwater trawl, a small pod of Pacific Whitesided dolphin became interested in our tow. They swam very close to the net for a time and had everyone worried that they may become entangled. Luckily, they lost interest and swam away. If they had become entangled in the net there are many protocols that would have been implemented. The marine mammal stranding unit in Washington would have been called, a representative would have been sent to meet the ship, and many photographs taken as documentation. It is always a concern that marine mammals may become entangled in nets but fortunately, this time was not one of those cases.
Krill brought in from the midwater trawl.
The catches from our midwater trawl brought up the familiar species of krill, purple lanternfish, rockfish, and hake. Since the depth of this trawl does not target adult fish, we have been dealing almost exclusively with juvenile and larvae fish. Our last haul produced more larvae rockfish than usual, which is good for the scientists conducting this survey. They are, however, trying to determine where the largest concentrations of juvenile rockfish are during the season. Rockfish are an important species in the Pacific Northwest. It would be easy for you to think of how important flounder are in our area. Rockfish are harvested for sale in fish markets and therefore are threatened by over harvesting. It is important to monitor their movement and habitat in order to determine when and where Pacific Hake regulations should be put in place. Another commercially important species is the Pacific Hake. This fish is deboned and sold as fish sticks in the grocery store. I’m sure that most of you have eaten a Pacific Hake and didn’t even know. These fish are commonly caught by fisherman and, just as the rockfish, their populations are threatened by over harvesting. When Pacific Hake are caught in the midwater trawl, their length is measured, recorded, and the fish are returned to the ocean. All of the data collected by the scientist involved in this study will help to ensure the survival of these commercially viable species. More importantly, keeping their populations stable will mean that the food web remains intact. Just as we have discussed in class many times, everything on earth has its place. Something else always depends on it for food, shelter, survival, and well being.
Pacific Hake
Since today is the last full day on board we will be preparing the equipment for transport back to Newport, Oregon. It is important that everything is rinsed with freshwater to prevent corrosion. After being rinsed and dried, we will package everything in boxes. Our bunks will be stripped, our lockers emptied, and staterooms cleaned. Although my time on board is coming to an end, I know that I will have many memories and experiences to share with you when I return.
Robert and Kerri deploy the CTDDeploying the Bongo netsThe bongo nets are almost inRetrieving the bongo nets, full of algae and hopefully full of Pollock Larvae
On Saturday, my watch began at 10:00 AM. Two of the scientists, Annette Dougherty and Kevin Bailey have watch from 4 AM until 4 PM. The other two scientists, Tiffany Vance and Steve Porter, have watch from 4 PM until 4 AM. I guess being the teacher they took pity on me and gave me half and half. Before getting to one of the stations, the scientists make sure that everything is ready. They lay out the bongo nets on the deck where they will be used. The bongo nets are two nets that from the top look like bongo drums. (See picture) There is an instrument attached to the bongo nets called a SEACAT that takes conductivity, temperature and salinity measurements during the tow. Inside the lab, buckets, bowls and tweezers are all laid out ready to be used.
As we approach each station, the bridge informs the scientists and survey technicians. The bongo nets have already been readied and are set to be deployed (put into the ocean) from the hero platform. When the OK is given, the nets are lifted by the hydrowinch to a point where they can be maneuvered over the rail and then they are lowered into the water. The nets are lowered until they are at 100 meters or 10 meters off the bottom. As they are lowered, the pilot of the boat keeps the wire at a 45° angle by moving the boat slowly forward. Once the nets reach their maximum depth, they are slowly brought back up again. ( I tried to upload a video showing the deployment and retrieval of the bongo, but it won’t work so I’ll show you the video when I get back.
Pollock larvae under the microscope
When the nets clear the water, they are hosed down to get any organisms into the bottle on the end of the net (called the cod end.) The cod end is then removed and the contents of one net are poured into a bucket for sorting. The contents of the other net are preserved and sent to a lab in Poland where they use instruments to get a very accurate count of the Pollock.
