Valerie Bogan: The Journey Ends, June 20, 2012

NOAA Teacher at Sea
Valerie Bogan
Aboard NOAA ship Oregon II
June 7 – 20, 2012

Mission: Southeast Fisheries Science Center Summer Groundfish (SEAMAP) Survey
Geographical area of cruise: Gulf of Mexico
Date
: Wednesday June 20, 2012

Weather Data from the Bridge:
Sea temperature 28  degrees celsius, Air temperature 26.4 degrees celsius.

 Science and Technology Log:

Well we have come to the end of the cruise so now it is time to tie it all the pieces together.  The Gulf of Mexico contains a large ecosystem which is made up of both biotic (living) and abiotic (nonliving) factors.  We studied the abiotic factors using the CTD which records water chemistry data and by recording information on the water depth, water color, water temperature, and weather conditions.  We studied the living portions of the ecosystem by collecting plankton in the bongo and neuston nets.  The health of the plankton depends on the abiotic factors such as water temperature and water clarity so if the abiotic factors are affected by some human input then the plankton will be unhealthy.  The trawl net allowed us to collect some larger organisms which occupy the upper part of the food web.  Some of these organisms eat the plankton while others eat bigger creatures which are also found in the trawl net.  Despite what they eat all of these creatures depend on the health of the levels below them either because those levels are directly their food or because those levels are the food of their food.

The Gulf of Mexico Ecosystem
An illustration of how the food web in the gulf works. (picture from brownmarine.com)

The ecosystem of the Gulf of Mexico has taken a couple of large hits in the recent past, first with Hurricane Katrina and then with the Deepwater horizon oil spill.  When an ecosystem has undergone such major events it is important to monitor the species in order to determine if there is an effect from the disasters.  Hurricane Katrina left its mark on the people of the Gulf coast but did minimal damage to the biotic parts of the ecosystem.  The effects of the deepwater horizon oil spill are still unknown due to the scope of the spill.

Today’s portion of the ship is the engine room.  I was recently taken on a tour of the engine room by William.  The ship is powered by two diesel engines which use approximately 1,000 gallons of fuel per day.  The ship obviously uses the engines to move from location to location but it also uses the energy to power generators which supply electrical energy, to air condition the ship and to make fresh water out of sea water.

The engines.
The twin diesel engines.
Generators
Generators

There are two vital positions on the Oregon II that I have not discussed, deck worker and engineer.  We could never have collected the samples that we did without the immense help of the deck workers.  They operated the winches and cranes that allowed us to deploy and bring back the nets which captured our samples.  The engineers kept the ship’s engines running, the electricity on, and the rooms cool.  Some of these men started out their careers as merchant marines.  A merchant marine is a person who works on a civilian-owned merchant vessel such as a deep-sea merchant ship, tug boat, ferry or dredge.  There are a variety of jobs on these ships so if you are interested in this line of work I’m sure you could find something to do as a career.  A few merchant marines work as captains of those civilian ships, guiding the ship and commanding the crew in order the get the job done.  More of them serve as mates, which are assistants to the captains.  These people are in training to one day become a captain of their own ship.  Just like on the Oregon II there are also engineers and deck workers in the merchant marines.  Engineers are expected to keep the machinery running while the deck workers do the heavy lifting on the deck and keep the ship in good condition by performing general maintenance.

During this cruise I have met a lot of people who have different jobs all of which are related to collecting scientific data.  The bridge is wonderfully staffed by members of the NOAA Corps.  These men and women train hard to be able to sail research ships around the world.  To find out more about a profession with the NOAA Corps go visit the Corps’ webpage.  There are a large number of scientists on board.  These scientists all specialize in the marine environment and there are many wonderful universities which offer degrees for this field of study.  Go here to get some more information on this scientific pursuit.  The engineers and deck crew keep the ship running. To learn about these professions go to The United States Merchant Marines Academy.  The stewards are instrumental in keeping the crew going on a daily basis by providing good healthy meals.  To learn more about working as a steward read about the Navy culinary school.  The ship could not continue to operate without each of these workers.  Nobody is more or less important than the next–they survive as a group and if they cannot work together the ship stops operating.