Annette Dougherty and Kevin Bailey in the chem Lab
Inside the chem lab, the contents of the bucket are scooped out and poured little by little into a mixing bowl. We then perform a rough count by removing the very small Pollock larvae and any other fish larvae and put them into a petri dish with cold water (the petri dish is placed on top of ice.) They are only a few mm long (averaging between 6-10mm.) Once we have gone through the entire contents, the Pollock larvae are counted, photographed and the length measured. They are then placed into a labeled vial with 95% ethanol. The other fish larvae are placed in a separate vial in 100% ethanol. They are kept in case another scientific team needs the data. The Pollock larvae will be sent to the scientists’ lab back in Seattle where they will perform further analysis on them. I’ll tell you more about that in the next blog.
Answers to your questions:
Annalise – The ship travels at 12 knots when we are going between stations.
Abandon Ship drill – You need to know how to put on your survival suit
Matt T– The ship is very safe. Drills are conducted every week. My first day on the ship, we had a fire drill and abandon ship drill. (See photo of me in my survival suit.)
Dan – The Oscar Dyson observes and records a number of environmental conditions. The bridge takes weather readings every hour and keeps them in a weather log. These include wind direction, wind speed, seawater temperature, air temperature, air pressure, cloud cover, sea swell height and direction. Conditions in the water are also constantly monitored such as temperature, conductivity, salinity, and amount of oxygen.
Olivia – The bongo tow is one way to get fish eggs. The mesh used on the bongo nets is very fine). It is able to filter out these very small larval fish and fish eggs, too.
Brittany – There is no specific number of fish that need to be caught for this experiment. Part of the experiment is to see how many larval fish there are. For our rough count, the scientists measure 20 larvae to get an estimate of their size. They will then look at the otoliths (small inner ear bones) to estimate their age.
Euphausid – KrillCopepod
Amy – Aside from the Pollock larvae in the nets, we have caught cod larvae, larval squid, fish eggs, amphipods, terapods, jellies, Euphausids or krill, copepods and the larvae of other fish. The nets are small enough that we don’t catch any large fish or other animals.
Josh W. and Jon – Joel Kellogg has the night shift, so I haven’t met him yet. Stephen Macri is not on this cruise so I can’t ask him your questions.
Questions for today
In your answers to the last blog, many of you researched the large animals that live here in the Gulf of Alaska. The most abundant organisms, however, are much smaller. Two organisms that are very important to the survival of the large animals here are copepods and Euphausids. The larval Pollock feed on the larval copepods that are called copepodites.
Find out what other animals feed on copepods and euphausids. Then, describe at least one food chain that includes copepods and one that includes krill. In your food chain start with a producer or autotroph Ex. Algae) and end with the highest level of consumer or predator (Ex. blue Whale)
Again, Please be sure to include the link to the website where you got your information. Answer the questions in your own words writing complete sentences with as much detail as you can.
Today I was able to see a different type of equipment deployed. It is called a CTD (conductivity temperature depth). The CTD went down 150 meters. On the metal frame that holds the CTD are 12 water bottles with caps at each end. The frame is lowered with both end caps open.
Once at its depth the end caps are closed to take a water sample. This is then repeated at 5 different depths on its return to the surface. The water is then put into plastic containers of known volume, which are then taken to a filter (about the size of a quarter) that separates the microscopic plants called phytoplankton from the seawater. The filters with the phytoplankton are then frozen in small plastic vials to be sent to a lab in Seattle where they determine how much chlorophyll was on each filter. The amount of chlorophyll tells us how much phytoplankton was in the water at each depth. Another water sample taken from the CTD is to verify the salinity values measured by the CTD. We haven’t found much pollock the last few hauls. We are now finding Pacific cod, and of course krill and arthropods such as copepods, amphipods, barnacle nauplii. Amber spotted a Minke whale this morning. I hope to see one soon!