Personal Log

Well my journey has come to an end and it is bitter-sweet.  While I’m happy to be back on land, I’m sad to say goodbye to all of the wonderful people on the Oregon II.  When I was starting this adventure I thought two weeks was going to be a long time to be at sea, yet it went by so fast.  Although I’m tired, my sleep and eating schedule are all messed up, and I have some wicked bruises, I would do it again.  I had a great time and in a couple of years I have a feeling I will be once again applying for the Teacher at Sea Program.

It should be no surprise to those that know me best that I love animals which is why I volunteer at the zoo and travel to distant locations to see animals in the wild.  So my favorite part of the trip was seeing all the animals, both those that came out of the sea and those that flew to our deck.  So I’m going to end with a slide show of some amazing animals.

Pelican.
This pelican decided to stop and visit with us for a while.
angel shark
An angel shark
Moray eel
A moray eel
Bat fish
Two bat fishes of very different sizes.
Sand dollar
A sand dollar
Hitchhikers
A group of sea birds decide to hitch a ride for a while.

Laura Rodriguez, May 24th, 2010

NOAA Teacher at Sea
Laura Rodriguez
Aboard NOAA Ship Oscar Dyson
May 24 – June 2, 2012

Mission: Fisheries Surveys
Geographical Area: Eastern Bering Sea
Date: May 24, 2010

Pollock Survey Begins

Robert and Kerri deploy the CTD
Deploying the Bongo nets
The bongo nets are almost in
Retrieving the bongo nets, full of algae and hopefully full of Pollock Larvae

On Saturday, my watch began at 10:00 AM. Two of the scientists, Annette Dougherty and Kevin Bailey have watch from 4 AM until 4 PM. The other two scientists, Tiffany Vance and Steve Porter, have watch from 4 PM until 4 AM. I guess being the teacher they took pity on me and gave me half and half. Before getting to one of the stations, the scientists make sure that everything is ready. They lay out the bongo nets on the deck where they will be used. The bongo nets are two nets that from the top look like bongo drums. (See picture) There is an instrument attached to the bongo nets called a SEACAT that takes conductivity, temperature and salinity measurements during the tow. Inside the lab, buckets, bowls and tweezers are all laid out ready to be used.

As we approach each station, the bridge informs the scientists and survey technicians. The bongo nets have already been readied and are set to be deployed (put into the ocean) from the hero platform. When the OK is given, the nets are lifted by the hydrowinch to a point where they can be maneuvered over the rail and then they are lowered into the water. The nets are lowered until they are at 100 meters or 10 meters off the bottom. As they are lowered, the pilot of the boat keeps the wire at a 45° angle by moving the boat slowly forward. Once the nets reach their maximum depth, they are slowly brought back up again.  ( I tried to upload a video showing the deployment and retrieval of the bongo, but it won’t work so I’ll show you the video when I get back.

Pollock larvae under the microscope

When the nets clear the water, they are hosed down to get any organisms into the bottle on the end of the net (called the cod end.) The cod end is then removed and the contents of one net are poured into a bucket for sorting. The contents of the other net are preserved and sent to a lab in Poland where they use instruments to get a very accurate count of the Pollock.

Annette Dougherty and Kevin Bailey in the chem Lab

Inside the chem lab, the contents of the bucket are scooped out and poured little by little into a mixing bowl. We then perform a rough count by removing the very small Pollock larvae and any other fish larvae and put them into a petri dish with cold water (the petri dish is placed on top of ice.) They are only a few mm long (averaging between 6-10mm.) Once we have gone through the entire contents, the Pollock larvae are counted, photographed and the length measured. They are then placed into a labeled vial with 95% ethanol. The other fish larvae are placed in a separate vial in 100% ethanol. They are kept in case another scientific team needs the data. The Pollock larvae will be sent to the scientists’ lab back in Seattle where they will perform further analysis on them. I’ll tell you more about that in the next blog.

 

Answers to your questions:

Annalise – The ship travels at 12 knots when we are going between stations.

Abandon Ship drill – You need to know how to put on your survival suit

Matt T– The ship is very safe. Drills are conducted every week. My first day on the ship, we had a fire drill and abandon ship drill. (See photo of me in my survival suit.)

Dan – The Oscar Dyson observes and records a number of environmental conditions. The bridge takes weather readings every hour and keeps them in a weather log. These include wind direction, wind speed, seawater temperature, air temperature, air pressure, cloud cover, sea swell height and direction. Conditions in the water are also constantly monitored such as temperature, conductivity, salinity, and amount of oxygen.

Olivia – The bongo tow is one way to get fish eggs. The mesh used on the bongo nets is very fine). It is able to filter out these very small larval fish and fish eggs, too.

Brittany – There is no specific number of fish that need to be caught for this experiment. Part of the experiment is to see how many larval fish there are. For our rough count, the scientists measure 20 larvae to get an estimate of their size. They will then look at the otoliths (small inner ear bones) to estimate their age.

Euphausid – Krill
Copepod

Amy – Aside from the Pollock larvae in the nets, we have caught cod larvae, larval squid, fish eggs, amphipods, terapods, jellies, Euphausids or krill, copepods and the larvae of other fish. The nets are small enough that we don’t catch any large fish or other animals.

Josh W. and Jon – Joel Kellogg has the night shift, so I haven’t met him yet. Stephen Macri is not on this cruise so I can’t ask him your questions.

 

Questions for today

In your answers to the last blog, many of you researched the large animals that live here in the Gulf of Alaska. The most abundant organisms, however, are much smaller. Two organisms that are very important to the survival of the large animals here are copepods and Euphausids. The larval Pollock feed on the larval copepods that are called copepodites.

Find out what other animals feed on copepods and euphausids. Then, describe at least one food chain that includes copepods and one that includes krill. In your food chain start with a producer or autotroph Ex. Algae) and end with the highest level of consumer or predator (Ex. blue Whale)

 

Again, Please be sure to include the link to the website where you got your information.  Answer the questions in your own words writing complete sentences with as much detail as you can.

Kathy Schroeder, May 7, 2010

NOAA Teacher at Sea
Kathy Schroeder
Aboard NOAA Ship Oscar Dyson
May 5 – May 18, 2010

Mission: Fisheries Surveys
Geographical Area: Eastern Bering Sea
Date: May 7, 2010

Bongo Nets

Bongo Nets
Bongo Nets

Here are two pictures of the Bongo Nets. I am holding the canister that collects the samples, which is then removed to sort through or store the samples. The other picture shows the two different sizes as it is about to be lowered into the cold water.

Me with the bongo nets
Me with the bongo nets

Kathy Schroeder, May 6, 2010

NOAA Teacher at Sea
Kathy Schroeder
Aboard NOAA Ship Oscar Dyson
May 5 – May 18, 2010

Mission: Fisheries Surveys
Geographical Area: Eastern Bering Sea
Date: May 6, 2010

Out at Sea!


We left Dutch Harbor at 9pm on May 5th. I went to the bridge (where the Captain pilots the ship), which is 4 decks higher than where I sleep, and watched us depart. On our way out through the pass we passed a volcano. A scientist, Brian, works on the bridge watching birds. He has great binoculars and let me borrow them. I got to see my first Puffin! The sunset at 1030pm was gorgeous! Woke up 7 hours later to get to work. My shift will change, but for now it will be 7a-7p or 9a-9m. Began the day with a fire drill! Got to put on my survival suit! Now it was time to get back to work. I put on my orange suit (called a float coat) and went on the starboard side of the ship to help with releasing the tows. The first is the Neuston tow. It looks like a rectangular metal box with a net attached and a cylinder tube at the end. It collects plankton from the surface of the ocean. The tow stays at a 45 degree angle for 10 minutes and then is pulled onboard. We take the collection and put it in a quart size glass jar. On average, it is not very full. We then add sea water and formalin to preserve the specimens. Then we release the Bongo nets. They look just like two pairs of bongo drums, one large and one small.There are four circles (two different sizes) attached to nets and then connected to the collection containers (cups at the bottom of the net). They go down 300 meters or 10 feet off the bottom, and are then pulled back up. This takes over 30 minutes. (During this time a Laysan Albatross came along side the ship, and just wanted to hang out with us!) Once the nets are pulled in, three containers are preserved. We take the last container and sift through it using tweezers to pull out any larval fish (mostly pollock) and put them in a glass petri dish on ice. They are then taken to the microscopes and looked at closely for classification. Some are flash frozen on slides, others are individually preserved in alcohol. My best find last night was a squid the size of a tic-tac! After 14 hours of work it was time for me to go to bed. It was great waking up to so many messages and emails. Keep them coming. And for the questions-NO! I have not been sick 🙂